Difference between revisions of "Team:Edinburgh UG/Parts"

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<h1>Parts</h1>
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<h3>Note</h3>
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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    <title>Edinburgh iGEM 2018</title>
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    <link href="https://2018.igem.org/Team:Edinburgh_UG/bootstrapmincss?action=raw&ctype=text/css" rel="stylesheet">
  
  
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    <!-- Custom fonts for this template -->
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    <link href="https://2018.igem.org/Team:Edinburgh_UG/fontawesome?action=raw&ctype=text/css" rel="stylesheet" type="text/css">
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    <!-- Custom styles for this template -->
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    <link href="https://2018.igem.org/Team:Edinburgh_UG/home_css?action=raw&c" rel="stylesheet">
  
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<h3>Adding parts to the registry</h3>
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
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    <!-- Menu -->
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    <nav class="navbar navbar-expand-lg navbar-dark bg-dark">
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<a href="http://parts.igem.org/Add_a_Part_to_the_Registry">
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ADD PARTS
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          <ul class="navbar-nav">
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                <a class="nav-link" href="https://2018.igem.org/Team:Edinburgh_UG">Home <span class="sr-only">(current)</span></a>
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          Team
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Team">Team Members</a>
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Description">Description</a>
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Experiments">Experiments</a>
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Results">Results</a>
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Demonstrate">Demonstrate</a>
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Improve">Improve</a>
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Attributions">Attributions</a>
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          Parts
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Parts">Parts Overview</a>
  
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</div>
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<a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Basic_Part">Basic Parts</a>
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</div>
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<a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Composite_Part">Composite Parts</a>
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<a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Part_Collection">Part Collection</a>
  
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                </div>
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            <li class="nav-item active">
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                <a class="nav-link" href="https://2018.igem.org/Team:Edinburgh_UG/Safety">Safety <span class="sr-only">(current)</span></a>
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                <a class="nav-link" href="https://2018.igem.org/Team:Edinburgh_UG/Human_Practices">Human Practices <span class="sr-only">(current)</span></a>
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            </li>           
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            <li class="nav-item dropdown">
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                <a class="nav-link dropdown-toggle" href="#" id="navbarDropdownMenuLink" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false">
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          Awards
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                <div class="dropdown-menu" aria-labelledby="navbarDropdownMenuLink">
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                  <a class="dropdown-item" href="https://2018.igem.org/Team:Edinburgh_UG/Model">Model</a>
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            <li class="nav-item active">
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                <a class="nav-link" href="https://igem.org/2018_Judging_Form?team=Edinburgh_UG">Judging Form <span class="sr-only">(current)</span></a>
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            </li>
  
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<li class="nav-item active">
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                <a class="nav-link" href="https://2018.igem.org/Team:Edinburgh_UG/Medal_Criteria">Medal Criteria<span class="sr-only">(current)</span></a>
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            </li>
  
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<h3>Inspiration</h3>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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    <!-- Intro Header -->
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<ul>
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    <header class="masthead">
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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      <div class="intro-body">
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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        <div class="container">
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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              <h1 class="brand-heading" align="center">Parts Overview</h1>
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              <p class="intro-text"></p>
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            </div>
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          </div>
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<div class="container">         
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  <table class="table">
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    <thead>
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      <tr>
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        <th>Part number</th>
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        <th>Type</th>
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        <th>Description</th>
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        <th>Supporting information</th>
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        <th>Part length (bp)</th>
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      </tr>
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    </thead>
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    <tbody>
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      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725001"> BBa_K2725001</a></td>
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        <td>Composite</td>
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        <td>FabI + High expression cassette</td>
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        <td>FabI + Triclosan resistance gene from E. coli</td>
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        <td>1336</td>
 +
      </tr>
  
