Difference between revisions of "Team:Bielefeld-CeBiTec/Attributions"

(Prototype team page)
 
 
(82 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
{{Bielefeld-CeBiTec}}
+
{{:Team:Bielefeld-CeBiTec/Basic_Navbar}}
 +
 
 
<html>
 
<html>
 +
<head>
 +
<link rel="stylesheet" type="text/css"
 +
href="https://2018.igem.org/Team:Bielefeld-CeBiTec/CSS?action=raw&ctype=text/css" />
  
 +
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/4.7.0/css/font-awesome.min.css">
  
−
<div class="column full_size judges-will-not-evaluate">
+
<script>
−
<h3>★  ALERT! </h3>
+
−
<p>This page is used by the judges to evaluate your team for the <a href="https://2018.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2018.igem.org/Judging/Awards"> award listed below</a>. </p>
+
−
<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2018.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
+
−
</div>
+
  
 +
window.onscroll = function() {scrollFunction(); checkOffset();};
  
−
<div class="clear"></div>
+
function scrollFunction() {
 +
if (document.body.scrollTop > 20 || document.documentElement.scrollTop > 20) {
 +
document.getElementById("page-arrow-top").style.display = "block";
 +
} else {
 +
document.getElementById("page-arrow-top").style.display = "none";
 +
}
 +
}
  
 +
function checkOffset() {
 +
    if($('#page-arrow-top').offset().top + $('#page-arrow-top').height()
 +
                                          >= $('#footer').offset().top - 10)
 +
        $('#page-arrow-top').css('position', 'absolute');
 +
    if($(document).scrollTop() + window.innerHeight < $('#footer').offset().top)
 +
        $('#page-arrow-top').css('position', 'fixed'); // restore when you scroll up
 +
}
  
 +
function topFunction() {
 +
document.body.scrollTop = 0; // For Chrome, Safari and Opera
 +
document.documentElement.scrollTop = 0; // For IE and Firefox
 +
}
 +
</script>
  
 +
<style>
  
 +
</style>
 +
 +
</head>
 +
  
 +
<body>
  
−
<div class="column full_size">
+
   
−
<h1>Attributions</h1>
+
−
<p>This page is your opportunity to explain what parts of your project you did and what was done by technicians, advisers, etc. This requirement is not about literature references - these can and should be displayed throughout your wiki.
+
−
</p>
+
  
−
<h3> Bronze Medal Criterion #3</h3>
 
−
<p> All of the work done in your project must be attributed correctly on this page. You must clearly state the work that was done by the students on your team and note any work that was done by people outside of your team, including the host labs, advisors, instructors, and individuals not on the team roster.
 
−
<br><br>
 
−
Please see the <a href="https://2018.igem.org/Judging/Medals">Medals requirements page</a> for more details.</p>
 
−
</div>
 
  
  
−
<div class="clear extra_space"></div>
+
<div class="container">
  
 +
<div class="title_picture">
 +
<img src="https://static.igem.org/mediawiki/2018/5/50/T--Bielefeld-CeBiTec--petris_top_vk.png" style="width:100%">
 +
</div>
  
 +
        <div class="main_content">
 +
 +
<div class="title"> Attributions</div>
  
−
<div class="column third_size">
+
                    <article>
−
<h3> What should this page contain?</h3>
+
Experiments described in our wiki were carried out by members of the iGEM team Bielefeld-CeBiTec 2018 (see members page for details). Some very specific analyses were supported by other scientists from Bielefeld University, but executed by team members. In very few cases, we used commercial services for routine tasks like DNA synthesis, oligonucleotide synthesis or Sanger sequencing of parts (<a href="https://scf.cebitec.uni-bielefeld.de">Sequencing Core Facility</a>, CeBiTec, Bielefeld, Germany).
 +
We would like to thank everyone who supported our project. During our research, every member of our team gained unique skills and knowledge from several experts listed below.  </article>
 +
<h2>General Support</h2>
 +
<article>
 +
<b><a href="https://www.cebitec.uni-bielefeld.de/~joern">Prof. Dr. Jörn Kalinowski (1st PI)</a></b>gave us the opportunity to participate in iGEM by providing us with our own laboratory and the resources of his working group.<br>  
  
