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<link rel="stylesheet" href="https://2018.igem.org/Template:BioIQS-Barcelona/css/goodload?action=raw&ctype=text/css"> | <link rel="stylesheet" href="https://2018.igem.org/Template:BioIQS-Barcelona/css/goodload?action=raw&ctype=text/css"> | ||
− | <!--script src="/ | + | <!-- Habilitar nomes al app per veure les funcions Jquery --> |
+ | <script src="https://2018.igem.org/Template:BioIQS-Barcelona/js/vendor?action=raw&ctype=text/javascript"></script> | ||
<title>BIO IQS</title> | <title>BIO IQS</title> | ||
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<link href="https://2018.igem.org/Template:BioIQS-Barcelona/css/allmin?action=raw&ctype=text/css" rel="stylesheet"> <!-- canvio all.min per allmin--> | <link href="https://2018.igem.org/Template:BioIQS-Barcelona/css/allmin?action=raw&ctype=text/css" rel="stylesheet"> <!-- canvio all.min per allmin--> | ||
− | <link rel="stylesheet" href="https://2018.igem.org/Template:BioIQS-Barcelona/css/ | + | <link rel="stylesheet" href="https://2018.igem.org/Template:BioIQS-Barcelona/css/simplelineicons?action=raw&ctype=text/css"> <!-- CANVI--> |
<link href="https://fonts.googleapis.com/css?family=Lato" rel="stylesheet"> | <link href="https://fonts.googleapis.com/css?family=Lato" rel="stylesheet"> | ||
<link href="https://fonts.googleapis.com/css?family=Catamaran:100,200,300,400,500,600,700,800,900" rel="stylesheet"> | <link href="https://fonts.googleapis.com/css?family=Catamaran:100,200,300,400,500,600,700,800,900" rel="stylesheet"> | ||
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<link rel="stylesheet" href="https://2018.igem.org/Template:BioIQS-Barcelona/css/adaptwiki?action=raw&ctype=text/css"> | <link rel="stylesheet" href="https://2018.igem.org/Template:BioIQS-Barcelona/css/adaptwiki?action=raw&ctype=text/css"> | ||
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<div class="header-content mx-auto"> | <div class="header-content mx-auto"> | ||
− | <h1 class="mb-5">We are the BioIQS | + | <h1 class="mb-5">We are the BioIQS iGEM team!</h1> |
<a href="https://2018.igem.org/Team:BioIQS-Barcelona#download" class="btn btn-outline btn-xl js-scroll-trigger">Meet us!</a> | <a href="https://2018.igem.org/Team:BioIQS-Barcelona#download" class="btn btn-outline btn-xl js-scroll-trigger">Meet us!</a> | ||
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<div class="col-md-9 mx-auto"> | <div class="col-md-9 mx-auto"> | ||
− | <h2 class="section-heading orange"> | + | <h2 class="section-heading orange">Welcome to our page</h2> |
− | <h3 class="orange"> | + | <h3 class="orange">A brief resume:</h3> |
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<div class="col-md-auto"> | <div class="col-md-auto"> | ||
− | <p class="book orange">Our project is based on the design of a <b>personalized gluten sensor</b> | + | <p class="book orange">Our project is based on the design of a <b>personalized gluten sensor</b> by using the common tools of <b>synthetic biology</b>. There are already several sensors that are able to detect gluten in the food. However, there are milestones that still have not been overcome. We propose a robust model in which the <b>HLA-DQ</b> protein of a patient is expressed and used as a sensor to detect specific reactive gluten epitopes.</p> |
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<div class="row justify-content-center"> | <div class="row justify-content-center"> | ||
<div class="col-md-11 col-lg-7"> | <div class="col-md-11 col-lg-7"> | ||
− | <p class="text-b"><b>Coeliac disease (CD)</b> is an autoimmune disorder that is closely | + | <p class="text-b"><b>Coeliac disease (CD)</b> is an autoimmune disorder that is closely related with HLA (Human Leukocyte Antigen), a type of cell-surface proteins that are responsible for the regulation of the inmune systems in humans.</p> |
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− | + | <p class="apart fletxa">These molecules are responsible for the correct discrimination between what is self and foreign proteins, guaranteeing the correct immune response against foreign agents that can cause infections. | |
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− | Within the HLA protein family there | + | Within the HLA protein family there is a subset called HLA-DQ. There are several DQ isoforms that can bind to different gluten-derived epitopes and present them to T-cells. More specifically, 25% of the general population carry the HLA-DQ that can recognize gluten-derived epitopes, but only 1% of the population suffer from coeliac disease. |
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− | <p class="apart yellow"> | + | <p class="apart yellow">As a consequence of T-cell activation, an inmune response is triggered, and it ends up causing damage to the enterocytes present in the small intestine.</p> |
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<div class="col-sm-9"> | <div class="col-sm-9"> | ||
− | <p class="text-b">Understanding why the inflammatory response is triggered by a certain | + | <p class="text-b">Understanding why the inflammatory response is triggered by a certain type of T cells upon epitope presentation by HLA-DQ molecules is essential to uncover the mechanism of CD. Since the first step for the immune response activation is the recognition and binding of the gluten epitope to the HLA-DQ receptor, we developed a sensor based on this principle.</p> |
