(Prototype team page) |
Wangzhihao (Talk | contribs) |
||
Line 1: | Line 1: | ||
{{Jiangnan_China}} | {{Jiangnan_China}} | ||
− | <html> | + | <html lang="en"> |
+ | <body style="background-color: #ccc"> | ||
+ | <nav class="site-header py-2" style="position: fixed;width: 100%;z-index: 999"> | ||
+ | <div class="container d-flex flex-column flex-md-row justify-content-between" style="max-width: 1300px;"> | ||
+ | <a class="navbar-brand" href="#"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/8/84/T--jiangnan_china--home--icon-logo.png" width="36px" height="36px"> | ||
+ | </a> | ||
+ | <a class="nav-link py-2 d-none d-md-inline-block" href="https://2018.igem.org/Team:Jiangnan_China"><i class="fa fa-home"></i> Home</a> | ||
+ | <div class="dropdown"> | ||
+ | <a class="nav-link dropdown-toggle" href="#" id="navbarDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false"> | ||
+ | <i class="fa fa-group"></i> Team | ||
+ | </a> | ||
+ | <div class="dropdown-menu" aria-labelledby="navbarDropdown"> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/TeamMembers">Team Members</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Sponsors">Sponsors</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Attributions">Attributions</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Collaborations">Collaborations</a> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="dropdown"> | ||
+ | <a class="nav-link dropdown-toggle" href="#" id="projectDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false"> | ||
+ | <i class="fa fa-project"></i> Project | ||
+ | </a> | ||
+ | <div class="dropdown-menu" aria-labelledby="projectDropdown"> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Description">Description</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Design">Design</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Experiments">Experiments</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Notebook">Notebook</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Protocols">Protocols</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Results">Results</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Demonstrate">Demonstrate</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Model">Model</a> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="dropdown"> | ||
+ | <a class="nav-link dropdown-toggle" href="#" id="projectDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false"> | ||
+ | <i class="fa fa-bell"></i> Safety | ||
+ | </a> | ||
+ | <div class="dropdown-menu" aria-labelledby="projectDropdown"> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Safety">Training</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Safety#Protection">Protection</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Safety#Material">Material</a> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="dropdown"> | ||
+ | <a class="nav-link dropdown-toggle" href="#" id="partsDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false"> | ||
+ | <i class="fa fa-composer"></i> Human Pactices | ||
+ | </a> | ||
+ | <div class="dropdown-menu" aria-labelledby="partsDropdown"> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Human_Practices">Silver_Human Pactices</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Human_Practices#gold">Gold_Human Pactices</a> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="dropdown"> | ||
+ | <a class="nav-link dropdown-toggle" href="#" id="partsDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false"> | ||
+ | <i class="fa fa-trophy"></i> Awards | ||
+ | </a> | ||
+ | <div class="dropdown-menu" aria-labelledby="partsDropdown"> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Awards">Bronzes</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Awards#Silver">Silver</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Awards#Gold">Gold</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Awards#Prizes">Prizes</a> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="dropdown"> | ||
+ | <a class="nav-link dropdown-toggle" href="#" id="partsDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false"> | ||
+ | <i class="fa fa-part"></i> Parts | ||
+ | </a> | ||
+ | <div class="dropdown-menu" aria-labelledby="partsDropdown"> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Parts">Basic Parts</a> | ||
+ | <a class="dropdown-item" href="https://2018.igem.org/Team:Jiangnan_China/Parts#Composite">Composite parts</a> | ||
+ | </div> | ||
+ | </div> | ||
− | < | + | <a class="nav-link py-2 d-none d-md-inline-block" href="https://2018.igem.org/Team:Jiangnan_China/InterLab"><i class="fa fa-interlab" aria-hidden="true"></i> InterLab</a> |
− | + | ||
− | < | + | |
− | </ | + | |
+ | </div> | ||
+ | </nav> | ||
− | < | + | <main class="content-wrap"> |
+ | <img src="https://static.igem.org/mediawiki/2018/6/61/T--jiangnan_china--results--1.jpg" width="100%"> | ||
+ | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
+ | |||
+ | <div class="dcpt3" style="font-size:20px;line-height:1.5;font-family: 'spr';margin-top:-1px; "> | ||
+ | |||
+ | <br> | ||
+ | Through genomic mutation and high-throughput screening, we obtained a strain <span class="font-italic">L. lactis</span> WH101 with good acid resistance at pH 5.0 from 35,000 strains. Next, we compared the NZ9000 and WH101 by transcriptomics analysis and mathematical model and obtain key acid resistant components—<span class="font-italic">msmK</span> gene.<br> | ||
