Difference between revisions of "Team:SSTi-SZGD/Parts"

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<h1>Parts</h1>
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<h3>Note</h3>
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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<h3>Adding parts to the registry</h3>
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
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<div class="button_link">
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<a href="http://parts.igem.org/Add_a_Part_to_the_Registry">
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ADD PARTS
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<h3>Inspiration</h3>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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<ul>
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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<h3>What information do I need to start putting my parts on the Registry?</h3>
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<p>The information needed to initially create a part on the Registry is:</p>
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<ul>
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<li>Part Name</li>
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<li>Part type</li>
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<li>Creator</li>
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<li>Sequence</li>
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<li>Short Description (60 characters on what the DNA does)</li>
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<li>Long Description (Longer description of what the DNA does)</li>
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<li>Design considerations</li>
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</ul>
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<p>
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We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
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<h3>Part Table </h3>
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<p>Please include a table of all the parts your team has made during your project on this page. Remember part characterization and measurement data must go on your team part pages on the Registry. </p>
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<html lang="en">
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<head>
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<link rel="stylesheet" type="text/css" href="https://2018.igem.org/Team:SSTi-SZGD/css/Parts?action=raw&ctype=text/css"/>
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<script src="https://2018.igem.org/Team:SSTi-SZGD/js/Parts?action=raw&ctype=text/javascript" type="text/javascript" charset="utf-8"></script>
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<body>
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<div class="page_content">
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<!--Banner-->
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<div class="Banner"></div>
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<!--Content-->
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<div class="container Content">
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<!--Overview-->
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<section class="Overview col-xs-12 col-md-10">
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<div class="title">Overview<!--{cn}概述--></div>
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<div class="content abstract">
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This year, we submitted seven new parts in total, including four basic parts and three composite parts. We took advantage on the BGI China special gene synthesis promotion offer in August this year to synthesize our basic parts, such as coding sequence, RBS, promoter and signal peptide separately. The composite parts were generated using a combination of PCR, restriction ligation and 3A assembly methods. All submitted parts are RFC10 compatible.
 +
<!--{cn}今年，我们共提交了7个新的部分，包括4个基本部分和3个综合部分。我们利用BGI中国公司今年8月推出的特殊基因合成产品来合成我们的基础部件，分别合成了编码序列、RBS、启动子和信号肽等基本部分。采用聚合酶链反应(PCR)、限制性内切酶连接和3a装配相结合的方法制备复合构件。所有提交的部件都与RFC 10兼容。-->
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</div>
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</section>
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<!--All parts-->
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<section id="All_parts" class="All_parts col-xs-12 col-md-10">
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<div class="subtitle">
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<span>All parts<!--{cn}所有部分--></span>
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</div>
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<div class="content table-responsive">
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<table class="table table-bordered">
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<thead>
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<tr>
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<th>Name<!--{cn}名称--></th>
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<th>Type<!--{cn}类型--></th>
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<th>Description<!--{cn}描述--></th>
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<th>Designer<!--{cn}设计者--></th>
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<th>Length<!--{cn}长度(bp)--></th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593001">BBa_K2593001</a></td>
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<td>coding<!--{cn}编码--></td>
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<td>Hyaluronic acid synthase protein<!--{cn}透明质酸合成酶蛋白--></td>
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<td>Hong Chen<!--{cn}陈红--></td>
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<td>1254</td>
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</tr>
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<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593003">BBa_K2593003</a></td>
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<td>coding<!--{cn}编码--></td>
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<td>Signal peptide<!--{cn}信号肽--></td>
 +
<td>Hong Chen<!--{cn}陈红--></td>