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<div class="col-md-8 end cnt block-desc-t"> | <div class="col-md-8 end cnt block-desc-t"> | ||
− | <p class="apart yellow">The development of a personalized sensor to determine reactive epitopes | + | <p class="apart yellow">The development of a personalized sensor to determine reactive epitopes could help to better understand the disease and would also allow the screening of those foods that could potentially trigger an immune response to the patient.</p> |
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<div class="col-md-auto orange"> | <div class="col-md-auto orange"> | ||
<p class="book">In our iGEM Project we will design a | <p class="book">In our iGEM Project we will design a | ||
− | <b>personalized gluten sensor</b> through a synthetic biology approach. To do so, we | + | <b>personalized gluten sensor</b> through a synthetic biology approach. To do so, we decided to build a model based on the HLA expression of the patient which will be coupled to a sensor, allowing the detection of reactive epitopes. The main specificities of our sensor are described as follows:</p> |
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<a class="js-scroll-trigger a-arrow" href="https://2018.igem.org/Team:BioIQS-Barcelona#t-objectives"><span class="arrow down"></span></a> | <a class="js-scroll-trigger a-arrow" href="https://2018.igem.org/Team:BioIQS-Barcelona#t-objectives"><span class="arrow down"></span></a> | ||
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<p class="apart big">first</p> | <p class="apart big">first</p> | ||
− | <p class="text-b"> | + | <p class="text-b">To obtain de HLA-DQ from scratch. That means, to extract the α and β chains <b>from the genomic DNA of a celiac patient.</b></p> |
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− | <p class="text-b"> | + | <p class="text-b">To express the human HLA-DQ in a <b>bacterial or yeast cell host.</b></p> |
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− | <!--<img class="image" src=" | + | <!--<img class="image" src="img/epitop.png" alt="Card image cap">--> |
− | <p class="text-b"> | + | <p class="text-b">To develop <b>non-dimensional mathematical and stochastic models</b> to understand and predict our sensor dynamics.</p> |
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<div class="col-md-6 left"> | <div class="col-md-6 left"> | ||
<p class="apart big">fourth</p> | <p class="apart big">fourth</p> | ||
− | <p class="text-b"> | + | <p class="text-b">To provide information to the public so as to <b>clear up misunderstandings related to the celiac disease.</b></p> |
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Revision as of 00:30, 18 October 2018
We are the BioIQS iGEM team!
Meet us!Welcome to our page
A brief resume:
Our project is based on the design of a personalized gluten sensor by using the common tools of synthetic biology. There are already several sensors that are able to detect gluten in the food. However, there are milestones that still have not been overcome. We propose a robust model in which the HLA-DQ protein of a patient is expressed and used as a sensor to detect specific reactive gluten epitopes.
Coeliac disease (CD) is an autoimmune disorder that is closely related with HLA (Human Leukocyte Antigen), a type of cell-surface proteins that are responsible for the regulation of the inmune systems in humans.
These molecules are responsible for the correct discrimination between what is self and foreign proteins, guaranteeing the correct immune response against foreign agents that can cause infections.
Within the HLA protein family there is a subset called HLA-DQ. There are several DQ isoforms that can bind to different gluten-derived epitopes and present them to T-cells. More specifically, 25% of the general population carry the HLA-DQ that can recognize gluten-derived epitopes, but only 1% of the population suffer from coeliac disease.
As a consequence of T-cell activation, an inmune response is triggered, and it ends up causing damage to the enterocytes present in the small intestine.
Understanding why the inflammatory response is triggered by a certain type of T cells upon epitope presentation by HLA-DQ molecules is essential to uncover the mechanism of CD. Since the first step for the immune response activation is the recognition and binding of the gluten epitope to the HLA-DQ receptor, we developed a sensor based on this principle.
The development of a personalized sensor to determine reactive epitopes could help to better understand the disease and would also allow the screening of those foods that could potentially trigger an immune response to the patient.
Objectives
Here there are:
In our iGEM Project we will design a personalized gluten sensor through a synthetic biology approach. To do so, we decided to build a model based on the HLA expression of the patient which will be coupled to a sensor, allowing the detection of reactive epitopes. The main specificities of our sensor are described as follows:
first
To obtain de HLA-DQ from scratch. That means, to extract the α and β chains from the genomic DNA of a celiac patient.
second
To express the human HLA-DQ in a bacterial or yeast cell host.
third
To develop non-dimensional mathematical and stochastic models to understand and predict our sensor dynamics.
fourth
To provide information to the public so as to clear up misunderstandings related to the celiac disease.