Difference between revisions of "Team:USTC-Software/ValidatedContribution"

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                     <h3 id="Getting Started">Getting Started</h3>
 
                     <h3 id="Getting Started">Getting Started</h3>
 
                         <p>Have a first look at our website. There are three tags which are <b>reports</b>, <b>iGEMers</b>.</p>
 
                         <p>Have a first look at our website. There are three tags which are <b>reports</b>, <b>iGEMers</b>.</p>
 +
<img src="https://static.igem.org/mediawiki/2018/f/f5/T--USTC-Software--editor_reports.png" width="100%">
 
                         <p><b>Reports</b> shows some most poplular reports which are recommended by our algorithm. Click these articles and you can see what your partners are doing. Feel free to leave a comment on these reports.</p>
 
                         <p><b>Reports</b> shows some most poplular reports which are recommended by our algorithm. Click these articles and you can see what your partners are doing. Feel free to leave a comment on these reports.</p>
 
<p><b>iGEMers</b> is a fuxin part of our website. In this part, you can find those persons who share a common interest.</p>
 
<p><b>iGEMers</b> is a fuxin part of our website. In this part, you can find those persons who share a common interest.</p>
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                     <h3 id="Apply An Account">Apply An Account</h3>
 
                     <h3 id="Apply An Account">Apply An Account</h3>
 
                         <p>Now, let's apply an account to enjoy Biohub 3.0. In the right of navigator located <b>Sign in</b> and <b>Register</b> buttons. Click the <b>Register</b> button to apply a new account. <b>We promise to protect users privacy.</b></p>
 
                         <p>Now, let's apply an account to enjoy Biohub 3.0. In the right of navigator located <b>Sign in</b> and <b>Register</b> buttons. Click the <b>Register</b> button to apply a new account. <b>We promise to protect users privacy.</b></p>
 +
<img src="https://static.igem.org/mediawiki/2018/e/e9/T--USTC-Software--sign_up.png" width="100%">
 
                         <p>Look! A lovely panda is shaking its hands to welcome you once you hang your mouse over it.</p>
 
                         <p>Look! A lovely panda is shaking its hands to welcome you once you hang your mouse over it.</p>
 
<div class="divider"></div>
 
<div class="divider"></div>
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                         <p>We divide an experiment report into three parts: <b>Info</b>, <b>Protocols</b> and <b>Result</b></p>
 
                         <p>We divide an experiment report into three parts: <b>Info</b>, <b>Protocols</b> and <b>Result</b></p>
 
<p>Here is the appearance of our <b>editor</b> and it initials an empty report when the <b>editor</b> button on the top is clicked:</p>
 
<p>Here is the appearance of our <b>editor</b> and it initials an empty report when the <b>editor</b> button on the top is clicked:</p>
 +
<img src="https://static.igem.org/mediawiki/2018/5/56/T--USTC-Software--editor_main.png" width="100%">
 
<p>In the Info block, you can input title, labels and abstract like this:</b>
 
<p>In the Info block, you can input title, labels and abstract like this:</b>
 +
<img src="https://static.igem.org/mediawiki/2018/6/67/T--USTC-Software--editor_info.png" width="100%">
 
<p>The left sider is a toolbox that contains <b>Protocols</b> and <b>steps</b>. You can see there are some several steps and protocol that is created for you, you can create more steps and protocols as you wish.</p>
 
<p>The left sider is a toolbox that contains <b>Protocols</b> and <b>steps</b>. You can see there are some several steps and protocol that is created for you, you can create more steps and protocols as you wish.</p>
 
<p>Now let's click a <b>Add</b> step to see what will happen.</p>
 
<p>Now let's click a <b>Add</b> step to see what will happen.</p>
 +
<img src="https://static.igem.org/mediawiki/2018/f/f4/T--USTC-Software--editor_step.png" width="100%">
 
<p>A new <b>Centifuge</b> Step is inserted into the report. The only thing you need to do is to fill some blanks. That is how you record a '12000 rpm centifuge for 30 s at 25 degree.'. Is that amazing? But we can make it much more faster.</p>
 
<p>A new <b>Centifuge</b> Step is inserted into the report. The only thing you need to do is to fill some blanks. That is how you record a '12000 rpm centifuge for 30 s at 25 degree.'. Is that amazing? But we can make it much more faster.</p>
 