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<td>99</td>
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</tr>
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<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593004">BBa_K2593004</a></td>
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<td>coding<!--{cn}编码--></td>
 +
<td>Leech Hyaluronic acid hydrolase protein (58KDa)<!--{cn}水蛭透明质酸水解酶蛋白（58 Kda）--></td>
 +
<td>Huimin Li<!--{cn}李慧敏--></td>
 +
<td>1470</td>
 +
</tr>
 +
<tr>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2593009">BBa_K2593009</a></td>
 +
<td>coding<!--{cn}编码--></td>
 +
<td>Leech Hyaluronic acid hydrolase protein with an exported signal peptide and 6His-tag at N-terminus<!--{cn}含信号肽和6 His的水蛭Haase编码基因(n-端)--></td>
 +
<td>Huimin Li<!--{cn}李慧敏--></td>
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<td>1686</td>
 +
</tr>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593006">BBa_K2593006</a></td>
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<td>composite<!--{cn}综合--></td>
 +
<td>Leech Hyaluronic acid hydrolase with inducible promoter PlepA, RBS, an exporting signal peptide, 6Histag and a terminator<!--{cn}水蛭透明质酸水解酶具有诱导启动子，RBS，一个输出信号肽，6His和终止子--></td>
 +
<td>Yongtao Lin<!--{cn}林永涛--></td>
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<td>1962</td>
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</tr>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593007">BBa_K2593007</a></td>
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<td>composite<!--{cn}综合--></td>
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<td>Hyaluronic acid synthase protein with inducible promoter, RBS, and a terminator.<!--{cn}具有诱导启动子、RBS和终止子的透明质酸合成酶蛋白--></td>
 +
<td>Yongtao Lin<!--{cn}林永涛--></td>
 +
<td>2672</td>
 +
</tr>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593008">BBa_K2593008</a></td>
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<td>composite<!--{cn}综合--></td>
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<td>UDP-glucose dehydrogenase and UDP-gulcose pyrophosphoryase with a constitutive promotor, RBS and a terminator.<!--{cn}UDP-葡萄糖脱氢酶和UDP-果糖焦磷酸化酶具有组成性启动子RBS和终止子--></td>
 +
<td>Hong Chen<!--{cn}陈红--></td>
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<td>2796</td>
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</tr>
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</tbody>
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</table>
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</div>
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</section>
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<!--Basic part-->
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<section id="Basic_part" class="Basic_part col-xs-12 col-md-10">
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<div class="subtitle">
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<span>Basic parts<!--{cn}基本配件--></span>
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</div>
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<div class="content table-responsive">
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<table class="table">
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<thead>
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<tr>
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<th>Name<!--{cn}名称--></th>
 +
<th>Type<!--{cn}类型--></th>
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<th>Description<!--{cn}描述--></th>
 +
<th>Designer<!--{cn}设计者--></th>
 +
<th>Length<!--{cn}长度(bp)--></th>
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</tr>
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</thead>
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<tbody>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593001">BBa_K2593001</a></td>
 +
<td>coding<!--{cn}编码--></td>
 +
<td>Hyaluronic acid synthase protein<!--{cn}透明质酸合成酶蛋白--></td>
 +
<td>Hong Chen<!--{cn}陈红--></td>
 +
<td>1254</td>
 +
</tr>
 +
<tr>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2593003">BBa_K2593003</a></td>
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<td>coding<!--{cn}编码--></td>
 +
<td>Signal peptide<!--{cn}信号肽--></td>
 +
<td>Hong Chen<!--{cn}陈红--></td>
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<td>99</td>
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</tr>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593004">BBa_K2593004</a></td>
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<td>coding<!--{cn}编码--></td>
 +
<td>Leech Hyaluronic acid hydrolase protein (58KDa)<!--{cn}水蛭透明质酸水解酶蛋白（58 Kda）--></td>
 +
<td>Huimin Li<!--{cn}李慧敏--></td>
 +
<td>1470</td>
 +
</tr>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593009">BBa_K2593009</a></td>
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<td>coding<!--{cn}编码--></td>
 +
<td>Leech Hyaluronic acid hydrolase protein with an exported signal peptide and 6His-tag at N-terminus<!--{cn}含信号肽和6 His的水蛭Haase编码基因(n-端)--></td>
 +
<td>Huimin Li<!--{cn}李慧敏--></td>
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<td>1686</td>
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</tr>
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</tbody>
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</table>
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</div>
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</section>
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<!--Composite part-->
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<section id="Composite_part" class="Composite_part col-xs-12 col-md-10">
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<div class="subtitle">
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<span>Composite parts<!--{cn}复合零件--></span>
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</div>
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<div class="content table-responsive">
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<table class="table">
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<thead>
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<tr>
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<th>Name<!--{cn}名称--></th>
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<th>Type<!--{cn}类型--></th>
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<th>Description<!--{cn}描述--></th>