+ | The survival rate of <span class="font-italic">L.lactis</span> NZ3900/pNZ8149-<span class="font-italic">msmK</span> and <span class="font-italic">L.lactis</span> NZ3900/pNZ8149 in acid stress result shows that <span class="font-italic">msmK</span> is an effective anti-acid gene, which can make the recombinant strain has 213-flood higher survival rate than parent one after 3 hours at pH 4.0.<br><br> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/6/68/T--jiangnan_china--wet--5.png" width="80%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 1</strong> Number of colonies at acid stress (pH 4.0).</div> | ||
+ | <br> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/0/0f/T--jiangnan_china--wet--6.png" width="60%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 2</strong> Survival rate at acid stress (pH 4.0).</div><br> | ||
+ | |||
+ | As for the composite part <span class="font-italic">msmK</span>-<span class="font-italic">cspD2</span>,The strain <span class="font-italic">Lactococcus lactis</span> NZ3900/pNZ8149-<span class="font-italic">msmK</span>-<span class="font-italic">cspD2</span> and <span class="font-italic">Lactococcus lactis</span> NZ3900/pNZ8149 were tested for acid resistance and cold resistance.<br><br><br> | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | <div class=" | + | <strong><font size="5">Acid resistance</font></strong><br><br> |
+ | |||
+ | Deal with the samples under pH 4.0 with nisin as an inducer.<br> | ||
+ | <br> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/6/62/T--jiangnan_china--wet--7.png" width="80%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 3</strong> Number of colonies at acid stress (pH 4.0).<br><br></div> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/7/71/T--jiangnan_china--wet--8.png" width="60%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 4</strong> Survival rate at acid stress (pH4.0).<br><br></div> | ||
+ | The result shows that composite part can make the recombinant strain has 243-fold higher survival rate than parent one under acid stress.<br> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/9/9f/T--jiangnan_china--wet--9.png" width="60%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 5</strong> Electron microscopy of <span class="font-italic">L.lactis</span> NZ3900/pNZ8149-<span class="font-italic">msmk-cspD2-gfp</span> and <span class="font-italic">L.lactis</span> NZ3900/pNZ8149 before and after acid stress.<br><br></div> | ||
+ | Before the acid stress, the cell structure of the control strain and the recombinant strain remained intact. After 3 h of pH 4.0 stress, the cell membrane thickness became thinner and the surface became rough, and the cell membrane of some control strains ruptured. In comparison, the cell structure of the recombinant strain remains more intact, thereby effectively reducing the damage caused by acid stress on the cells.<br><br> | ||
+ | <strong><font size="5">Cold resistance </font></strong><br> | ||
+ | <span class="font-italic">L.lactis</span> NZ3900/pNZ8149-<span class="font-italic">msmk-cspD2-gfp</span> and <span class="font-italic">L.lactis</span> NZ3900/pNZ8149 strains were inoculated with 4% inoculation. When cultured at 30 °C for 2.5 h (OD=0.35), add 0, 0.5 ng/mL of Nisin, and then culture for 8 ∼ 10 h (OD=0.8), centrifuge at 4000 r/min. Resuspend them in the same volume of fresh M17 medium and count the number of colonies. Four freeze-thaw stimulations were performed on all samples by 1 mL of the sample after counting, and placed in a refrigerator at −20 °C to cool rapidly, frozen for 24 h, then slowly frozen at 4 min and 30 °C. Count separately and calculate the survival rate.<br><br> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/f/fb/T--jiangnan_china--wet--10.jpg" width="50%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 6</strong> The Comparison curve of survival rate under cold stress.<br><br></div> | ||
+ | After 4 consecutive repeated freeze-thaw tests, the recombinant strain was 47.5 times more viable than the control strain, indicating the antifreeze survival rate of the strain with increased overexpression of <span class="font-italic">cspD2</span>.<br><br> | ||
+ | <div align="center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/b/b7/T--jiangnan_china--wet--11.png" width="60%" > | ||
+ | </div> | ||
+ | <div style="text-align:center;"><strong >Fig 7</strong> Electron microscopy before and after repeated freezing and thawing.<br><br></div> | ||
+ | Before freezing and thawing, the cell structure of the control strain and the recombinant strain remained intact. After repeated freezing and thawing for 4 times, the cell membrane of the cell became thin and rough, and some intracellular substances overflowed. In comparison, the cell structure of the recombinant strain remains more intact, and the damage of the cell membrane is alleviated, thereby effectively reducing the damage caused by freezing stress on the cells.<br> | ||
+ | |||
+ | |||
+ | <br> | ||
+ | </div> | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | + | ||
+ | |||
+ | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
+ | </main> | ||
