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+ | <script type="text/x-mathjax-config"> | ||
+ | MathJax.Hub.Config({ | ||
+ | tex2jax: {inlineMath: [['$','$'], ['\\(','\\)']]} | ||
+ | }); | ||
+ | </script> | ||
+ | <script src="https://2018.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"> </script> | ||
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<div class="header1"> | <div class="header1"> | ||
Collaboration | Collaboration | ||
</div> | </div> | ||
<div class="header2"> | <div class="header2"> | ||
− | + | XJTU-China | |
+ | |||
</div> | </div> | ||
<div class="content"> | <div class="content"> | ||
− | We | + | We built the model in CO-RAD for XJTU-China, based on their circuit design deviceA: |
− | + | </div> | |
− | and | + | <img src="https://static.igem.org/mediawiki/2018/d/d3/T--SYSU-Software--wet-9.png" /> |
− | < | + | |
− | For more | + | <div class="content"> |
+ | With our visual designer and the embedded mathematical ODE systems model, we constructed XJTU-China’s circuit | ||
+ | and dynamically analyzed the amounts of materials in it. We pay attention to the expression of EGFP, since its | ||
+ | amount can be evaluated in unit of optical density. Related formulas and parameters are shown below: | ||
+ | |||
+ | $$\frac{d[PsiR]}{dt} = \frac{k_{PsiR}[gene]_{PsiR}}{1+[Psicose]^n1}-d_{PsiR}[PsiR]$$ | ||
+ | $$\frac{d[EGFP]}{dt} = \frac{k_{EGFP}[gene]_{EGFP}}{1+[PsiR]^n2}-d_{PsiR}[EGFP]$$ | ||
+ | |||
+ | </div> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/5/5b/T--SYSU-Software--validation_table.png" /> | ||
+ | |||
+ | <div class="content"> | ||
+ | |||
+ | Experiment & model result: | ||
+ | |||
+ | </div> | ||
+ | |||
+ | <img src="https://static.igem.org/mediawiki/2018/7/7c/T--SYSU-Software--wet-12.png" /> | ||
+ | |||
+ | <div class="content"> | ||
+ | For more detail check <a href="javascript:void(0)" goto="Validation"> Validation </a> and | ||
+ | <a href="https://2018.igem.org/Team:XJTU-China/Model"> XJTU-China </a> | ||
</div> | </div> | ||
− | |||
<div class="caption">Figure 4: Collaboration with SYSU-China in the Biology Festival</div> | <div class="caption">Figure 4: Collaboration with SYSU-China in the Biology Festival</div> | ||
</div> | </div> |
Revision as of 18:46, 17 October 2018
<script type="text/x-mathjax-config"> MathJax.Hub.Config({ tex2jax: {inlineMath: [['$','$'], ['\\(','\\)']]} }); </script> <script src="https://2018.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"> </script>
Collaboration
XJTU-China
We built the model in CO-RAD for XJTU-China, based on their circuit design deviceA:
<img src="" />
With our visual designer and the embedded mathematical ODE systems model, we constructed XJTU-China’s circuit and dynamically analyzed the amounts of materials in it. We pay attention to the expression of EGFP, since its amount can be evaluated in unit of optical density. Related formulas and parameters are shown below:
$$\frac{d[PsiR]}{dt} = \frac{k_{PsiR}[gene]_{PsiR}}{1+[Psicose]^n1}-d_{PsiR}[PsiR]$$ $$\frac{d[EGFP]}{dt} = \frac{k_{EGFP}[gene]_{EGFP}}{1+[PsiR]^n2}-d_{PsiR}[EGFP]$$
<img src="" />
Experiment & model result:
<img src="" />
For more detail check <a href="javascript:void(0)" goto="Validation"> Validation </a> and <a href="https://2018.igem.org/Team:XJTU-China/Model"> XJTU-China </a>