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<th>Designer<!--{cn}设计者--></th>
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<th>Length<!--{cn}长度(bp)--></th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593006">BBa_K2593006</a></td>
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<td>composite<!--{cn}综合--></td>
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<td>Leech Hyaluronic acid hydrolase with an inducible promoter PlepA, RBS, an exporting signal peptide, 6Histag and a terminator.<!--{cn}水蛭透明质酸水解酶具有诱导启动子，RBS，一个输出信号肽，6His和终止子--></td>
 +
<td>Yongtao Lin<!--{cn}林永涛--></td>
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<td>1962</td>
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</tr>
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<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593007">BBa_K2593007</a></td>
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<td>composite<!--{cn}综合--></td>
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<td>Hyaluronic acid synthase protein with inducible promoter, RBS, and a terminator.<!--{cn}具有诱导启动子、RBS和终止子的透明质酸合成酶蛋白--></td>
 +
<td>Yongtao Lin<!--{cn}林永涛--></td>
 +
<td>2672</td>
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</tr>
 +
<tr>
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<td><a href="http://parts.igem.org/Part:BBa_K2593008">BBa_K2593008</a></td>
 +
<td>composite<!--{cn}综合--></td>
 +
<td>UDP-glucose dehydrogenase and UDP-gulcose pyrophosphoryase with a constitutive promotor, RBS and a terminator.<!--{cn}UDP-葡萄糖脱氢酶和UDP-果糖焦磷酸化酶具有组成性启动子RBS和终止子--></td>
 +
<td>Hong Chen<!--{cn}陈红--></td>
 +
<td>2796</td>
 +
</tr>
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</tbody>
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</table>
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 +
</div>
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</section>
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<!--Improved part-->
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<section id="Improved_part" class="Improved_part col-xs-12 col-md-10">
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<div class="subtitle">
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<span>Improved parts<!--{cn}改进部分--></span>
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</div>
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<div class="content abstract">
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In our project, we added to the characterization of 
 +
<!--{cn}在我们的项目中，我们添加了现有的-->
 +
<a href="http://parts.igem.org/Part:BBa_K1469009">an existing Biobrick<!--{cn}生物砖块--></a>
 +
, design by Philip Hartz from iGEM Saarland 2014. Our P43-tuaD-gtaB-T1 composite part was designed based on two BioBrick parts (
 +
<!--{cn}，设计由菲利普·哈茨从萨尔iGEM大赛2014年的表征。我们的P43-tuaD-gtaB-T1复合部件是基于两个BioBrick组件设计（-->
 +
<a href="http://parts.igem.org/Part:BBa_K1469002">BBa_K1469002</a>
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and<!--{cn}和-->
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<a href="http://parts.igem.org/Part:BBa_K1469005">BBa_K1469005</a>
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) created by Saarland. For example, co-expression of tuaD-gtaB as an operon under the control a constitutive promoter so that recombinant <!--{cn}）例如，将tuad-gtab作为操纵子的共同表达作为控制下的一个本构启动子以至于重组。例如，将tuad-gtab作为操纵子的共同表达作为控制下的一个本构启动子以至于重组-->
 +
<i>B. Subtilis 168<!--{cn}枯草芽孢杆菌168--></i>
 +
produces elevated level of HA.<!--{cn}产生较高水平的透明质酸。-->
 +
</div>
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</section>
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</div>
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Latest revision as of 14:52, 6 November 2018

Overview
This year, we submitted seven new parts in total, including four basic parts and three composite parts. We took advantage on the BGI China special gene synthesis promotion offer in August this year to synthesize our basic parts, such as coding sequence, RBS, promoter and signal peptide separately. The composite parts were generated using a combination of PCR, restriction ligation and 3A assembly methods. All submitted parts are RFC10 compatible.
All parts
Name Type Description Designer Length
BBa_K2593001 coding Hyaluronic acid synthase protein Hong Chen 1254
BBa_K2593003 coding Signal peptide Hong Chen 99
BBa_K2593004 coding Leech Hyaluronic acid hydrolase protein (58KDa) Huimin Li 1470
BBa_K2593009 coding Leech Hyaluronic acid hydrolase protein with an exported signal peptide and 6His-tag at N-terminus Huimin Li 1686
BBa_K2593006 composite Leech Hyaluronic acid hydrolase with inducible promoter PlepA, RBS, an exporting signal peptide, 6Histag and a terminator Yongtao Lin 1962
BBa_K2593007 composite Hyaluronic acid synthase protein with inducible promoter, RBS, and a terminator. Yongtao Lin 2672
BBa_K2593008 composite UDP-glucose dehydrogenase and UDP-gulcose pyrophosphoryase with a constitutive promotor, RBS and a terminator. Hong Chen 2796
Basic parts
Name Type Description Designer Length
BBa_K2593001 coding Hyaluronic acid synthase protein Hong Chen 1254
BBa_K2593003 coding Signal peptide Hong Chen 99
BBa_K2593004 coding Leech Hyaluronic acid hydrolase protein (58KDa) Huimin Li 1470
BBa_K2593009 coding Leech Hyaluronic acid hydrolase protein with an exported signal peptide and 6His-tag at N-terminus Huimin Li 1686
Composite parts
Name Type Description Designer Length
BBa_K2593006 composite Leech Hyaluronic acid hydrolase with an inducible promoter PlepA, RBS, an exporting signal peptide, 6Histag and a terminator. Yongtao Lin 1962
BBa_K2593007 composite Hyaluronic acid synthase protein with inducible promoter, RBS, and a terminator. Yongtao Lin 2672
BBa_K2593008 composite UDP-glucose dehydrogenase and UDP-gulcose pyrophosphoryase with a constitutive promotor, RBS and a terminator. Hong Chen 2796
Improved parts
In our project, we added to the characterization of  an existing Biobrick , design by Philip Hartz from iGEM Saarland 2014. Our P43-tuaD-gtaB-T1 composite part was designed based on two BioBrick parts ( BBa_K1469002 and BBa_K1469005 ) created by Saarland. For example, co-expression of tuaD-gtaB as an operon under the control a constitutive promoter so that recombinant B. Subtilis 168 produces elevated level of HA.

Copyright © 2018 SSTi-SZGD All Rights Reserved.
Copyright © 2018 SSTi-SZGD All Rights Reserved.