Difference between revisions of "Team:IIT Delhi/Attributions"

 
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     <span class="border" >Dr. Zia Shaikh</span>
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     <span class="border" >Project Advisors</span>
 
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;">
  
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We collaborated with iGEM UNESP Brazil is working on the subject of <b>Engineered Probiotics Around the World.</b>
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<b> Dr. Zia Shaikh </b> <br>
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<br>The goal of the collaboration was to understand about the GMO legislation around the world and if there already is any regulations about engineered probiotics and if there are clinical trials or companies using engineered probiotics in these countries. This work was done in collaboration with teams Chalmers-Gothenburg, IIT Delhi, Jiangnan China, TecCEM and Lambert. We were grateful that they reached out to us. It was really interesting to learn about probiotics marketed in various countries, high tech startups working in the field of probiotics and recent clinical trials across the world that provide critical insight into a topic that has been of much importance recently. The data from the collaboration is given below,<br>
+
Dr. Zia Shaikh is an assistant professor at DBEB, IIT Delhi and is the Professor-in-charge at iGEM IIT Delhi. He has been associated with the team since the past 3 years and has played a vital role in ensuring smooth functioning of the team. He provided us with a well-furnished lab for our project and was instrumental in getting funds for our team. Also, he helped us in the various aspects of our project, despite it not being his core area of research.<br><br>
  
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<b>China</b><br>
 
−
In China, there is no regulation for genetically engineered probiotics, the present tests in the country approach pathogenic potential, and patronized standards for food evaluation. No companies or clinical trials that use engineered probiotics has come to our knowledge.<br>
 
  
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<b>India</b><br>
+
<b>Dr. Stefan </b><br>
−
In India, the ICMR (Indian Council of Medical Research) in partnership with DBT (Department of Biotechnology), created an official guide to evaluate probiotics in the country, so any probiotic product needs to be on this guide´s pattern to be released in the market.<br>
+
Dr. Stefan is a visiting faculty, from Germany, at DBEB, IIT Delhi. He has been a guiding light for iGEM IIT Delhi since 2015. Even though he is a specialist in Molecular Biology, he was instrumental in our project’s computational analysis as well as team organization and management. He spent countless nights helping us troubleshoot our project and enabled us to present our project in a more detailed manner.<br><br>
−
Before being approved and released, food is submitted to standardized tests for identification and characterization of its new chains, such as PCR, in vitro tests mimicking the gut environment, in vivo testing to check the effectiveness in live animals, safety assessment for human use, evaluation of efficacy in humans, also there are standards patterns that need to be followed for the process of food packing and management.<br>
+
−
Currently, the probiotic market in India is dominated by multinationals, which mainly commercialize fermented food products. No companies or clinical trials that use engineered probiotics has come to our knowledge.<br>
+
  
−
<b>Mexico</b><br>
+
<b>Mr. Kshitij Rai</b><br>
−
In Mexico, all food that has been processed or produced by genetically modified organisms are considered transgenic, but food containing GM or transgenic compounds are not identified, even though there are biosecurity laws and norms for regulation, such as SEP, CIBIOGEM, SAGARPA, SEMARNAT, SHCP and the Federal Law for Protection of the Consumer.<br>
+
Kshitij Rai, a graduate from IIT Delhi headed iGEM IIT Delhi for the past two years. Currently, he is pursuing PhD in Systems, Synthetic, and Physical Biology from Rice University, Texas.<br><br>
−
In terms of the norm, the Official Mexican, Norm NOM-056-FITO-1995, is in force and regulates everything related to GM mobilization in the country, so all public and private company must fulfill the requirements in the norm to have their food with genetically engineered compounds transit through Mexico. Furthermore, the law of Biosecurity of GMO and the Federal Law for Protection of the Consumer controls the release for consumption and commercialization of pilot projects besides regulating importation and exportation of GM in the country. No companies or clinical trials that use engineered probiotics has come to our knowledge.<br>
+
  
