Tefiducky8 (Talk | contribs) |
Tefiducky8 (Talk | contribs) |
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<title>C-lastin, Interlab</title> | <title>C-lastin, Interlab</title> | ||
<style> | <style> | ||
+ | |||
.ec--modeling--container{ | .ec--modeling--container{ | ||
padding-top: 100px; | padding-top: 100px; | ||
Line 20: | Line 21: | ||
.ec--img--wwd--cont{ | .ec--img--wwd--cont{ | ||
text-align: center; | text-align: center; | ||
− | |||
padding-top: 20px; | padding-top: 20px; | ||
padding-right: 20px; | padding-right: 20px; | ||
padding-bottom: 20px; | padding-bottom: 20px; | ||
− | padding-left: | + | padding-left: 20px; |
} | } | ||
.ec--modeling--items{ | .ec--modeling--items{ | ||
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} | } | ||
.ec--biobr--location--container{ | .ec--biobr--location--container{ | ||
+ | padding-top: 50px; | ||
padding-right: 25px; | padding-right: 25px; | ||
− | padding-bottom: | + | padding-bottom: 25px; |
− | padding-left: 25px; | + | padding-left: 25px; |
− | + | } | |
+ | .ec--h2{ | ||
+ | font-size: 25px; | ||
+ | font-weight: bolder; | ||
+ | display: block; | ||
+ | margin-top: 15px; | ||
+ | margin-bottom: 15px; | ||
+ | clear: both; | ||
+ | padding-top: 20px; | ||
+ | padding-bottom: 20px; | ||
} | } | ||
.ec--p{ | .ec--p{ | ||
Line 137: | Line 147: | ||
} | } | ||
− | + | a.lateral{ | |
− | + | color: black; | |
− | . | + | text-decoration: inherit; |
− | + | opacity: 1; | |
− | + | color: gray; | |
− | + | font-weight: 500; | |
− | + | font-size: 16px; | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
} | } | ||
− | . | + | a.inner-link--active { |
− | + | opacity: 1; | |
− | + | animation: bulge .5s ease; | |
− | + | -webkit-animation: bulge .5s ease; | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
} | } | ||
.ec--h3{ | .ec--h3{ | ||
Line 167: | Line 168: | ||
font-style: italic; | font-style: italic; | ||
} | } | ||
− | .ec-- | + | .ec--h4{ |
− | + | font-size: 18px; | |
− | + | font-weight: bolder; | |
− | + | display: block; | |
− | + | margin-top: 20px; | |
− | + | margin-bottom: 10px; | |
+ | clear: both; | ||
} | } | ||
Line 181: | Line 183: | ||
<body> | <body> | ||
− | + | <div class="ec--modeling--container"> | |
<div class="ec--first--section"> | <div class="ec--first--section"> | ||
<div class="ec--main--title"> | <div class="ec--main--title"> | ||
− | <a name=" | + | <a name="MOD" style="text-decoration: none;"><h1>PARTS</h1></a> |
− | < | + | |
− | + | ||
− | </ | + | |
− | </a> | + | |
</div> | </div> | ||
− | |||
− | |||
<div class="ec--modeling--items"> | <div class="ec--modeling--items"> | ||
− | < | + | <h3>Index</h3> |
− | + | <ul class="circle"> | |
− | + | <a href="#INT" style="text-decoration: none;color: #000000"><li>Introduction</li></a> | |
− | + | <a href="#BAC" style="text-decoration: none;color: #000000"><li>Bone and cartilage regeneration</li></a> | |
− | + | <a href="#ELA" style="text-decoration: none;color: #000000"><li>Elasticity</li></a> | |
− | + | <a href="#CELL" style="text-decoration: none;color: #000000"><li>Cellulose production </li></a> | |
− | + | ||
− | < | + | |
− | </li> | + | |
− | + | ||
− | + | ||
− | < | + | |
− | </li> | + | |
− | + | ||
− | + | ||
− | < | + | |
− | </li> | + | |
− | + | ||
− | + | ||
− | < | + | |
− | </li> | + | |
− | + | ||
− | + | ||
− | </a | + | |
− | + | ||
</ul> | </ul> | ||
</div> | </div> | ||
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<div class="ec--nau--content"> | <div class="ec--nau--content"> | ||
− | + | <div class="ec--sect--title"> | |
− | <div class="ec--h2"> | + | <a name="INT"><div class="ec--h2">INTRODUCTION</div></a> |
− | + | <div class="ec--p">The aim of our project is to obtain a novel bone and cartilage regeneration treatment. The path we take to carry out this was transforming E. coli to produce a fusion protein, conformed by a cellulose binding domain and a protein that induce chondrogenesis and osteogenesis, also a fusion protein conformed by CBD and an elastin like protein was design in order to obtain an elastic biomaterial. We also tried to produce cellulose in E. coli to have a better control in its production with a LacI repressed promoter. The parts are briefly described below (see the part page if more information is needed).</div> | |
+ | <a name="BAC"><div class="ec--h2">Fusion protein for bone and cartilage regeneration</div></a> | ||
+ | <div class="ec--h3">Coding parts</div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804000"><div class="ec--h4">BBa_K2804000 | ||
+ | |||
+ | </div></a> | ||
+ | CBD cipA with a C-terminal linker | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p">This part was design to try to improve the imperial college (2014) CBD cipA part BBa_K1321014, because the CBD N-terminal is where the protein binds to the cellulose and the linker could interfer with this interaction.</div> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804006"><div class="ec--h4">BBa_K2804006 | ||
+ | |||
+ | </div></a> | ||