−
<ul>
+
<br/>
−
<li>Clearly state what the team accomplished</li>
+
<b><a href="http://www.cebitec.uni-bielefeld.de/~cruecker">Dr. Christian Rückert (2nd PI)</a></b> participated in our weekly team meetings and helped us with advice and assistance.
−
<li>General Support</li>
+
<br/>  
−
<li>Project support and advice</li>
+
<br/><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp;jsessionid=35CE32AE4583A5C14FB65DF7764E84D1.publ_ekvva?personId=71297283"><b>Julian Droste</a> (advisor), <a href="http://www.cebitec.uni-bielefeld.de/~bpucker">Boas Pucker</a> (advisor), <a href="http://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=137266368">Svenja Vinke</a> (advisor), <a href="http://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=137819627">Pascal Schmidt</a> (advisor), <a href="https://www.researchgate.net/profile/Marten_Linder">Marten Linder</a> (advisor) and <a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp;jsessionid=EC9E8A214A757837EE8C3B5EEC8FDCAB.publ_ekvva?personId=137819307">Carsten Hain</a> (advisor):</b> Special thanks to our advisors for supporting and encouraging us to realize all our ideas. <br/>
−
<li>Fundraising help and advice</li>
+
<br/>
−
<li>Lab support</li>
+
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=70814659">Laura Schlüter</a></b>we would like to thank her especially for her help with sponsoring questions.
−
<li>Difficult technique support</li>
+
<br/>
−
<li>Project advisor support</li>
+
<br/>
−
<li>Wiki support</li>
+
<b><a href="https://2017.igem.org/Team:Bielefeld-CeBiTec/Team">Max Edich</a></b> for providing helpful assists in the usage of HTML.
−
<li>Presentation coaching</li>
+
<br/>
−
<li>Human Practices support</li>
+
<br/>
−
<li> Thanks and acknowledgements for all other people involved in helping make a successful iGEM team</li>
+
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=70814576">Markus Haak</a></b>who advised us on communicating our software.
−
</ul>
+
<br/>
−
</div>
+
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp;jsessionid=1CF72009F7A7394DB2A27201FA3CD121.publ_ekvva?personId=106843136">Janina Lüders</a></b> we would like to thank her especially for the support conducting the panel discussion about Dual Use/Research of Concern.
 +
<br/>
  
−
<div class="column third_size">
+
</article>
−
<p>Tell us if your institution teaches an iGEM or synthetic biology class and when you started your project:</p>
+
−
<ul>
+
−
<li>Does your institution teach an iGEM or synthetic biology course?</li>
+
−
<li>When did you start this course?</li>
+
−
<li>Are the syllabus and course materials freely available online?</li>
+
−
<li>When did you start your brainstorming?</li>
+
−
<li>When did you start in the lab?</li>
+
−
<li>When did you start working on  your project?</li>
+
−
</ul>
+
−
</div>
+
  
 +
<h2>Experts</h2>
 +
<article>
 +
<br/>
 +
<b><a href="https://www.linkedin.com/in/benjamin-lehner-at">Benjamin Lehner</a></b>gave us advice for the printing with metal nanoparticles.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.ncl.ac.uk/nes/staff/profile/jonmarles-wright1.html#background">Dr. Jon Marles-Wright</a></b>supported us with advice about the purification of the Ferritin protein.
 +
<br/>
 +
<b><a href="https://www.wpi.edu/people/faculty/arguello">Prof. Dr. José Argüello</a></b>helped us a lot with good advice concerning the copper import system.
 +
<br/>
 +
<b><a href="https://www.hbicon.de/ueber-uns/unser-team">Dr. Rüdiger Gaydoul</a></b>gave us expertise about waste water treatment and the cross flow reactor application system.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.researchgate.net/profile/Kathryn_Nixdorff">Prof. em. Dr. Kathryn Nixdorff</a></b>supported us with a statement about Dual Use and Dual Use Research of Concern.
 +
<br/>
 +
<br/>
 +
<b><a href="https://igem.org/Safety/Security/PiersMillett">Dr. Piers Millet</a></b> gave us insight about Dual Use and Dual Use Research of Concern in the iGEM context.
 +
<br/>
 +
<br/>
 +
<b><a href="http://www.manuela-lenzen.de/">Dr. Manuela Lenzen</a></b> supported us with a statement of her point of view about Dual Use and Dual Use Research of Concern.
 +
<br/>
 +
</br>
 +
<b><a href="https://www.researchgate.net/profile/Carsten_Roller">Dr. Carsten Roller</a></b>,department manager training and career of VBIO, gave us a statement about Dual Use and Dual Use Research of Concern.
 +
</br>
  