−
<b>Sweden</b><br>
+
<b>Mr. Abhilash Patel</b><br>
−
In Sweden every substance or combination of substances that is provided under the pretense that it has a preventative or therapeutic effect on diseases in humans or animals states for a pharmaceutical, which is regulated by the Swedish Medical Products Agency (MPA). When this kind of probiotic is been prepared to be released the Swedish Gene Technology Advisory Board and the Swedish National Council of Medical Ethics are often involved and give out statements and input in regards to the applications for clinical trials. There all pharmaceuticals that contain any modified organism need to be labeled with “This product contains (a) genetically modified organism(s)”, and all of the trials regarding GM pharmaceuticals are posted on the Swedish Medical Products Agency’s website. In Europe, the following company working with engineered probiotics has come to our knowledge: ActoBio Therapeutics (part of Intrexon) in Belgium.<br>
+
Abhilash Patel is pursuing PhD in Electrical Engineering from IIT Delhi. He is currently the team leader of iGEM IIT Delhi.  
 +
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<b>United States</b><br>
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<div class="bgimg-1">
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Engineered probiotics are not regulated by the US Food and Drug Administration, as they are neither a food nor a drug. As a result, they currently do not require large clinical trials like other drugs in America.
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  <div class="caption">
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The following companies working with engineered probiotics has come to our knowledge: Azitra, Synlogic and ZBiotics.<br>
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    <span class="border" >Professors</span>
 +
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</div>
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;">
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<b>Prof. Atul Narang (DBEB)</b><br>
 +
Dr. Atul Narang is the Head of Department of Department of Biochemical Engineering and Biotechnology (DBEB), IIT Delhi. He has supported us remarkably in terms of the lab space, resources and facilities.<br><br>
  
−
<b>Brazil</b><br>  
+
<b>Prof.Shaunak Sen (Department of Electrical Engineering)</b><br>
−
There exists no law that regulates genetically engineered probiotics, but in 2018 ANVISA, the Brazilian National Health Surveillance Agency, opened up the public consultation and now genetically engineered probiotics were added to the regulation. Besides, there is no companies or clinical trials that use engineered probiotics.
+
Prof. Shaunak Sen has assisted us profoundly with Microscopes, Plate-readers, and protocols. We would also like to thank him for his valuable advices on the idea Square Wave Generator, especially during the brainstorming sessions at the beginning.<br><br>
−
With this research, we were able to see that there is a growing movement of engineered probiotics mostly in the U.S., but that there still is a lack of laws and regulation all over the world to regulate these products before they can reach the market and the final consumers.<br>
+
 
 +
<b>Prof. James Gomes (Kusuma School of Biological Sciences)</b><br>
 +
We would like to greatly acknowledge Prof. James Gomes for his invaluable guidance towards the idea of the project. He has also assisted us with mathematical analysis, design and construction and possible topologies of the project.<br><br>
 +
 
 +
<b>Dr.Vivekanandan Perumal ( Kusuma School of Biological Sciences)</b><br>
 +
Dr. Vivekanandan is an assistant professor at KSBS, IIT Delhi. He helped us in developing our cloning strategy and provided us with various lab equipments at crucial times.<br><br>
 +
 
 +
<b>Dr.Ashish Misra (DBEB)</b><br>
 +
Dr. Ashish Misra is an assistant professor at DBEB, IIT Delhi and is a Professor mentor at iGEM IIT Delhi. He joined the team in 2016 and has helped us in troubleshooting our project and gaining more insight into it.<br><br>
 
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     <span class="border" >Shiv Nadar University</span>
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     <span class="border" >PhD. Researchers</span>
 
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;"><img src="https://static.igem.org/mediawiki/2018/9/9f/T--IIT_Delhi--shiv.png" alt="Smiley face" style="float:right;width:600px;margin:15px">
+
<b>Ms.Anamika Chauhan</b><br>
−
Genesis, The Life Sciences Department of Shiv Nadar University is interested in setting up an iGEM team for 2019. We are currently mentoring them after they reached out to us through our social media accounts. We had an illuminating mentoring session with them in this aspect where we discussed in detail the prerequisites for participating in iGEM competition as well as a discussion regarding Human Practices, Safety, Funding, iBEC and Track selection. It was a great experience for both the teams. We wish Team Shiv Nadar best of luck for their future endeavors and look forward to work alongside them in the coming year. </p>
+
Ms. Anamika is a PhD student at DBEB, IIT Delhi and has been a part of team iGEM IIT Delhi since 2015. She was crucial to our Wet Lab experiments and troubleshooting and helped us improve our lab procedures. Moreover, she has been very supportive at crucial moments faced during the project.<br><br>
−
 
