Difference between revisions of "Team:RHIT/Parts"

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<a href = "https://2018.igem.org/Team:RHIT/Composite_Part"> Composite Part </a> <br>
 
<a href = "https://2018.igem.org/Team:RHIT/Composite_Part"> Composite Part </a> <br>
 
<a href = "https://2018.igem.org/Team:RHIT/Part_Collection"> Collection </a> <br>
 
<a href = "https://2018.igem.org/Team:RHIT/Part_Collection"> Collection </a> <br>
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<h1>Parts</h1>
 
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
 
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
 
 
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<h3>Note</h3>
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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<h3>Adding parts to the registry</h3>
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
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<h4> Plasmid 1 Parts </h4>
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
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<a href="http://parts.igem.org/Add_a_Part_to_the_Registry">
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ADD PARTS
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<h3>Inspiration</h3>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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<li> BBa_K2716000 - Optimized Double-Mutant PETase <br> <br>PETase is an aromatic polyesterase that breaks PET into MHET, as well as some terephthalic acid and BHET. The double-mutated optimized PETase contains a S238F/W159H mutation, allowing for a more efficient enzyme. </li>
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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<li> BBa_K2716002 - MHETase <br> <br> MHETase breaks MHET into terephthalic acid and ethylene glycol. </li>
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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<li> BBa_K2716100 - Complete Plasmid 1 <br><br> This composite part contains a promoter, a ribosomal binding site, the double-mutated optimized PETase, a secretion tag (pelB), MHETase, and a terminator. PETase is an aromatic polyesterase that breaks PET into MHET, as well as some terephthalic acid and BHET. The double-mutated optimized PETase contains a S238F/W159H mutation, allowing for a more efficient enzyme. PelB is a secretion tag that will allow the PETase enzyme to be secreted outside of the cell. This increases the efficiency of the PET breakdown. MHETase breaks MHET into terephthalic acid and ethylene glycol. The second secretion tag is added so that the MHETase enzyme will also be secreted. </li>
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<li> BBa_K2716101 - Promoter+RBS+pelB+PETase <br><br> This composite part contains a promoter, a ribosomal binding site, the double-mutated optimized PETase, and a secretion tag (pelB). PETase is an aromatic polyesterase that breaks PET into MHET, as well as some terephthalic acid and BHET. The double-mutated optimized PETase contains a S238F/W159H mutation, allowing for a more efficient enzyme. PelB is a secretion tag that will allow the PETase enzyme to be secreted outside of the cell. This increases the efficiency of the PET breakdown. </li>
 
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Revision as of 18:36, 9 August 2018




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Basic Part
Composite Part
Collection

Plasmid 1 Parts

  • BBa_K2716000 - Optimized Double-Mutant PETase

    PETase is an aromatic polyesterase that breaks PET into MHET, as well as some terephthalic acid and BHET. The double-mutated optimized PETase contains a S238F/W159H mutation, allowing for a more efficient enzyme.
  • BBa_K2716002 - MHETase

    MHETase breaks MHET into terephthalic acid and ethylene glycol.
  • BBa_K2716100 - Complete Plasmid 1

    This composite part contains a promoter, a ribosomal binding site, the double-mutated optimized PETase, a secretion tag (pelB), MHETase, and a terminator. PETase is an aromatic polyesterase that breaks PET into MHET, as well as some terephthalic acid and BHET. The double-mutated optimized PETase contains a S238F/W159H mutation, allowing for a more efficient enzyme. PelB is a secretion tag that will allow the PETase enzyme to be secreted outside of the cell. This increases the efficiency of the PET breakdown. MHETase breaks MHET into terephthalic acid and ethylene glycol. The second secretion tag is added so that the MHETase enzyme will also be secreted.
  • BBa_K2716101 - Promoter+RBS+pelB+PETase

    This composite part contains a promoter, a ribosomal binding site, the double-mutated optimized PETase, and a secretion tag (pelB). PETase is an aromatic polyesterase that breaks PET into MHET, as well as some terephthalic acid and BHET. The double-mutated optimized PETase contains a S238F/W159H mutation, allowing for a more efficient enzyme. PelB is a secretion tag that will allow the PETase enzyme to be secreted outside of the cell. This increases the efficiency of the PET breakdown.

What information do I need to start putting my parts on the Registry?

The information needed to initially create a part on the Registry is:

  • Part Name
  • Part type
  • Creator
  • Sequence
  • Short Description (60 characters on what the DNA does)
  • Long Description (Longer description of what the DNA does)
  • Design considerations

We encourage you to put up much more information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page.

<groupparts>iGEM18 RHIT</groupparts>