−
<div class="column third_size">
 
−
<div class="highlight decoration_A_full">
 
  
−
<h3>Inspiration</h3>
+
</article>
−
<p>Take a look at what other teams have done:</p>
+
<h2>Material, Constructional and Analytical Support</h2>
−
<ul>
+
<article>
−
<li><a href="https://2011.igem.org/Team:Imperial_College_London/Team">2011 Imperial College London</a> (scroll to the bottom)</li>
+
The group <b><a href="https://www.cebitec.uni-bielefeld.de/index.php/research-groups/249-microbial-genomics-and-biotechnology">Microbial Genomics and Biotechnology</a></b> allowed us to use their laboratories and equipment and showed great patience when we occupied many of the facilities.
−
<li><a href="https://2014.igem.org/Team:Exeter/Attributions">2014 Exeter </a></li>
+
<br/>
−
<li><a href="https://2014.igem.org/Team:Melbourne/Attributions">2014 Melbourne </a></li>
+
We would like to thank the <b><a href="https://scf.cebitec.uni-bielefeld.de">Sequencing Core Facility</a></b>at the CeBiTec for sequencing all our parts.
−
<li><a href="https://2014.igem.org/Team:Valencia_Biocampus/Attributions">2014 Valencia Biocampus</a></li>
+
<br/>
−
</ul>
+
<br/>
−
</div>
+
<b><a href="https://www.cebitec.uni-bielefeld.de/~mferrari">Marga Ferrari</a></b>and <b><a href="https://www.cebitec.uni-bielefeld.de/~stefanw">Dr. Stefan Weidner</a></b>supported us regarding sponsoring and administrative questions.
−
</div>
+
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=40194">Prof. Dr. Andreas Hütten</a></b>helped us a lot with measuring our nanoparticles. He gave us advice on producing and manufacturing the nanoparticles.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.cebitec.uni-bielefeld.de/~kniehaus">Prof. Dr. Karsten Niehaus</a></b>gave us the possibility to identify the produced metal nanoparticles.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.researchgate.net/scientific-contributions/38267113_Uwe_Kahmann">Uwe Kahmann</a></b>gave us the possibility to identify the produced metal nanoparticles at a Transmission Electron Microscope.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=39174520">Dr. Inga Ennen</a></b>who told us how to identify our heavy metal nanoparticles on the Transmission Electron Microscope.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp;jsessionid=9B6FDF4DC942D31C1223BD04CC9EF7CA.publ_ekvva?personId=75264262">Timo Brändel</a></b>helped us to identify the produced metal nanoparticles at a Transmission Electron Microscope.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=70814549">Yannic Kerkhoff</a></b>for supporting us with the image analysis of the Transmission Electron Microscope images.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=4773911">Dr. Thorsten Seidel</a></b>supported us by allowing us to use the fluorescent microscope.
 +
<br/>
 +
<br/>
 +
<b><a href="http://www.cebitec.uni-bielefeld.de/~marcusp">Dr. Marcus Persicke</a></b> for supporting us with the LC-MS analysis for phytochelatin assay.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=12819405">Prof. Dr. Berthold Hoge</a>, <a href="https://www.uni-bielefeld.de/chemie/acii/hoge/DE/michaela.html">Michaela Schimmel</a></b>gave us metal salts so that we could conduct several toxicity tests.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.uni-bielefeld.de/chemie/ac1chair/">Prof. Dr. Thorsten Glaser</a></b>also provided us with metal salts for our toxicity tests.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.cebitec.uni-bielefeld.de/~puehler">Prof. Dr. Alfred Pühler</a>, <a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=77294157">Johanna Nelkner</a></b>gave us the bacterium <i>Pseudomonas brassicacearum</i> which we used as a template for heterologous gene expression.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=37324073">Prof. Dr. Kristian Müller</a></b>supported us with lab equipment.
 +
<br/>
 +
<br/>
 +
<b><a href="https://www.rag.de/ewigkeitsaufgaben/wasserhaltung/">Dr. Michael Drobniewski</a></b>works for the RAG and invited us to the mine facility Prosper-Haniel to talk to us about the water quality in the coal mines stretching over a wide area underneath North Rhine Westphalia.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=17507471">Dr. Dominik Cholewa</a></b>helped us much with our bioreactor modelling
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=26213">Dr. Andrea Viehhauser</a></b>allowed us to use the sonication device.
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=11022">Thomas Schäffer</a></b>helped us with the printing of our 3D model.
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=34459461">Dr. Stefan Hopp</a></b>supported us with our toxicity modeling.
 +
<br/>
 +
<br/>
 +
<br/>
 +
<b><a href="https://ekvv.uni-bielefeld.de/pers_publ/publ/PersonDetail.jsp?personId=10341417">Simon Schulz</a></b>and Lars Reinhardt</b> gave us the opportunity to use a special oven to sinter our nanoparticles.
 +
<br/>
 +
<br/>
 +
<b><a href="http://www.hertz879.de/menschen/thomas-rademacher/">Thomas Rademacher</a></b> and <b><a href="http://www.hertz879.de/">Hertz 87.9</a></b> helped us to produce our podcast about Dual Use and Dual Use Research of Concern.
 +
<br/>
 +
<br/>
 +
<b><a href="https://pub.uni-bielefeld.de/person/78554">Carola Eck</a></b>helped us conducting our MALDI-TOF measurements.
 +
<br/>
 +
<br/>
 +
<b>Marina Simunovic</b> provided us with great design ideas.
 +
<br/>
 +
<br/>
 +
<b>Christiane Widmann</b> provided us with delicious muffins.
 +
<br/>
  