+
 
−
 
+
<b>Mr. Arun Thapa</b><br>
 +
Mr. Arun is a PhD student at DBEB, IIT Delhi and has been a mentor for iGEM IIT Delhi since 2016. He played a significant role in Wet lab experiments and troubleshooting and gave us crucial advice at critical times.<br><br>
 +
</p>
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    <span class="border" >Assistance form Various Labs</span>
 
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 +
<b>UG Lab</b><br>
 +
Mr.Gulshan is the Lab Assistant of the Undergrad Lab, he has played a crucial role in terms of providing lab facilities and access throughout the entire tenure of the project.<br><br>
 +
 +
<b>DyCoBS</b><br>
 +
Mr. Venkat and Mr. Soumyadeep have assisted us in the Dynamic Control of Biological Systems Lab, and helped us refine our lab protocols and methods.<br><br>
 +
</p>
 
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<div class="bgimg-1">
 
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     <span class="border">iGEM LabPats</span>
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     <span class="border" >Human Practices</span>
 
   </div>
 
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</div>
 
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;">
 +
<b>Schools Across Delhi</b><br>
 +
We conducted synthetic Biology workshops various School across the city: Modern School, Bal Bharti School, Sanskriti School, SpringDales, Bloom Public School,Carmel Convent School. We express our gratitude towards all of these schools for their support in this endeavour.<br><br>
 +
 +
<b>Professors at IIT Delhi</b><br>
 +
We would also like to thank Prof. P. V. Madhusudhan Rao (Mechanical Engineering Department) for their support to conduct human practices at Institute level.<br>.<br>
 +
</p>
 +
</div>
  
−
      <p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;"><img src="https://static.igem.org/mediawiki/2018/a/a0/T--IIT_Delhi--LabPats.png" alt="Smiley face" style="float:right;height:400px;margin:15px">During the summers, we had a skype session with iGEM Labpats - a student team from Carroll High School, U.S.A. We talked about our project and exchanged design ideas. We discussed the possible ways in which human practices could be conducted in an impactful manner. The discussion was really stimulating and gave us some great ideas for our human practices. iGEM IIT Delhi being a collegiate team was amazed to see the dedication of these school students. We wish them our best in their future endeavors. <br><br><br><br><br><br></p>
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    <span class="border" >Sponsors</span>
 
   </div>
 
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</div>
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<div style="color: black;background-color:white;text-align:center;padding:50px 80px;text-align: justify;width: 75%;margin: auto;">
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;"><img src="https://static.igem.org/mediawiki/2018/3/35/T--IIT_Delhi--sponsors.png" alt="Smiley face" style="float:right;width:600px;margin:15px">
 +
 +
<b>Mr. Brij Mohan Gupta:</b><br>
 +
We thank Mr. Brij Mohan Gupta aka Bade Bhaiyya for his hearty financial Contributions and moral support for our whole team.<br><br>
 +
 +
<b>Snapgene:</b><br>
 +
We thank our Snapgene for providing us licenses to its software which made the work of designing and analyzing the gene sequences very remarkably convenient.<br><br>
 +
 +
<b>MathWorks:</b><br>
 +
We express our gratitude to Mathworks for providing us with Licenses to MATLAB and Simulink which provided us with a great tool for computational modeling.<br><br>
 +
 +
<b>Ketto Donors:</b><br>
 +
We would also like to express our gratitude towards all the people who funded our project through our Ketto Campaign Page.<br><br>
 +
 +
<b>Previous Sponsors:</b><br>
 +
We thank our sponsors for their support in the previous years of iGem IIT Delhi: Mahindra, Woodland, Coding Blocks, Medanta, DHL, Prompt<br><br>
 +
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     <span class="border">InterLab Troubleshooting</span>
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     <span class="border" >Team Members</span>
 
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</div>
 
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<div style="position:relative;">
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<div style="color: black;background-color:white;text-align:center;padding:50px 80px;text-align: justify;width: 75%;margin: auto;">
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;">
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<b>Wetlab:</b><br>
 +
Saksham Sharma, Abhilash Patel, Vasu Jain, Priyanka Singh, Shubham Jain, Neha Arora, Soumya Gupta<br><br>
  
−
      <p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;"> We faced some problems during our InterLab characterization, our absorbance at 600nm for silica beads at high dilutions didn't follow the trend. Upon which, we discussed the problem on All India iGEM group, where the teams gave us multiple suggestions and shared their protocols by which we were able to obtain our results as deisred by iGEM. Hence, we would like to express our gratitude towards the Indian iGEM teams.
+
<b>Computational Modeling:</b><br>
−
+
Abhilash Patel, Shubham Jain, Vedant Raval,Vasu Jain<br><br>
−
</p>
+
  
