Difference between revisions of "Team:Bilkent-UNAMBG"

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 +
<html>
 +
 +
<script>
 +
 +
// This is the jquery part of your template. 
 +
// Try not modify any of this code too much since it makes your menu work.
 +
 +
$(document).ready(function() {
 +
 +
$("#HQ_page").attr('id','');
 +
 +
// call the functions that control the menu
 +
menu_functionality();
 +
hide_show_menu();
 +
 +
 +
 +
//this function controls the expand and collapse buttons of the menu and changes the +/- symbols
 +
function menu_functionality() {
 +
 +
//when clicking on a "menu_button", it will change the "+/-" accordingly and it will show/hide the corresponding submenu
 +
$(".menu_button").click(function(){
 +
 +
// add or remove the class "open" , this class holds the "-"
 +
$(this).children().toggleClass("open");
 +
// show or hide the submenu
 +
$(this).next('.submenu_wrapper').fadeToggle(400);
 +
});
 +
 +
// when the screen size is smaller than 800px, the display_menu_control button appears and will show/hide the whole menu
 +
$("#display_menu_control").click(function(){
 +
$('#menu_content').fadeToggle(400);
 +
});
 +
 +
// call the current page highlight function
 +
highlight_current_page();
 +
}
 +
 +
 +
// call the highlight current page function to show it on the menu with a different background color
 +
function highlight_current_page() {
 +
 +
// select a page from the menu based on the id assigned to it and the current page name and add the class "current page" to make it change background color
 +
$("#"+  wgPageName.substring(wgPageName.lastIndexOf("/")+1, wgPageName.length ) + "_page").addClass("current_page");
 +
 +
// now that the current_page class has been added to a menu item, make the submenu fade in
 +
$(".current_page").parents(".submenu_wrapper").fadeIn(400);
 +
// change the +/- symbol of the corresponding menu button
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$(".current_page").parents(".submenu_wrapper").prev().children().toggleClass("open");
 +
 +
}
 +
 +
 +
 +
// allow button on the black menu bar to show/hide the side menu
 +
function hide_show_menu() {
 +
 +
// in case you preview mode is selected, the menu is hidden for better visibility
 +
if (window.location.href.indexOf("submit") >= 0) {
 +
$(".igem_2017_menu_wrapper").hide();
 +
}
 +
 +
// if the black menu bar has been loaded
 +
  if (document.getElementById('bars_item')) {
 +
 +
// when the "bars_item" has been clicked
 +
$("#bars_item").click(function() {
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$("#sideMenu").hide();
 +
 +
// show/hide the menu wrapper
 +
$(".igem_2017_menu_wrapper").fadeToggle("100");
 +
});
 +
  }
 +
 +
// because the black menu bars loads at a different time than the rest of the page, this function is set on a time out so it can run again in case it has not been loaded yet
 +
else {
 +
    setTimeout(hide_show_menu, 15);
 +
}
 +
}
 +
 +
 +
});
 +
 +
 +
</script>
 +
 +
 +
 +
 +
 +
<style>
 +
 +
 +
 +
/***************************************************** DEFAULT WIKI SETTINGS  ****************************************************/
 +
 +
/* Clear the default wiki settings */
 +
 +
#home_logo, #sideMenu { display:none; }
 +
#sideMenu, #top_title, .patrollink  {display:none;}
 +
#content { width:100%; padding:0px;  margin-top:-7px; margin-left:0px;}
 +