<p><b>protocol</b> is a set of steps or a template. Let's try <b>Gel Extraction</b>.</p>
 
<p><b>protocol</b> is a set of steps or a template. Let's try <b>Gel Extraction</b>.</p>
 
<p>A serial of steps is inserted into your report and most of these blanks is accomplished by our templates.</p>
 
<p>A serial of steps is inserted into your report and most of these blanks is accomplished by our templates.</p>
 
<p>It is true that the available <b>steps</b> and <b>protocol</b> are not able to meet all your demands. But you can create new steps and protocol. Here is an example:</p>
 
<p>It is true that the available <b>steps</b> and <b>protocol</b> are not able to meet all your demands. But you can create new steps and protocol. Here is an example:</p>
 +
<img src="https://static.igem.org/mediawiki/2018/2/29/T--USTC-Software--editor_new.png" width="100%">
 
<p>A new <b>step</b> called <b>Add something into burette</b> is created in the step bar and you can insert it into your report.</b>
 
<p>A new <b>step</b> called <b>Add something into burette</b> is created in the step bar and you can insert it into your report.</b>
 
<p><b>Environment Variable</b> is another way to help you to accomplish your writing.Click the <b>VAR</b> button and define some variables.</p>
 
<p><b>Environment Variable</b> is another way to help you to accomplish your writing.Click the <b>VAR</b> button and define some variables.</p>
 +
<img src="https://static.igem.org/mediawiki/2018/2/2c/T--USTC-Software--editor_var.png" width="100%">
 +
 
<p>In that way, the <b>editor</b> will replace all <b>@v1</b> pattern  into <b>30</b> and <b>@v2</b> pattern into <b>PCR</b> in the report.</p>
 
<p>In that way, the <b>editor</b> will replace all <b>@v1</b> pattern  into <b>30</b> and <b>@v2</b> pattern into <b>PCR</b> in the report.</p>
 
<p>The third section of a report is results. In this section, it is free to insert some texts, pictures, lists and tables to record the results.</p>
 
<p>The third section of a report is results. In this section, it is free to insert some texts, pictures, lists and tables to record the results.</p>
 
<p>Click these buttons on the right side of editor to insert them into your report.</p>
 
<p>Click these buttons on the right side of editor to insert them into your report.</p>
 +
<img src="https://static.igem.org/mediawiki/2018/1/1a/T--USTC-Software--editor_result.png" width="100%">
 +
 
<p>If you can not find those buttons, click the little blue cat button.</p.>
 
<p>If you can not find those buttons, click the little blue cat button.</p.>
 
<p>After finishing editing, click the <b>Save</b> button to save it and <b>preview</b> button to have a look of your work.</p>
 
<p>After finishing editing, click the <b>Save</b> button to save it and <b>preview</b> button to have a look of your work.</p>
 +
<img src="https://static.igem.org/mediawiki/2018/1/11/T--USTC-Software--editor_preview.png" width="100%">
 +
 
<p>You can see all sentences are produced automatically. Click <b>Export</b> button to download your work in <b>PDF</b>.</p>
 
<p>You can see all sentences are produced automatically. Click <b>Export</b> button to download your work in <b>PDF</b>.</p>
 
<div class="divider"></div>
 
<div class="divider"></div>
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<p>We support a integration search that connected to more than 50 websites like NLM, PubMed, PMC and so on.</p>
 
<p>We support a integration search that connected to more than 50 websites like NLM, PubMed, PMC and so on.</p>
 
<p><b>Bio-bricks</b> is the traditional function in Biohub 2.0, and it will be supported in the long term. <b>BLAST</b> is useful to search gene segment like <b>AGGT'</b></p>
 
<p><b>Bio-bricks</b> is the traditional function in Biohub 2.0, and it will be supported in the long term. <b>BLAST</b> is useful to search gene segment like <b>AGGT'</b></p>
 +
<img src="https://static.igem.org/mediawiki/2018/3/34/T--USTC-Software--search.png" width="100%">
 