+ | <footer class="py-4"> | ||
+ | <div class="container" style="text-align: center;"> | ||
+ | <a href="http://www.jiangnan.edu.cn/" title="江南大学"><img src="https://static.igem.org/mediawiki/2018/1/1d/T--jiangnan_china--jiangnanlogo.png"></a> | ||
+ | <a href="http://biotech.jiangnan.edu.cn/" title="江南大学生物工程学院"><img src="https://static.igem.org/mediawiki/2018/a/a6/T--jiangnan_china--shenggonglogo.png"></a> | ||
+ | <p>Copyright © jiangnan_China 2018</p> | ||
+ | </div> | ||
+ | </footer> | ||
+ | <a id="gotop" class="animated infinite bounce slow" style="position: fixed; right: 85px; bottom: 148px;display: none"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/f/f8/T--jiangnan_china--logo.png" width="64px" height="64px"> | ||
+ | </a> | ||
+ | <!-- Optional JavaScript --> | ||
+ | <!-- jQuery first, then Popper.js, then Bootstrap JS --> | ||
+ | <script type="text/javascript"> | ||
+ | //页面加载后触发 | ||
+ | window.onload = function(){ | ||
+ | var btn = document.getElementById('gotop'); | ||
+ | var timer = null; | ||
+ | var isTop = true; | ||
+ | //获取页面可视区高度 | ||
+ | var clientHeight = document.documentElement.clientHeight - 500; | ||
+ | |||
+ | //滚动条滚动时触发 | ||
+ | window.onscroll = function() { | ||
+ | //显示回到顶部按钮 | ||
+ | var osTop = document.documentElement.scrollTop || document.body.scrollTop; | ||
+ | if (osTop >= clientHeight) { | ||
+ | btn.style.display = "block"; | ||
+ | } else { | ||
+ | btn.style.display = "none"; | ||
+ | }; | ||
+ | //回到顶部过程中用户滚动滚动条,停止定时器 | ||
+ | if (!isTop) { | ||
+ | clearInterval(timer); | ||
+ | }; | ||
+ | isTop = false; | ||
+ | }; | ||
+ | |||
+ | btn.onclick = function() { | ||
+ | //设置定时器 | ||
+ | timer = setInterval(function(){ | ||
+ | //获取滚动条距离顶部高度 | ||
+ | var osTop = document.documentElement.scrollTop || document.body.scrollTop; | ||
+ | var ispeed = Math.floor(-osTop / 3); | ||
+ | document.documentElement.scrollTop = document.body.scrollTop = osTop+ispeed; | ||
+ | //到达顶部,清除定时器 | ||
+ | if (osTop == 0) { | ||
+ | clearInterval(timer); | ||
+ | }; | ||
+ | isTop = true; | ||
+ | },30); | ||
+ | }; | ||
+ | }; | ||
+ | </script> | ||
+ | </body> | ||
</html> | </html> |
Revision as of 11:27, 16 October 2018
Through genomic mutation and high-throughput screening, we obtained a strain L. lactis WH101 with good acid resistance at pH 5.0 from 35,000 strains. Next, we compared the NZ9000 and WH101 by transcriptomics analysis and mathematical model and obtain key acid resistant components—msmK gene.
The survival rate of L.lactis NZ3900/pNZ8149-msmK and L.lactis NZ3900/pNZ8149 in acid stress result shows that msmK is an effective anti-acid gene, which can make the recombinant strain has 213-flood higher survival rate than parent one after 3 hours at pH 4.0.
Fig 1 Number of colonies at acid stress (pH 4.0).
Fig 2 Survival rate at acid stress (pH 4.0).
As for the composite part msmK-cspD2,The strain Lactococcus lactis NZ3900/pNZ8149-msmK-cspD2 and Lactococcus lactis NZ3900/pNZ8149 were tested for acid resistance and cold resistance.
Acid resistance
Deal with the samples under pH 4.0 with nisin as an inducer.
Fig 3 Number of colonies at acid stress (pH 4.0).
Fig 4 Survival rate at acid stress (pH4.0).
The result shows that composite part can make the recombinant strain has 243-fold higher survival rate than parent one under acid stress.Fig 5 Electron microscopy of L.lactis NZ3900/pNZ8149-msmk-cspD2-gfp and L.lactis NZ3900/pNZ8149 before and after acid stress.
Before the acid stress, the cell structure of the control strain and the recombinant strain remained intact. After 3 h of pH 4.0 stress, the cell membrane thickness became thinner and the surface became rough, and the cell membrane of some control strains ruptured. In comparison, the cell structure of the recombinant strain remains more intact, thereby effectively reducing the damage caused by acid stress on the cells.Cold resistance
L.lactis NZ3900/pNZ8149-msmk-cspD2-gfp and L.lactis NZ3900/pNZ8149 strains were inoculated with 4% inoculation. When cultured at 30 °C for 2.5 h (OD=0.35), add 0, 0.5 ng/mL of Nisin, and then culture for 8 ∼ 10 h (OD=0.8), centrifuge at 4000 r/min. Resuspend them in the same volume of fresh M17 medium and count the number of colonies. Four freeze-thaw stimulations were performed on all samples by 1 mL of the sample after counting, and placed in a refrigerator at −20 °C to cool rapidly, frozen for 24 h, then slowly frozen at 4 min and 30 °C. Count separately and calculate the survival rate.
Fig 6 The Comparison curve of survival rate under cold stress.
After 4 consecutive repeated freeze-thaw tests, the recombinant strain was 47.5 times more viable than the control strain, indicating the antifreeze survival rate of the strain with increased overexpression of cspD2.Fig 7 Electron microscopy before and after repeated freezing and thawing.
Before freezing and thawing, the cell structure of the control strain and the recombinant strain remained intact. After repeated freezing and thawing for 4 times, the cell membrane of the cell became thin and rough, and some intracellular substances overflowed. In comparison, the cell structure of the recombinant strain remains more intact, and the damage of the cell membrane is alleviated, thereby effectively reducing the damage caused by freezing stress on the cells.