body {background-color:white; }
 +
#bodyContent h1, #bodyContent h2, #bodyContent h3, #bodyContent h4, #bodyContent h5 { margin-bottom: 0px; }
 +
 +
 +
 +
 +
/**************************************************************** MENU ***************************************************************/
 +
/* Wrapper for the menu */
 +
.igem_2017_menu_wrapper {
 +
width: 15%;
 +
height:100vh;
 +
position:fixed;
 +
right:0%;
 +
padding:0px;
 +
float:right;
 +
border-left: 1px solid #d3d3d3;
 +
background-color:#dddddd;
 +
text-align:left;
 +
font-family:Tahoma, Geneva, sans-serif;
 +
overflow-y: auto;
 +
overflow-x: hidden;
 +
}
 +
 +
/* this hides the scrollbar to keep view consistency */
 +
.igem_2017_menu_wrappe::-webkit-scrollbar {
 +
display: none;
 +
}
 +
 +
 +
/* styling for links in the menu, removes the line under text */
 +
.igem_2017_menu_wrapper a { 
 +
text-decoration: none;
 +
}
 +
 +
 +
/* styling for the images in the menu */
 +
.igem_2017_menu_wrapper img {
 +
width: 100%;
 +
}
 +
 +
/* styling for the menu buttons */
 +
.igem_2017_menu_wrapper .menu_button {
 +
width: 100%;
 +
padding: 10px 0px 10px 15px;
 +
float:left;
 +
border-bottom: 1px solid #d3d3d3;
 +
font-size: 12px;
 +
font-weight: bold;
 +
color: #5e5f5f;
 +
cursor: pointer;
 +
}
 +
 +
 +
.igem_2017_menu_wrapper .menu_bottom_padding {
 +
width: 100%;
 +
height: 30px;
 +
float:left;
 +
}
 +
 +
.menu_button.direct_to_page {
 +
padding-left: 36px;
 +
}
 +
 +
 +
.igem_2017_menu_wrapper .menu_button .expand_collapse_icon {
 +
width:10%;
 +
float:left;
 +
}
 +
 +
.igem_2017_menu_wrapper .menu_button .expand_collapse_icon::before {
 +
content: "+"; 
 +
}
 +
 +
.open::before {
 +
content: "-" !important; 
 +
}
 +
 +
 +
 +
/* styling for the menu buttons on hover */
 +
.igem_2017_menu_wrapper .menu_button:hover, .igem_2017_menu_wrapper .submenu_button:hover ,  .submenu_button.current_page:hover {
 +
background-color: #3399ff;
 +
text-decoration: none;
 +
color:#ffffff;
 +
}
 +
 +
/* styling for the menu button when it is the current page */
 +
.current_page {
 +
background-color:#7fc1f7  !important;
 +
color:#5e5f5f !important;
 +
}
 +
 +
 +
/* styling for the submenu buttons */
 +
.igem_2017_menu_wrapper .submenu_button {
 +
width: 100%;
 +
padding: 10px 0px 10px 34px;
 +
float:left;
 +
background-color:#f2f2f2;
 +
border-bottom: 1px solid #d3d3d3;
 +
font-size: 12px;
 +
color: #5e5f5f;
 +
cursor: pointer;
 +
}
 +
 +
/* wrapper for the submenu items, they are hidden by default*/
 +
.igem_2017_menu_wrapper .submenu_wrapper {
 +
display:none;
 +
}
 +
 +
/* when the page size is bigger than 800px, this show/hide control is hidden by default */
 +
.igem_2017_menu_wrapper #display_menu_control {
 +
display:none;
 +
text-align:center;
 +
}
 +
 +
 +
/***************************************************** CONTENT OF THE PAGE ****************************************************/
 +
 +
/* Wrapper for the content */
 +
.igem_2017_content_wrapper {
 +
width: 81%;
 +
margin: 2%;
 +
display:block;
 +
float:left;
 +
background-color:white;
 +
font-family:Tahoma, Geneva, sans-serif;
 +
}
 +
 +
 +
/********************************* HTML STYLING  *********************************/
 +
 +
/* styling for the titles h1 h2 */
 +
.igem_2017_content_wrapper h1, .igem_2017_content_wrapper h2 {
 +
padding:5px 15px;
 +
border-bottom: 0px;
 +
color: #3399ff;
 +
}
 +
 +
 +
