Team:Thessaloniki/Attributions

Attributions

Attributions

Every aspect of our project was carried out exclusively from members of iGEM Thessaloniki, unless otherwise stated.

We would like to thank those who helped this project come to fruition. Listed below are the attributions of those that assisted us along the way.

Primary Investigators

  • Professor George Mosialos (Department of Genetics, Development and Molecular Biology, School of Biology, AUTh)
  • Associate Professor Ioannis Vizirianakis (Department of Pharmacognosy/Pharmacology, School of Pharmacy, AUTh) for giving us permission to work in their laboratory and for their valuable advice on project related issues.

Advisors

  • Androulla Miliotou, (AUTh), for teaching us some basic laboratory techniques (e.g. agarose gel electrophoresis, PCR reaction, plating). She also provided us with the INVαF’ and C43 (DE3) E. Coli strains.
  • Stefanos Tsiftsoglou, PhD, for his advice on our presentation and wiki structure.
  • Maxim Gavriilidis, (AUTh) for his advice on laboratory procedures.
  • Ilias Dimitriadis, for his help on the sensitivity analysis of our models.

Lab & Project Development Support

  • Professor George Mosialos’ Lab, for providing us with the XL1-Blue E. coli strains.
  • Professor Christos Panagiotidis (Department of Pharmacognosy/Pharmacology, School of Pharmacy, AUTh) for giving us permission to use his PCR machine.
  • Lefkotha Papadopoulou, Assistant Professor, for giving us permission to work in her laboratory.
  • Associate Professor Chlichlia Katerina (MBG, DUTH) and Associate Professor Aglaia Pappa (MBG, DUTH), for giving us permission to use her PerkinElmer EnSpire Multimode Plate Reader for our InterLab measurements.
  • Professor Howard Salis (Penn State University), for his advice on the design of our theophylline riboswitch.
  • Thomas H. Segall-Shapiro (Massachusetts Institute of Technology), PhD, for his valuable input on our project design and his advice on the flow cytometry measurements.
  • Stamatios Damalas (University of Wageningen), for sharing with us some of his protocols and his Metabrick platform.
  • Esteban Martínez , (Centro Nacional de Biotecnología-CSIC), PhD, for sending us the Tn7 transposition strains and plasmids.
  • iGEM Greece 2017, for providing with our first laboratory materials and giving us their advice throughout the course of the Competition.
  • Kritikos Dimitrios for providing us with the Rainbow Calibration Particles RCP-30-5A for the calibration of our flow cytometer.

Model Support

  • Psomopoulos E.Fotis, (EKETA) for his advice on simulation of biological networks.
  • Tefas Anastasios, (AUTh), for his advice on parameters optimization for our systems.

Human Practices

  • Dr Jasna Puizina (University of Split), Dr Dragana Savic and Dr Velimir Mladenov (University of Novi Sad), Dr Enisa Omanovic-Miklicanin, Dr Aleksandra Nikolic and Dr Alen Mujcinovic (University of Sarajevo), Dr Tijana Cvetic Antic (University of Belgrade) Dr Stavroula Mavrogeni (University of Macedonia) and everyone else involved in the organization of the “SynBalkans Tour”
  • iGEM Teams: ETH Zurich 2017, IONIS PARIS 2017, Exeter 2017, TUDelft 2017. We want to acknowledge these teams from last year’s iGEM Competition, as we showed their work as exemplary projects of synthetic biology’s applications during our “SynBalkans Tour”.
  • Dr Takis Vidalis, Doctor of Law, for the evaluation of our project and our discussion about bioethics and legislation.

General Support

  • “Just Print It” and Vasilis Somatidis for creating our logos
  • Eleftherios Markidis and Panagiotis Platsikas for taking our Team Photos.
  • Ioannis Giannoulas and Konstantinos Arzoumanidis for driving us for more than 2000 kilometers in the Balkan Peninsula.

Wiki Libraries

  • Vue.js: For the awesome Javascript reactive template engine
  • Quasar Framework: For the full featured and elegand UI toolkit
  • KateX: For the easy-to-install LateX parser
  • echarts: For our complex graphs
  • plotly: For our simple graphs
  • leafletjs: For our maps in the “SynBalkans"
  • lodash: A powerful Javascript library
  • GSAP: A powerful Javascript animation library