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                <a class="item leftnav-item" href="#header1">Natural language processing (NLP) </a>
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             <h1>Model</h1>
            <h1>Model</h1>
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            <p>There're two outstanding models supporting our project:</p>
            <p>There're two outstanding models supporting our project:</p>
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            <ul>
            <ul>
+
                <li><strong>Natural language processing (NLP)</strong></li>
              <li><strong>Natural language processing (NLP)</strong> </li>
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                <li><strong>Object-relational mapping (ORM)</strong></li>
              <li><strong>Object-relational mapping (ORM)</strong></li>
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                <li><strong>WebSocket</strong></li>
              <li><strong>WebSocket</strong></li>
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            </ul>
            </ul>
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            <h2><strong>Natural language processing (NLP)</strong></h2>
            <h2 id="header1"><strong>Natural language processing (NLP)</strong> </h2>
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            <p>Natural language processing (NLP) is an area of computer science and artificial intelligence that is
            <p>Natural language processing (NLP) is an area of computer science and artificial intelligence that is concerned with the interaction between computers and humans in natural language.</p>
+
                concerned with the interaction between computers and humans in natural language.</p>
            <p>The ultimate goal of NLP is to enable computers to understand language as well as we do.</p>
+
            <p>The ultimate goal of NLP is to enable computers to understand language as well as we do.</p>
            <p>For example, we can use these keywords to search:</p>
+
            <p>For example, we can use these keywords to search:</p>
            <p><code>molecular biology</code></p>
+
            <p><code>molecular biology</code></p>
            <p>But NLP give us the power to get closer to what we actually want to search:</p>
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            <p>But NLP give us the power to get closer to what we actually want to search:</p>
            <p><code>molecular biology by Someone this year with #immunity</code></p>
+
            <p><code>molecular biology by Someone this year with #immunity</code></p>
            <p>NLP can extract all the information and construct a query action:</p>
+
            <p>NLP can extract all the information and construct a query action:</p>
            <p><code>keyword: molecular biology
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            <p><code>keyword: molecular biology
        author: Someone
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                author: Someone
        time: this year
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                time: this year
        label: #immunity</code></p>
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                label: #immunity</code></p>
            <p>In our project, we use an open-source software named <strong>Stanford CoreNLP</strong> (https://stanfordnlp.github.io/CoreNLP/) to parse the search string.</p>
+
            <p>In our project, we use an open-source software named <strong>Stanford CoreNLP</strong>
            <p><img alt="image-20181017181227081" src="https://static.igem.org/mediawiki/2018/9/91/T--USTC-Software--image-20181017181227081.png" /></p>
+
                (https://stanfordnlp.github.io/CoreNLP/) to parse the search string.</p>
            <p>CoreNLP provides many underlying models so that we can get analysis information to construct more expressive and more human-friendly query.</p>
+
     