/* styling for the titles  h3 h4 h5 h6*/
 +
.igem_2017_content_wrapper h3, .igem_2017_content_wrapper h4, .igem_2017_content_wrapper h5, .igem_2017_content_wrapper h6 {
 +
padding:5px 15px;
 +
border-bottom:0px;
 +
color: #000000; 
 +
}
 +
 +
 +
/* font and text */
 +
.igem_2017_content_wrapper p {
 +
padding: 0px 15px;
 +
font-size: 13px;
 +
}
 +
 +
/* Links */
 +
.igem_2017_content_wrapper a {
 +
font-weight: bold;
 +
text-decoration: underline;
 +
text-decoration-color: #3399ff;
 +
color:  #3399ff;
 +
-webkit-transition: all 0.4s ease;
 +
-moz-transition: all 0.4s ease;
 +
-ms-transition: all 0.4s ease;
 +
-o-transition: all 0.4s ease;
 +
transition: all 0.4s ease;
 +
}
 +
 +
/* hover for the links */
 +
.igem_2017_content_wrapper a:hover {
 +
text-decoration:none;
 +
color:#000000;
 +
}
 +
 +
/* non numbered lists */
 +
.igem_2017_content_wrapper ul {
 +
padding:0px 20px;
 +
font-size: 13px;
 +
font-family:Tahoma, Geneva, sans-serif;
 +
}
 +
 +
/* numbered lists */
 +
.igem_2017_content_wrapper ol {
 +
padding:0px;
 +
font-size: 13px;
 +
font-family:Tahoma, Geneva, sans-serif;
 +
}
 +
 +
/* Table */
 +
.igem_2017_content_wrapper table {
 +
width: 97%;
 +
margin:15px 10px;
 +
border: 1px solid #d3d3d3;
 +
border-collapse: collapse;
 +
}
 +
 +
/* table cells */
 +
.igem_2017_content_wrapper  td {
 +
padding: 10px;
 +
vertical-align: text-top;
 +
border: 1px solid #d3d3d3;
 +
border-collapse: collapse;
 +
}
 +
 +
/* table headers */
 +
.igem_2017_content_wrapper th {
 +
padding: 10px;
 +
vertical-align: text-top;
 +
border: 1px solid #d3d3d3;
 +
border-collapse: collapse;
 +
background-color:#f2f2f2;
 +
}
 +
 +
 +
/**********************************LAYOUT CLASSES **********************************/
 +
 +
/* general class for column divs */
 +
.igem_2017_content_wrapper .column  {
 +
padding: 10px 0px;
 +
float:left;
 +
}
 +
 +
/* class for a full width column */
 +
.column .full_size {
 +
width:100%;
 +
}
 +
 +
/* styling for images in a full width column*/
 +
.column.full_size img {
 +
width:97%;
 +
padding: 10px 15px;
 +
}
 +
 +
/* class for a half width column */
 +
.column.half_size {
 +
width: 50%;
 +
}
 +
/* styling for images in a half width column*/
 +
.column.half_size img {
 +
width: 94.5%;
 +
padding: 10px 15px;
 +
}
 +
 +
 +
 +
 +
/********************************* SUPPORT CLASSES ********************************/
 +
 +
/* class that clears content below*/
 +
.igem_2017_content_wrapper .clear {
 +
clear:both;
 +
}
 +
 +
 +
/* adds extra spacing when clearing content */
 +
.igem_2017_content_wrapper  .clear.extra_space {
 +
height: 30px;
 +
}
 +
 +
 +
/* highlight class, makes content slightly smaller */
 +
.igem_2017_content_wrapper .highlight {
 +
margin: 0px 15px;
 +
padding: 15px 0px;
 +
}
 +
 +
 +
/* highlight class, adds a gray background */
 +
.igem_2017_content_wrapper .highlight.gray {
 +
background-color: #f2f2f2;
 +
}
 +
 +
/* highlight with decoration blue line on top */
 +
.igem_2017_content_wrapper .highlight.blue_top {
 +
    border-top: 4px solid #3399ff;
 +
}
 +
 +
/* highlight with a full blue border decoration */
 +
.igem_2017_content_wrapper .highlight.blue_border {
 +
    border: 4px solid  #3399ff;
 +
}
 +
 +
 +
/* button class */
 +
.igem_2017_content_wrapper .button{
 +
max-width: 35%;
 +
margin: 30px auto;
 +
padding: 12px 10px;
 +
    background-color: #3399ff;
 +
