Difference between revisions of "Template:SYSU-Software/statics/html/Projects/Improve.html"

 
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   <div class="header3"> SBOL Unification </div>
 
   <div class="header3"> SBOL Unification </div>
 
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     As we all know, SBOL language is considered as an officially standard language in iGEM. Therefore, if we can unify
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     SBOL is an open standard for the representation of in silico biological designs. Considering the powerful features of SBOL, it's viable to merge data from different databases into a consolidated database supported by SBOL, which will bring great efficiency and convenience to the communication among synthetic biologists. CO-RAD is a perfect software compitable of SBOL, where users can import and export data in format of SBOL.
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    data from different databases into SBOL language, it will make the communication between synthetic biologists more
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    convenient and efficient. And our software adds the import and export of SBOL form, which improves the
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    practicability of our software.
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  <div class="header3"> Real-time Collaboration </div>
 
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    Compared to traditional software such as SBOL designer, which can help users design circuits in a SBOL form but
 
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    difficult to achieve efficient interflow when they meet with some trouble in their design, we create a real-time
 
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    collaboration platform, making synthetic biologists communicate with remote partners like face to face. And we
 
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    believe real-time collaboration can offer the users a better experience when they design circuits.
 
 
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   <div class="header3"> CG value and CAI </div>
 
   <div class="header3"> CG value and CAI </div>
 
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     Last year we only proceeded the analysis of sequences and didn't evaluate circuits the users designed. And this
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     Last year the work of SYSU-Software only proceeded the analysis module of sequences, but it can't evaluate the circuits that the users designed. This year we want to provide the users with CG value and CAI about their circuits, helping adjusting and improving their circuits. We have to point out that, it is not enough to make a comprehensive assessment on circuits by only CG value and CAI, yet these two parameters are still appropriate references, for they are closely related to the expression level of the product.
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    year we want to provide the users with CG value and CAI about their circuits to remind the users to make some
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    adjustment, in order to improve the circuits. Although it's not comprehensive to assess circuits only by CG value
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    and CAI, however, these two parameters are closely related to the expression level of the product, which makes the
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    evaluation have certain reference significance.
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   <div class="header3"> Protocol </div>
 
   <div class="header3"> Protocol </div>
 
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     In previous projects of our team, we didn't have the function of editing protocols. And for the convenience of
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     Previous projects of our team is not available for editing protocols. For the convenience of interaction, we add this function to CO-RAD, with which protocols can be easily edited and authorized users are able to view/comment protocols of others designs.
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    interaction, we add this function to our software. Additionally, it contributes to find the possible problems
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    existed in protocols.
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Latest revision as of 17:46, 17 October 2018

Projects
Improvement
SBOL Unification 
   SBOL is an open standard for the representation of in silico biological designs. Considering the powerful features of SBOL, it's viable to merge data from different databases into a consolidated database supported by SBOL, which will bring great efficiency and convenience to the communication among synthetic biologists. CO-RAD is a perfect software compitable of SBOL, where users can import and export data in format of SBOL.
Advanced Toolkit
   Compared to traditional software such as SBOL Designer that is difficult to achieve efficient interflow when they
   have problems with their designs, CO-RAD offers a synchronization sketchpad for synthetic biologists to communicate
   with their remote partners. The embedded management studio is another reliable assistant for your circuit designs.
   We believe all these advanced toolkit will rid the tedious process of circuit designing.
CG value and CAI 
   Last year the work of SYSU-Software only proceeded the analysis module of sequences, but it can't evaluate the circuits that the users designed. This year we want to provide the users with CG value and CAI about their circuits,  helping adjusting and improving their circuits. We have to point out that, it is not enough to make a comprehensive assessment on circuits by only CG value and CAI, yet these two parameters are still appropriate references, for they are closely related to the expression level of the product.
Protocol 
   Previous projects of our team is not available for editing protocols. For the convenience of interaction, we add this function to CO-RAD, with which protocols can be easily edited and authorized users are able to view/comment protocols of others designs.