            <div class="divider"></div>
+
            <p>CoreNLP provides many underlying models so that we can get analysis information to construct more
            <h2 id="header2"><strong>Object-relational mapping (ORM)</strong></h2>
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                expressive and more human-friendly query.</p>
            <p>Object-Relational Mapping (ORM) allows us to work with objects and have them saved to the database automatically. It can greatly simplify create-read-update-delete (CRUD) operations and make our code more comprehensive.</p>
+
            <div class="divider"></div>
            <p>ORM makes our <code>user</code>,<code>report</code>,<code>notice</code> and more models easy to query, to list and to link to each other.</p>
+
            <h2><strong>Object-relational mapping (ORM)</strong></h2>
            <p><img alt="ORM.svg" src="https://static.igem.org/mediawiki/2018/5/5d/T--USTC-Software--ORM.svg" /></p>
+
            <p>Object-Relational Mapping (ORM) allows us to work with objects and have them saved to the database
            <p>In our project, we use <strong>Django ORM</strong> with MySQL backend as the underlying models to provide fast and flexible queries.</p>
+
                automatically. It can greatly simplify create-read-update-delete (CRUD) operations and make our code
            <div class="divider"></div>
+
                more comprehensive.</p>
            <h2 id="header3"><strong>WebSocket</strong></h2>
+
            <p>ORM makes our <code>user</code>,<code>report</code>,<code>notice</code> and more models easy to query, to
            <p>WebSocket is a computer communications protocol, providing full-duplex communication channels over a single TCP connection. The HTML5 WebSockets specification defines an API that enables web pages to use the WebSockets protocol for two-way communication with a remote host. It introduces the WebSocket interface and defines a full-duplex communication channel that operates through a single socket over the Web. HTML5 WebSockets provide an enormous reduction in unnecessary network traffic and latency compared to the unscalable polling and long-polling solutions that were used to simulate a full-duplex connection by maintaining two connections.</p>
+
                list and to link to each other.</p>
            <p><img alt="websocket.jpg" src="https://static.igem.org/mediawiki/2018/f/f0/T--USTC-Software--websocket.jpg" /></p>
+
            <p><img alt="ORM.svg" src="https://static.igem.org/mediawiki/2018/9/91/T--USTC-Software--image-20181017181227081.png"/></p>
            <p>In out project, we use WebSocket protocol to push our notifications. The WebSocket protocol makes the new notifications even real-time fast to be received.</p>
+
            <p>In our project, we use <strong>Django ORM</strong> with MySQL backend as the underlying models to provide
        </div>
+
                fast and flexible queries.</p>
        </d iv>
+
            <div class="divider"></div>
 +
            <h2><strong>WebSocket</strong></h2>
 +
            <p>WebSocket is a computer communications protocol, providing full-duplex communication channels over a
 +
                single TCP connection. The HTML5 WebSockets specification defines an API that enables web pages to use
 +
                the WebSockets protocol for two-way communication with a remote host. It introduces the WebSocket
 +
                interface and defines a full-duplex communication channel that operates through a single socket over the
 +
                Web. HTML5 WebSockets provide an enormous reduction in unnecessary network traffic and latency compared
 +
                to the unscalable polling and long-polling solutions that were used to simulate a full-duplex connection
 +
                by maintaining two connections.</p>
 +
            <p><img alt="websocket.jpg" src="https://static.igem.org/mediawiki/2018/f/f0/T--USTC-Software--websocket.jpg"/></p>
 +
            <p>In out project, we use WebSocket protocol to push our notifications. The WebSocket protocol makes the new
 +
                notifications even real-time fast to be received.</p></div>
 
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Latest revision as of 04:00, 18 October 2018

Model

There're two outstanding models supporting our project:

  • Natural language processing (NLP)
  • Object-relational mapping (ORM)
  • WebSocket

Natural language processing (NLP)

Natural language processing (NLP) is an area of computer science and artificial intelligence that is concerned with the interaction between computers and humans in natural language.

The ultimate goal of NLP is to enable computers to understand language as well as we do.

For example, we can use these keywords to search:

molecular biology

But NLP give us the power to get closer to what we actually want to search:

molecular biology by Someone this year with #immunity

NLP can extract all the information and construct a query action:

keyword: molecular biology author: Someone time: this year label: #immunity

In our project, we use an open-source software named Stanford CoreNLP (https://stanfordnlp.github.io/CoreNLP/) to parse the search string.

CoreNLP provides many underlying models so that we can get analysis information to construct more expressive and more human-friendly query.

Object-relational mapping (ORM)

Object-Relational Mapping (ORM) allows us to work with objects and have them saved to the database automatically. It can greatly simplify create-read-update-delete (CRUD) operations and make our code more comprehensive.

ORM makes our user,report,notice and more models easy to query, to list and to link to each other.

ORM.svg

In our project, we use Django ORM with MySQL backend as the underlying models to provide fast and flexible queries.

WebSocket

WebSocket is a computer communications protocol, providing full-duplex communication channels over a single TCP connection. The HTML5 WebSockets specification defines an API that enables web pages to use the WebSockets protocol for two-way communication with a remote host. It introduces the WebSocket interface and defines a full-duplex communication channel that operates through a single socket over the Web. HTML5 WebSockets provide an enormous reduction in unnecessary network traffic and latency compared to the unscalable polling and long-polling solutions that were used to simulate a full-duplex connection by maintaining two connections.

websocket.jpg

In out project, we use WebSocket protocol to push our notifications. The WebSocket protocol makes the new notifications even real-time fast to be received.