    text-align: center;
 +
  color: #ffffff;
 +
-webkit-transition: all 0.4s ease;
 +
-moz-transition: all 0.4s ease;
 +
-ms-transition: all 0.4s ease;
 +
-o-transition: all 0.4s ease; transition: all 0.4s ease; 
 +
}
 +
 +
/* styling for button on hover */
 +
.igem_2017_content_wrapper .button:hover{
 +
background-color: #3399ff;
 +
    color: #000000;
 +
}
 +
 +
 +
 +
 +
/***************************************************** RESPONSIVE STYLING ****************************************************/
 +
 +
/* IF THE SCREEN IS LESS THAN 1200PX */
 +
@media only screen and (max-width: 1200px) {
 +
 +
#content {width:100%; }
 +
.igem_2017_menu_wrapper {width:15%; right:0;}
 +
.highlight {padding:10px 0px;}
 +
.igem_2017_menu_wrapper #display_menu_control { display:none; }
 +
#menu_content { display:block;}
 +
.menu_button.direct_to_page {padding-left: 17px;}
 +
 +
}
 +
 +
/* IF THE SCREEN IS LESS THAN 800PX */
 +
@media only screen and (max-width: 800px) {
 +
 +
.igem_2017_menu_wrapper { width:100%; height: 15%; position:relative; left:0%;}
 +
.igem_2017_content_wrapper {width:100%; margin-left:0px;}
 +
.column.half_size  {width:100%; }
 +
.column.full_size img, .column.half_size img {  width: 100%; padding: 10px 0px;}
 +
.highlight {padding:15px 5px;}
 +
.igem_2017_menu_wrapper #display_menu_control { display:block; }
 +
#menu_content { display:none;}
 +
.igem_2017_menu_wrapper .menu_button .expand_collapse_icon { width: 5%; }
 +
.menu_bottom_padding {display:none;}
 +
.menu_button.direct_to_page { padding-left: 36px; }
 +
}
 +
 +
 +
 +
 +
/* special class that the system uses to make sure the team wants a page to be evaluated */
 +
.judges-will-not-evaluate {
 +
    width: 96.6%;
 +
  margin: 5px 15px;
 +
  display: block;
 +
border: 4px solid #3399ff;
 +
    font-weight: bold;
 +
}
 +
 +
</style>
 +
 +
 +
<!--- THIS IS WHERE THE HTML BEGINS --->
 +
 +
 +
 +
<head>
 +
 +
<!-- This tells the browser that your page is responsive -->
 +
<meta name="viewport" content="width=device-width, initial-scale=1">
 +
 +
</head>
 +
 +
 +
 +
<div class="igem_2017_menu_wrapper" >
 +
 +
 +
 +
<a href="https://2017.igem.org/Team:Example2">
 +
<img src="https://static.igem.org/mediawiki/2018/8/8b/HQ_page_logo.jpg">
 +
</a>
 +
 +
 +
<!-- this div is hidden by default and will only be displayed if the screen size is too small -->
 +
<div class="menu_button" id="display_menu_control">
 +
MENU 
 +
</div>
 +
 +
<div id="menu_content">
 +
 +
 +
 +
 +
<a href="https://2017.igem.org/Team:Example2">
 +
<div class="menu_button direct_to_page">
 +
HOME
 +
</div>
 +
</a>
 +
 +
 +
 +
<div class="menu_button">
 +
<div class="expand_collapse_icon">  </div> TEAM
 +
</div>
 +
 +
<div class="submenu_wrapper" id="team_submenu">
 +
 +
<a href="https://2017.igem.org/Team:Example2/Team">
 +
<div class="submenu_button" id="Team_page">
 +
Team
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Collaborations">
 +
<div class="submenu_button"  id="Collaborations_page">
 +
Collaborations
 +
</div>
 +
</a>
 +
 +
 +
</div>
 +
 +
 +
 +
 +
 +
<div class="menu_button">
 +
<div class="expand_collapse_icon">  </div> PROJECT
 +
</div>
 +
 +
<!-- project submenu -->
 +
<div class="submenu_wrapper">
 +
 +
<a href="https://2017.igem.org/Team:Example2/Description">
 +
<div class="submenu_button"  id="Description_page">
 +
Description