 +
                    </article>
 +
 +
</div>
  
 +
<!-- Footer -->
 +
<footer id="footer" class="w3-container w3-padding-32 w3-center w3-black w3-xlarge" style="position: absolute; width:100%; z-index:200;">
 +
  <a class="footer-icon" href="https://www.facebook.com/igembielefeld/"> <i class="fa fa-facebook-official" ></i></a>
 +
  <a class="footer-icon" href="https://www.instagram.com/igem.bielefeld/?hl=de"><i class="fa fa-instagram"></i></a>
 +
  <a class="footer-icon" href="https://twitter.com/iGEM_Bielefeld"><i class="fa fa-twitter"></i></a>
 +
</footer>
  
−
<div class="clear extra_space"></div>
+
<img id="page-arrow-top"  src="https://static.igem.org/mediawiki/2018/7/7e/T--Bielefeld-CeBiTec--top_arrow_white_vk.png" style="width:3%" onclick="topFunction()"></img>
  
−
<div class="column two_thirds_size">
 
−
<h3> Why is this page needed? </h3>
 
−
<p>The Attribution requirement helps the judges know what you did yourselves and what you had help with. We don't mind if you get help with difficult or complex techniques, but you must report what work your team did and what work was done by others.</p>
 
−
<p>
 
−
For example, you might choose to work with an animal model during your project. Working with animals requires getting a license and applying far in advance to conduct certain experiments in many countries. This is difficult to achieve during the course of a summer, but much easier if you can work with a postdoc or PI who has the right licenses.</p>
 
 
</div>
 
</div>
  
−
<div class="column third_size">
+
</body>
−
<div class="highlight decoration_B_full">
+
−
<h3> Can we base our project on a previous one? </h3>
+
−
<p>Yes! You can have a project based on a previous team, or based on someone else's idea, <b>as long as you state this fact very clearly and give credit for the original project.</b> </p>
+
−
</div>
+
−
</div>
+
−
 
+
−
 
+
  
 
</html>
 
</html>

Latest revision as of 15:59, 6 December 2018

Attributions
Experiments described in our wiki were carried out by members of the iGEM team Bielefeld-CeBiTec 2018 (see members page for details). Some very specific analyses were supported by other scientists from Bielefeld University, but executed by team members. In very few cases, we used commercial services for routine tasks like DNA synthesis, oligonucleotide synthesis or Sanger sequencing of parts (Sequencing Core Facility, CeBiTec, Bielefeld, Germany). We would like to thank everyone who supported our project. During our research, every member of our team gained unique skills and knowledge from several experts listed below.