 +
<b>Human Practices:</b><br>
 +
Saksham Sharma, Vasu Jain, Shubham Jain, Priyanka Singh, Neha Arora, Soumya Gupta, Ankush Barman, Aman Sahu, Vedant Raval<br><br>
 +
 +
<b>Wiki Development:</b><br>
 +
Aman Kumar Sahu, Vedant Raval, Divya Choudhary, Saksham Sharma, Priyanka Singh, Vasu Jain, Shubham Jain<br><br>
 +
 +
<b>Creative, Design and Content Development:</b><br>
 +
Saksham Sharma, Priyanka Singh, Vasu Jain, Shubham Jain, Neha Arora, Soumya Gupta<br><br>
 +
 +
<b>Marketing:</b><br>
 +
Saksham Sharma, Vedant Raval, Aman Sahu, Soumya Gupta, Vasu Jain<br>
 +
</p>
 +
</div>
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<div class="bgimg-1">
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  <div class="caption">
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    <span class="border" >Research Institute</span>
 
   </div>
 
   </div>
 
</div>
 
</div>
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<div style="color: black;background-color:white;text-align:center;padding:50px 80px;text-align: justify;width: 75%;margin: auto;">
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<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;">
 +
We thank our institute, IIT Delhi wholeheartedly.<br>
 +
</p>
 +
</div>
 +
 +
<div class="bgimg-1">
 +
  <div class="caption">
 +
    <span class="border" >iGEM Foundation</span>
 +
  </div>
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</div>
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<div style="color: black;background-color:white;text-align:center;padding:50px 80px;text-align: justify;width: 75%;margin: auto;">
 +
 +
 +
<p style="font-size:20px;font-family: 'Lato', sans-serif;font-weight:400;">
 +
Last but not the least, we are extremely grateful to International Genetic Engineering Machine Foundation for creating such an incredible platform 'iGEM Competition' where multidisciplinary students get the opportunity to work and build genetically engineered systems using standard biological parts(BioBricks) to solve real-world challenges. Moreover, it brings all such students and their projects together annually.<br>
 +
 +
</p>
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</div>
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Latest revision as of 02:52, 18 October 2018

iGEM IIT Delhi

Notebook
Lab Records Medal Criteria
Team
Members Attributions
Collaboration
Human Practices
Human Practices Safety Public Engagement
Modelling
Parts
Basic Parts Composite Parts
Results
Demonstrate Interlab
Project
Overview Design
Project Advisors

Dr. Zia Shaikh
Dr. Zia Shaikh is an assistant professor at DBEB, IIT Delhi and is the Professor-in-charge at iGEM IIT Delhi. He has been associated with the team since the past 3 years and has played a vital role in ensuring smooth functioning of the team. He provided us with a well-furnished lab for our project and was instrumental in getting funds for our team. Also, he helped us in the various aspects of our project, despite it not being his core area of research.

Dr. Stefan
Dr. Stefan is a visiting faculty, from Germany, at DBEB, IIT Delhi. He has been a guiding light for iGEM IIT Delhi since 2015. Even though he is a specialist in Molecular Biology, he was instrumental in our project’s computational analysis as well as team organization and management. He spent countless nights helping us troubleshoot our project and enabled us to present our project in a more detailed manner.

Mr. Kshitij Rai
Kshitij Rai, a graduate from IIT Delhi headed iGEM IIT Delhi for the past two years. Currently, he is pursuing PhD in Systems, Synthetic, and Physical Biology from Rice University, Texas.

Mr. Abhilash Patel
Abhilash Patel is pursuing PhD in Electrical Engineering from IIT Delhi. He is currently the team leader of iGEM IIT Delhi.

Professors

Prof. Atul Narang (DBEB)
Dr. Atul Narang is the Head of Department of Department of Biochemical Engineering and Biotechnology (DBEB), IIT Delhi. He has supported us remarkably in terms of the lab space, resources and facilities.

Prof.Shaunak Sen (Department of Electrical Engineering)
Prof. Shaunak Sen has assisted us profoundly with Microscopes, Plate-readers, and protocols. We would also like to thank him for his valuable advices on the idea Square Wave Generator, especially during the brainstorming sessions at the beginning.