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Design">
 +
<div class="submenu_button"  id="Design_page">
 +
Design
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Experiments">
 +
<div class="submenu_button"  id="Experiments_page">
 +
Experiments
 +
</div>
 +
</a>
 +
 +
 +
<a href="https://2017.igem.org/Team:Example2/Notebook">
 +
<div class="submenu_button"  id="Notebook_page">
 +
Notebook
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/InterLab">
 +
<div class="submenu_button"  id="InterLab_page">
 +
InterLab
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Contribution">
 +
<div class="submenu_button"  id="Contribution_page">
 +
Contribution
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Model">
 +
<div class="submenu_button"  id="Model_page">
 +
Model
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Results">
 +
<div class="submenu_button"  id="Results_page">
 +
Results
 +
</div>
 +
</a>
 +
 +
 +
<a href="https://2017.igem.org/Team:Example2/Demonstrate">
 +
<div class="submenu_button"  id="Demonstrate_page">
 +
Demonstrate
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Improve">
 +
<div class="submenu_button"  id="Improve_page">
 +
Improve
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Attributions">
 +
<div class="submenu_button"  id="Attributions_page">
 +
Attributions
 +
</div>
 +
</a>
 +
 +
</div>
 +
 +
 +
 +
 +
 +
 +
<div class="menu_button">
 +
<div class="expand_collapse_icon">  </div> PARTS
 +
</div>
 +
 +
<!-- parts submenu -->
 +
<div class="submenu_wrapper">
 +
 +
<a href="https://2017.igem.org/Team:Example2/Parts">
 +
<div class="submenu_button"  id="Parts_page">
 +
Parts
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Basic_Part">
 +
<div class="submenu_button"  id="Basic_Part_page">
 +
Basic Parts
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Composite_Part">
 +
<div class="submenu_button"  id="Composite_Part_page">
 +
Composite Parts
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/Part_Collection">
 +
<div class="submenu_button"  id="Part_Collection_page">
 +
Part Collection
 +
</div>
 +
</a>
 +
</div>
 +
 +
 +
 +
 +
 +
 +
<a href="https://2017.igem.org/Team:Example2/Safety">
 +
<div class="menu_button direct_to_page">
 +
SAFETY
 +
</div>
 +
</a>
 +
 +
 +
 +
 +
 +
 +
 +
<div class="menu_button" >
 +
<div class="expand_collapse_icon">  </div> HUMAN PRACTICES
 +
</div>
 +
 +
<!-- human practices submenu -->
 +
<div class="submenu_wrapper">
 +
 +
<a href="https://2017.igem.org/Team:Example2/HP/Silver">
 +
<div class="submenu_button"  id="Silver_page">
 +
Silver HP
 +
</div>
 +
</a>
 +
 +
<a href="https://2017.igem.org/Team:Example2/HP/Gold_Integrated">
 +
<div class="submenu_button" id="Gold_Integrated_page">
 +
Integrated and Gold
 +
</div>
 +
</a>
 +
 +
 +
<a href="https://2017.igem.org/Team:Example2/Engagement">
 +
<div class="submenu_button"  id="Engagement_page">
 +
Public Engagement
 +
</div>
 +
</a>
 +
 +
</div>
 +
 +
 +
<div class="menu_button">
 +
<div class="expand_collapse_icon">  </div> AWARDS
 +
</div>
 +
 +
<!-- awards submenu -->
 +
<div class="submenu_wrapper">
 +
 +
<a href="https://2017.igem.org/Team:Example2/Applied_Design">
 +
<div class="submenu_button"  id="Applied_Design_page">
 +
Applied Design
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</div>
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<h1>Bilkent-UNAMBG</h1>
 