<div class="divider"></div>
 
<div class="divider"></div>
 
<h3 id="Society">Society</h3>
 
<h3 id="Society">Society</h3>
 
<p>You can see the details of all reports and leave a comment or like the report. In that way, the author will receive the feeds.</p>
 
<p>You can see the details of all reports and leave a comment or like the report. In that way, the author will receive the feeds.</p>
−
<p>In that way,we build a scientific society where academic discussion is possible</p>
+
<p>In that way,we build a scientific society where academic discussion is possible.</p>
 +
<img src="https://static.igem.org/mediawiki/2018/4/42/T--USTC-Software--society_1.png" width="100%">
 
<div class="divider"></div>
 
<div class="divider"></div>
 
<h3 id="For More Information">For More Information</h3>
 
<h3 id="For More Information">For More Information</h3>

Revision as of 20:27, 16 October 2018

Validated Contribution

Overview

The brand new BioHub 3.0 has arrived to make your job easier than ever before. This year we bring you a new way to edit your reports and search whatever you need in one step. Here are some new features:

      An editor which can automatically compile your experimental reports.
      An intelligent search engine based on machine learning.
      A society that shares your ideas.

Click here to take it a try. You'll learn how to get started and gain confidence that Biohub 3.0 can do whatever you need it to do.

FeedBack

All we want to do is to make your work easier and we want to make it even further. If you have any suggestions, please create issues on our Github repository.

Getting Started

Have a first look at our website. There are three tags which are reports, iGEMers.

Reports shows some most poplular reports which are recommended by our algorithm. Click these articles and you can see what your partners are doing. Feel free to leave a comment on these reports.

iGEMers is a fuxin part of our website. In this part, you can find those persons who share a common interest.

Apply An Account

Now, let's apply an account to enjoy Biohub 3.0. In the right of navigator located Sign in and Register buttons. Click the Register button to apply a new account. We promise to protect users privacy.

Look! A lovely panda is shaking its hands to welcome you once you hang your mouse over it.

Edit A New Report

This online editor is a good way to recording your experiment. Once finishing reading this brief guide, you will know how fast and how easy we can achieve this goal.

We divide an experiment report into three parts: Info, Protocols and Result

Here is the appearance of our editor and it initials an empty report when the editor button on the top is clicked:

In the Info block, you can input title, labels and abstract like this:

The left sider is a toolbox that contains Protocols and steps. You can see there are some several steps and protocol that is created for you, you can create more steps and protocols as you wish.

Now let's click a Add step to see what will happen.

A new Centifuge Step is inserted into the report. The only thing you need to do is to fill some blanks. That is how you record a '12000 rpm centifuge for 30 s at 25 degree.'. Is that amazing? But we can make it much more faster.

protocol is a set of steps or a template. Let's try Gel Extraction.

A serial of steps is inserted into your report and most of these blanks is accomplished by our templates.

It is true that the available steps and protocol are not able to meet all your demands. But you can create new steps and protocol. Here is an example:

A new step called Add something into burette is created in the step bar and you can insert it into your report.

Environment Variable is another way to help you to accomplish your writing.Click the VAR button and define some variables.

In that way, the editor will replace all @v1 pattern into 30 and @v2 pattern into PCR in the report.

The third section of a report is results. In this section, it is free to insert some texts, pictures, lists and tables to record the results.

Click these buttons on the right side of editor to insert them into your report.

If you can not find those buttons, click the little blue cat button.

After finishing editing, click the Save button to save it and preview button to have a look of your work.

You can see all sentences are produced automatically. Click Export button to download your work in PDF.

Our Search Engine is much more intelligent and useful than Biohub 2.0.

It not only supports searching Users or Articles, but alse supports customize filter and sort rules in natural language. It means we support the sentenses like 'reports by Jiyan in this year' or 'reports with label PCR'. It is gorgeous and easy to use.

We support a integration search that connected to more than 50 websites like NLM, PubMed, PMC and so on.

Bio-bricks is the traditional function in Biohub 2.0, and it will be supported in the long term. BLAST is useful to search gene segment like AGGT'

Society

You can see the details of all reports and leave a comment or like the report. In that way, the author will receive the feeds.

In that way,we build a scientific society where academic discussion is possible.

For More Information

If you want to learn more about Biohub 3.0, please contact us on Github