Prof. James Gomes (Kusuma School of Biological Sciences)
We would like to greatly acknowledge Prof. James Gomes for his invaluable guidance towards the idea of the project. He has also assisted us with mathematical analysis, design and construction and possible topologies of the project.

Dr.Vivekanandan Perumal ( Kusuma School of Biological Sciences)
Dr. Vivekanandan is an assistant professor at KSBS, IIT Delhi. He helped us in developing our cloning strategy and provided us with various lab equipments at crucial times.

Dr.Ashish Misra (DBEB)
Dr. Ashish Misra is an assistant professor at DBEB, IIT Delhi and is a Professor mentor at iGEM IIT Delhi. He joined the team in 2016 and has helped us in troubleshooting our project and gaining more insight into it.

PhD. Researchers

Ms.Anamika Chauhan
Ms. Anamika is a PhD student at DBEB, IIT Delhi and has been a part of team iGEM IIT Delhi since 2015. She was crucial to our Wet Lab experiments and troubleshooting and helped us improve our lab procedures. Moreover, she has been very supportive at crucial moments faced during the project.

Mr. Arun Thapa
Mr. Arun is a PhD student at DBEB, IIT Delhi and has been a mentor for iGEM IIT Delhi since 2016. He played a significant role in Wet lab experiments and troubleshooting and gave us crucial advice at critical times.

Assistance form Various Labs

UG Lab
Mr.Gulshan is the Lab Assistant of the Undergrad Lab, he has played a crucial role in terms of providing lab facilities and access throughout the entire tenure of the project.

DyCoBS
Mr. Venkat and Mr. Soumyadeep have assisted us in the Dynamic Control of Biological Systems Lab, and helped us refine our lab protocols and methods.

Human Practices

Schools Across Delhi
We conducted synthetic Biology workshops various School across the city: Modern School, Bal Bharti School, Sanskriti School, SpringDales, Bloom Public School,Carmel Convent School. We express our gratitude towards all of these schools for their support in this endeavour.

Professors at IIT Delhi
We would also like to thank Prof. P. V. Madhusudhan Rao (Mechanical Engineering Department) for their support to conduct human practices at Institute level.
.

Sponsors

Smiley face Mr. Brij Mohan Gupta:
We thank Mr. Brij Mohan Gupta aka Bade Bhaiyya for his hearty financial Contributions and moral support for our whole team.

Snapgene:
We thank our Snapgene for providing us licenses to its software which made the work of designing and analyzing the gene sequences very remarkably convenient.

MathWorks:
We express our gratitude to Mathworks for providing us with Licenses to MATLAB and Simulink which provided us with a great tool for computational modeling.

Ketto Donors:
We would also like to express our gratitude towards all the people who funded our project through our Ketto Campaign Page.

Previous Sponsors:
We thank our sponsors for their support in the previous years of iGem IIT Delhi: Mahindra, Woodland, Coding Blocks, Medanta, DHL, Prompt

Team Members

Wetlab:
Saksham Sharma, Abhilash Patel, Vasu Jain, Priyanka Singh, Shubham Jain, Neha Arora, Soumya Gupta

Computational Modeling:
Abhilash Patel, Shubham Jain, Vedant Raval,Vasu Jain

Human Practices:
Saksham Sharma, Vasu Jain, Shubham Jain, Priyanka Singh, Neha Arora, Soumya Gupta, Ankush Barman, Aman Sahu, Vedant Raval

Wiki Development:
Aman Kumar Sahu, Vedant Raval, Divya Choudhary, Saksham Sharma, Priyanka Singh, Vasu Jain, Shubham Jain

Creative, Design and Content Development:
Saksham Sharma, Priyanka Singh, Vasu Jain, Shubham Jain, Neha Arora, Soumya Gupta

Marketing:
Saksham Sharma, Vedant Raval, Aman Sahu, Soumya Gupta, Vasu Jain

Research Institute

We thank our institute, IIT Delhi wholeheartedly.

iGEM Foundation

Last but not the least, we are extremely grateful to International Genetic Engineering Machine Foundation for creating such an incredible platform 'iGEM Competition' where multidisciplinary students get the opportunity to work and build genetically engineered systems using standard biological parts(BioBricks) to solve real-world challenges. Moreover, it brings all such students and their projects together annually.

Contact us

Address

Undergraduate Laboratory
Department of Biotechnology and Biochemical Engineering, IIT Delhi