<p style="margin: 0cm 0cm 0.0001pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-align: center; background-color: white; background-position: initial initial; background-repeat: initial initial;"><span style="font-family: calibri, sans-serif;"><strong><span style="font-size: 14pt; line-height: 28px;">PROJECT DESCRIPTION</span></strong></span></p>
 
<p style="margin: 0cm 0cm 0.0001pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-align: center; background-color: white; background-position: initial initial; background-repeat: initial initial;"><span style="font-family: calibri, sans-serif;"><strong><span style="font-size: 14pt; line-height: 28px;">PROJECT DESCRIPTION</span></strong></span></p>
 
<p style="margin: 0cm 0cm 0.0001pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-align: center; background-color: white; background-position: initial initial; background-repeat: initial initial;">&nbsp;</p>
 
<p style="margin: 0cm 0cm 0.0001pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-align: center; background-color: white; background-position: initial initial; background-repeat: initial initial;">&nbsp;</p>
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<img src="https://static.igem.org/mediawiki/2018/c/c0/T--Bilkent-UNAMBG--Picture2.png" />
 
<img src="https://static.igem.org/mediawiki/2018/c/c0/T--Bilkent-UNAMBG--Picture2.png" />
 
<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-indent: 36pt;"><span style="line-height: 22px; font-family: calibri, sans-serif;">&nbsp;</span></p>
 
<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-indent: 36pt;"><span style="line-height: 22px; font-family: calibri, sans-serif;">&nbsp;</span></p>
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<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none;">&nbsp;</p>
 
 
<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="font-family: calibri, sans-serif;"><strong><span style="line-height: 22px;">Figure 2.</span></strong><span style="line-height: 22px;">An illustrative representation of the idea behind the project&rsquo;s aim</span></span></p>
 
<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="font-family: calibri, sans-serif;"><strong><span style="line-height: 22px;">Figure 2.</span></strong><span style="line-height: 22px;">An illustrative representation of the idea behind the project&rsquo;s aim</span></span></p>
 
<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-indent: 36pt;"><span style="line-height: 22px; font-family: calibri, sans-serif;">&nbsp;</span></p>
 
<p style="margin: 0cm 0cm 10pt; line-height: 22px; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: #000000; color: #000000; font-variant-caps: normal; letter-spacing: normal; orphans: auto; text-align: start; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; text-indent: 36pt;"><span style="line-height: 22px; font-family: calibri, sans-serif;">&nbsp;</span></p>

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Bilkent-UNAMBG

PROJECT DESCRIPTION

 

Penicillin Bioremediation

Engineering Bacteria That Can Capture Penicillin in Waste Water

 

Existing problem and significance of the project

Nowadays antibiotics have become indispensable drugs for treatment of bacterial infections. Owing to this popularity, it comes as no surprise that most city waste water is contaminated with antibiotics. This is caused by several factors including antibiotic presence in human waste due to insufficient metabolism, as well as unnecessary usage of these drugs (Malay, 2015).  It is approximated that developing countries spend up to 35% of their budget to antibiotics (Isturiz, 2000; Saltoğlu, 2005). Moreover, it is especially in these countries where antibiotics are used incorrectly and unnecessarily (Hart, 1998).  In some countries it is actually legal to sell un-prescribed antibiotics in drug stores and even in supermarkets (Saltoğlu, 2005).

Considering that antibiotics cannot be purified by conventional aerobic sludge systems, they are detected in the water even after exposure to wastewater treatment, and as a result received to the surrounding environment. High antibiotic concentrations cause toxicity in organisms, damage the ecosystem and as an outcome dispersal of antibiotic resistance is observed. Antibiotics primarily mix with city waste water by getting carried via hospital water waste, resulting to significant damage of human population and microorganisms around the contamination site. Arguably, most detrimental damage caused by such contamination is emergence of super bugs in the ecosystem. Small but constant dose of antibiotics is perfect for such selection. Emergence of super bugs is a global problem and one day may cause most simple infections to become deadly. Taking into account what is aforementioned it is evident that before recycling use, waste water should be free of antibiotics. That is why detecting and degrading antibiotics in waste water is in upmost importance (Topal, 2013).

In medicine beta-lactam antibiotics are found to be the most commonly used ones. The oldest and most utilized one is penicillin (Topal, 2013; Yaşar, 2013). Seemingly, aiming for penicillin bioremediation is the most logical and efficient way to come with a solution to this problem.

Figure 1. Molecular structures of some antibiotics characterized by the presence of the beta-lactam ring

 

Description of the project

Our project aims to firstly express a penicillin binding peptide on biofilms in order to capture the penicillin on the bacteria cell’s surface, secondly to express proteins that can trap iron ions so that bacteria gains magnetic properties and finally filter bacteria with captured penicillin by means of a magnetic field. This would present a cheap and easy way to filter penicillin from waste water. Bacteria strain that is going to be used in our project (Escherichia coli) has no side effect on the environment. In addition to that, the proteins possessing magnetic properties are not going to be released in the water after being synthesized in the bacteria. Thus the resulting filtered water will be free of magnetic compounds.

 

Figure 2.An illustrative representation of the idea behind the project’s aim

 

 

 Furthermore, we aim to extend the scope of our project by capturing other types of antibiotics as well as other contaminants such as pesticides, insecticides and heavy metals from waste water. Our purpose is to develop this system such that it can be used in water refining facilities cost-effectively, with speed and ease.