General Support

Prof. Dr. Jörn Kalinowski (1st PI)gave us the opportunity to participate in iGEM by providing us with our own laboratory and the resources of his working group.

Dr. Christian Rückert (2nd PI) participated in our weekly team meetings and helped us with advice and assistance.

Julian Droste (advisor), Boas Pucker (advisor), Svenja Vinke (advisor), Pascal Schmidt (advisor), Marten Linder (advisor) and Carsten Hain (advisor): Special thanks to our advisors for supporting and encouraging us to realize all our ideas.

Laura Schlüterwe would like to thank her especially for her help with sponsoring questions.

Max Edich for providing helpful assists in the usage of HTML.

Markus Haakwho advised us on communicating our software.

Janina Lüders we would like to thank her especially for the support conducting the panel discussion about Dual Use/Research of Concern.

Experts


Benjamin Lehnergave us advice for the printing with metal nanoparticles.

Dr. Jon Marles-Wrightsupported us with advice about the purification of the Ferritin protein.
Prof. Dr. José Argüellohelped us a lot with good advice concerning the copper import system.
Dr. Rüdiger Gaydoulgave us expertise about waste water treatment and the cross flow reactor application system.

Prof. em. Dr. Kathryn Nixdorffsupported us with a statement about Dual Use and Dual Use Research of Concern.

Dr. Piers Millet gave us insight about Dual Use and Dual Use Research of Concern in the iGEM context.

Dr. Manuela Lenzen supported us with a statement of her point of view about Dual Use and Dual Use Research of Concern.

Dr. Carsten Roller,department manager training and career of VBIO, gave us a statement about Dual Use and Dual Use Research of Concern.

Material, Constructional and Analytical Support

The group Microbial Genomics and Biotechnology allowed us to use their laboratories and equipment and showed great patience when we occupied many of the facilities.
We would like to thank the Sequencing Core Facilityat the CeBiTec for sequencing all our parts.

Marga Ferrariand Dr. Stefan Weidnersupported us regarding sponsoring and administrative questions.

Prof. Dr. Andreas Hüttenhelped us a lot with measuring our nanoparticles. He gave us advice on producing and manufacturing the nanoparticles.

Prof. Dr. Karsten Niehausgave us the possibility to identify the produced metal nanoparticles.

Uwe Kahmanngave us the possibility to identify the produced metal nanoparticles at a Transmission Electron Microscope.

Dr. Inga Ennenwho told us how to identify our heavy metal nanoparticles on the Transmission Electron Microscope.

Timo Brändelhelped us to identify the produced metal nanoparticles at a Transmission Electron Microscope.

Yannic Kerkhofffor supporting us with the image analysis of the Transmission Electron Microscope images.

Dr. Thorsten Seidelsupported us by allowing us to use the fluorescent microscope.

Dr. Marcus Persicke for supporting us with the LC-MS analysis for phytochelatin assay.

Prof. Dr. Berthold Hoge, Michaela Schimmelgave us metal salts so that we could conduct several toxicity tests.

Prof. Dr. Thorsten Glaseralso provided us with metal salts for our toxicity tests.

Prof. Dr. Alfred Pühler, Johanna Nelknergave us the bacterium Pseudomonas brassicacearum which we used as a template for heterologous gene expression.

Prof. Dr. Kristian Müllersupported us with lab equipment.

Dr. Michael Drobniewskiworks for the RAG and invited us to the mine facility Prosper-Haniel to talk to us about the water quality in the coal mines stretching over a wide area underneath North Rhine Westphalia.

Dr. Dominik Cholewahelped us much with our bioreactor modelling

Dr. Andrea Viehhauserallowed us to use the sonication device.

Thomas Schäfferhelped us with the printing of our 3D model.
Dr. Stefan Hoppsupported us with our toxicity modeling.


Simon Schulzand Lars Reinhardt gave us the opportunity to use a special oven to sinter our nanoparticles.

Thomas Rademacher and Hertz 87.9 helped us to produce our podcast about Dual Use and Dual Use Research of Concern.

Carola Eckhelped us conducting our MALDI-TOF measurements.

Marina Simunovic provided us with great design ideas.

Christiane Widmann provided us with delicious muffins.