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<div class="clear extra_space"></div>
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      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725002"> BBa_K2725002</a></td>
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        <td>Basic</td>
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        <td>FabV</td>
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        <td>Triclosan resistance gene from Vibrio fischeri</td>
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<div class="column full_size">
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        <td>1203</td>
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      </tr>
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<h3>What information do I need to start putting my parts on the Registry?</h3>
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      <tr>
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<p>The information needed to initially create a part on the Registry is:</p>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725003"> BBa_K2725003</a></td>
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<ul>
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        <td>Composite</td>
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<li>Part Name</li>
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        <td>FabV + High expression cassette</td>
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<li>Part type</li>
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        <td>Triclosan resistance gene from Vibrio fischeri</td>
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<li>Creator</li>
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        <td>1721</td>
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<li>Sequence</li>
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      </tr>
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<li>Short Description (60 characters on what the DNA does)</li>
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      <tr>
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<li>Long Description (Longer description of what the DNA does)</li>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725004"> BBa_K2725004</a></td>
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<li>Design considerations</li>
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        <td>Composite</td>
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</ul>
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        <td>FabV + Low expression cassette</td>
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        <td>Triclosan resistance gene from Vibrio fischeri</td>
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<p>
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        <td>1721</td>
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We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
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      </tr>
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      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725005"> BBa_K2725005</a></td>
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        <td>Plasmid</td>
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        <td>FabV backbone</td>
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        <td>Standard iGEM backbone with Chloramphenicol resistance gene replaced with FabV</td>
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        <td>2613</td>
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      </tr>
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      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725006"> BBa_K2725006</a></td>
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        <td>Composite</td>
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        <td>micC-recA</td>
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        <td>micC construct for recA knock down</td>
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        <td>238</td>
 +
      </tr>
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      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725007"> BBa_K2725007</a></td>
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        <td>Composite</td>
 +
        <td>micC-uvrA</td>
 +
        <td>micC construct for uvrA knock down</td>
 +
        <td>238</td>
 +
      </tr>
 +
      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725008"> BBa_K2725008</a></td>
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        <td>Composite</td>
 +
        <td>micC-uvrA+uvrA</td>
 +
        <td>micC construct for uvrA and recA knock down</td>
 +
        <td>484</td>
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      </tr>
 +
      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725009"> BBa_K2725009</a></td>
 +
        <td>Composite</td>
 +
        <td>+/-mCherry</td>
 +
        <td>micC construct for the mCherry gene that produces increased mCherry fluorescence</td>
 +
        <td>2186</td>
 +
      </tr>
 +
      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725010"> BBa_K2725010</a></td>
 +
        <td>Composite</td>
 +
        <td>araC-mCherry</td>
 +
        <td>mCherry fluorescent protein under araC promoter</td>
 +
        <td>1940</td>
 +
      </tr>
 +
      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725011"> BBa_K2725011</a></td>
 +
        <td>Composite</td>
 +
        <td>ars-mCherry</td>
 +
        <td>mCherry fluorescent protein under ars promoter</td>
 +
        <td>1249</td>
 +
      </tr>
 +
      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725012"> BBa_K2725012</a></td>
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        <td>Basic</td>
 +
        <td>KanR 5*</td>
 +
        <td>P1003 kanamycin resistance with 5 amber stop codons</td>
 +
        <td>967</td>
 +
      </tr>
 +
      <tr>
 +
        <td> <a href="http://parts.igem.org/Part:BBa_K2725013"> BBa_K2725013</a></td>
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        <td>Basic</td>
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        <td>KanR 10*</td>
 +
        <td>P1003 kanamycin resistance with 10 amber stop codons</td>
 +
        <td>967</td>
 +
      </tr>
 +
      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725014"> BBa_K2725014</a></td>
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        <td>Basic</td>
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        <td>J23102 - SupD</td>
 +
        <td>Serine amber suppressor tRNA gene under J23102 Anderson promoter</td>
 +
        <td>224</td>
 +
      </tr>
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      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725015"> BBa_K2725015</a></td>
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        <td>Basic</td>
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        <td>J23103 - SupD</td>
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        <td>Serine amber suppressor tRNA gene under J23103 Anderson promoter</td>
 +
        <td>224</td>
 +
      </tr>
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      <tr>
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        <td> <a href="http://parts.igem.org/Part:BBa_K2725016"> BBa_K2725016</a></td>
 +
        <td>Basic</td>
 +
        <td>J23108 - SupD</td>
 +
        <td>Serine amber suppressor tRNA gene under J23108 Anderson promoter</td>
 +
        <td>224</td>
 +
      </tr>
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    </tbody>
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  </table>
 