+ | Superfolder GFP with six-histidine tail | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p">The adition of an histidine tail to part BBa_K1365020 was done because it allows the characterization of fusion proteins binding sites through atomic force microscopy, thanks to its affinity to the equipment nickel tip.</div> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804002"><div class="ec--h4">BBa_K2804002 | ||
+ | </div></a> | ||
+ | Bone morphogenetic protein 2 (BMP2) | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"> | ||
+ | <p>Bone morphogenetic protein 2 (BMP2), is a member of the transforming growth factor-β (TGF-β) super-family. It is involved in chondrogenesis and osteogenesis in vitro via the expression induction of Sox9, Runx2 and its downstream markers (Zhou et al., 2016).</p> | ||
+ | <p>Zhou, N., Li, Q., Lin, X. et al. Cell Tissue Res (2016) 366: 101. <a href="https://doi.org/10.1007/s00441-016-2403-0">https://doi.org/10.1007/s00441-016-2403-0</a></p> | ||
+ | </div> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div class="ec--h3">Composite parts</div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804001"><div class="ec--h4">BBa_K2804001 | ||
+ | </div></a> | ||
+ | CBD cipA fused to BMP2 under the control of LacI promoter | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p">Therapeutic protein coupled to the CBD whose expression is regulated by the presence of IPTG in the medium.</div> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804004"><div class="ec--h4">BBa_K2804004 | ||
+ | </div></a> | ||
+ | CBD cipA fused to sfGFP | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804005"><div class="ec--h4">BBa_K2804005 | ||
+ | </div></a> | ||
+ | CBD cipA fused to sfGFP under the control of LacI promoter | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804014"><div class="ec--h4">BBa_K2804014 | ||
+ | </div></a> | ||
+ | CBD cipA fused to sfGFP | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804015"><div class="ec--h4">BBa_K2804015 | ||
+ | </div></a> | ||
+ | CBD cipA fused to BMP2 | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
</div> | </div> | ||
− | </ | + | <table border="0" cellspacing="0" cellpadding="0" width="703"> |
− | + | <tr> | |
− | + | <td width="175" nowrap valign="bottom"><p><strong>Name</strong></p></td> | |
− | </div> | + | <td width="448" nowrap valign="bottom"><p><strong>Description</strong></p></td> |
− | + | <td width="80" nowrap valign="bottom"><p><strong>Type</strong></p></td> | |
− | + | </tr> | |
− | <div class="ec-- | + | <tr> |
− | + | <td width="175"><p>BBa_K2804000</p></td> | |
+ | <td width="448" nowrap valign="bottom"><p><strong>CBD cipA with a C-terminal linker</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804001</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p>CBD cipA fused to BMP2 under the control of LacI promoter</p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804002</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>Bone morphogenetic protein 2 (BMP2)</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804004</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>CBD cipA fused to sfGFP</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804005</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>CBD cipA fused to sfGFP under the control of LacI promoter</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804006</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>Superfolder GFP with six-histidine tail</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804014</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>CBD cipA fused to sfGFP</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804015</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>CBD cipA fused to BMP2</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | <p> </p> | ||
+ | |||
+ | <a name="ELA"><div class="ec--h2">Fusion protein to provide elasticity to the biomaterial</div></a> | ||
+ | <div class="ec--h3">Coding parts</div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804011"><div class="ec--h4">BBa_K2804011 | ||
+ | </div></a> | ||
+ | ELP V-150 | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804012"><div class="ec--h4">BBa_K2804012 | ||
+ | </div></a> | ||
+ | ELP V-150 | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div class="ec--h3">Composite part</div> | ||
+ | |||
+ | <div class="ec--BMP--container"> | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2804013"><div class="ec--h4">BBa_K2804013 | ||
+ | </div></a> | ||
+ | CBD cipA fused to ELP_C5 under the control of LacI promoter | ||
+ | <div class="ec--BMP--text"> | ||
+ | <div class="ec--p"></div> | ||
+ | </div> | ||
</div> | </div> | ||
− | + | <table border="0" cellspacing="0" cellpadding="0" width="703"> | |
− | + | <tr> | |
− | + | <td width="175" nowrap valign="bottom"><p><strong>Name</strong></p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>Description</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p><strong>Type</strong></p></td> | |
− | + | </tr> | |
− | + | <tr> | |
− | + | <td width="175"><p>BBa_K2804011</p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>ELP V-150</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | |
− | + | </tr> | |
− | + | <tr> | |
− | + | <td width="175"><p>BBa_K2804012</p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>ELP_C5</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | |
− | + | </tr> | |
− | + | <tr> | |
− | + | <td width="175"><p>BBa_K2804013</p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>CBD cipA fused to ELP_C5 under the control of LacI promoter</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | |
− | + | </tr> | |
− | + | </table> | |
− | + | <p> </p> | |
− | + | ||
− | + | <a name="CELL"><div class="ec--h2">Cellulose production module</div></a> | |
− | + | <div class="ec--h3">Coding parts</div> | |
− | + | ||
− | + | <div class="ec--BMP--container"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K2804008"> | |
− | + | <div class="ec--h4"> | |
− | + | BBa_K2804008 | |
− | + | </div> | |
− | + | </a> | |
− | + | CmcAx: Endo-beta-1,4-glucanase ezyme | |
− | + | <div class="ec--BMP--text"> | |
− | + | <div class="ec--p"></div> | |
− | + | </div> | |
− | + | </div> | |
− | + | <div class="ec--BMP--container"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K2804009"><div class="ec--h4">BBa_K2804009 | |
− | + | </div></a> | |
− | + | CcpAx: Cellulose-complementing protein | |
− | + | <div class="ec--BMP--text"> | |
− | + | <div class="ec--p"></div> | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
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</div> | </div> | ||
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</div> | </div> | ||
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</div> | </div> | ||
− | + | ||
− | + | <div class="ec--h3">Composite part</div> | |
− | + | ||
− | + | <div class="ec--BMP--container"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K2804010"><div class="ec--h4">BBa_K2804010 | |
− | + | </div></a> | |
− | + | Operon member of bacterial cellulose synthase complex: Cmcax and CcpAx | |
− | + | <div class="ec--BMP--text"> | |
− | + | <div class="ec--p"></div> | |
− | + | </div> | |
− | + | </div> | |
− | + | <table border="1" cellspacing="0" cellpadding="0" width="703"> | |
− | + | <tr> | |
− | + | <td width="175" nowrap valign="bottom"><p><strong>Name</strong></p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>Description</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p><strong>Type</strong></p></td> | |
− | + | </tr> | |
− | + | <tr> | |
− | + | <td width="175"><p>BBa_K2804008</p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>CmcAx: Endo-beta-1,4-glucanase ezyme</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | |
− | + | </tr> | |
− | + | <tr> | |
− | + | <td width="175"><p>BBa_K2804009</p></td> | |
− | + | <td width="448" nowrap valign="bottom"><p><strong>CcpAx: Cellulose-complementing protein</strong></p></td> | |
− | + | <td width="80" nowrap valign="bottom"><p>Coding</p></td> | |
− | + | </tr> | |
+ | <tr> | ||
+ | <td width="175"><p>BBa_K2804010</p></td> | ||
+ | <td width="448" nowrap valign="bottom"><p><strong>Operon member of bacterial cellulose synthase complex: Cmcax and CcpAx</strong></p></td> | ||
+ | <td width="80" nowrap valign="bottom"><p>Composite</p></td> | ||
+ | </tr> | ||
+ | </table> | ||
</div> | </div> | ||
</div> | </div> | ||
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{{Ecuador/footer}} | {{Ecuador/footer}} |
Revision as of 00:39, 18 October 2018
Bone morphogenetic protein 2 (BMP2), is a member of the transforming growth factor-β (TGF-β) super-family. It is involved in chondrogenesis and osteogenesis in vitro via the expression induction of Sox9, Runx2 and its downstream markers (Zhou et al., 2016).
Zhou, N., Li, Q., Lin, X. et al. Cell Tissue Res (2016) 366: 101. https://doi.org/10.1007/s00441-016-2403-0
Name |
Description |
Type |
BBa_K2804000 |
CBD cipA with a C-terminal linker |
Coding |
BBa_K2804001 |
CBD cipA fused to BMP2 under the control of LacI promoter |
Composite |
BBa_K2804002 |
Bone morphogenetic protein 2 (BMP2) |
Coding |
BBa_K2804004 |
CBD cipA fused to sfGFP |
Composite |
BBa_K2804005 |
CBD cipA fused to sfGFP under the control of LacI promoter |
Composite |
BBa_K2804006 |
Superfolder GFP with six-histidine tail |
Coding |
BBa_K2804014 |
CBD cipA fused to sfGFP |
Composite |
BBa_K2804015 |
CBD cipA fused to BMP2 |
Composite |
<div class="ec--h2">Fusion protein to provide elasticity to the biomaterial</div>
Name |
Description |
Type |
BBa_K2804011 |
ELP V-150 |
Coding |
BBa_K2804012 |
ELP_C5 |
Coding |
BBa_K2804013 |
CBD cipA fused to ELP_C5 under the control of LacI promoter |
Composite |
<div class="ec--h2">Cellulose production module</div>
Name |
Description |
Type |
BBa_K2804008 |
CmcAx: Endo-beta-1,4-glucanase ezyme |
Coding |
BBa_K2804009 |
CcpAx: Cellulose-complementing protein |
Coding |
BBa_K2804010 |
Operon member of bacterial cellulose synthase complex: Cmcax and CcpAx |
Composite |