</div>
 
</div>
  
 +
    <!-- Contact Section -->
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    <section id="contact" class="content-section text-center">
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        <div class="row">
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            <h2>Contact EdiGEM18</h2>
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            <p>Feel free to leave us a comment on social media!</p>
 +
            <ul class="list-inline banner-social-buttons">
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                <a href="https://twitter.com/EdiGEM2018" class="btn btn-default btn-lg">
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                  <i class="fa fa-twitter fa-fw"></i>
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                  <span class="network-name">Twitter</span>
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                </a>
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              <li class="list-inline-item">
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                <a href="https://www.instagram.com/igemedinburgh/" class="btn btn-default btn-lg">
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                  <i class="fa fa-instagram fa-fw"></i>
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                  <span class="network-name">Instagram</span>
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                </a>
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                <a href="https://www.facebook.com/EdiGEM2018/?ref=br_rs" class="btn btn-default btn-lg">
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                  <i class="fa fa-facebook fa-fw"></i>
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                  <span class="network-name">Facebook</span>
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                </a>
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 +
            </ul>
 +
          </div>
 +
        </div>
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    </section>
  
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<h3>Part Table </h3>
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<p>Please include a table of all the parts your team has made during your project on this page. Remember part characterization and measurement data must go on your team part pages on the Registry. </p>
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<groupparts>iGEM18 Edinburgh_UG</groupparts>
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Latest revision as of 01:32, 18 October 2018

Edinburgh iGEM 2018

Parts Overview

Part number Type Description Supporting information Part length (bp)
BBa_K2725001 Composite FabI + High expression cassette FabI + Triclosan resistance gene from E. coli 1336
BBa_K2725002 Basic FabV Triclosan resistance gene from Vibrio fischeri 1203
BBa_K2725003 Composite FabV + High expression cassette Triclosan resistance gene from Vibrio fischeri 1721
BBa_K2725004 Composite FabV + Low expression cassette Triclosan resistance gene from Vibrio fischeri 1721
BBa_K2725005 Plasmid FabV backbone Standard iGEM backbone with Chloramphenicol resistance gene replaced with FabV 2613
BBa_K2725006 Composite micC-recA micC construct for recA knock down 238
BBa_K2725007 Composite micC-uvrA micC construct for uvrA knock down 238
BBa_K2725008 Composite micC-uvrA+uvrA micC construct for uvrA and recA knock down 484
BBa_K2725009 Composite +/-mCherry micC construct for the mCherry gene that produces increased mCherry fluorescence 2186
BBa_K2725010 Composite araC-mCherry mCherry fluorescent protein under araC promoter 1940
BBa_K2725011 Composite ars-mCherry mCherry fluorescent protein under ars promoter 1249
BBa_K2725012 Basic KanR 5* P1003 kanamycin resistance with 5 amber stop codons 967
BBa_K2725013 Basic KanR 10* P1003 kanamycin resistance with 10 amber stop codons 967
BBa_K2725014 Basic J23102 - SupD Serine amber suppressor tRNA gene under J23102 Anderson promoter 224
BBa_K2725015 Basic J23103 - SupD Serine amber suppressor tRNA gene under J23103 Anderson promoter 224
BBa_K2725016 Basic J23108 - SupD Serine amber suppressor tRNA gene under J23108 Anderson promoter 224

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