Nicolebennis (Talk | contribs) |
Nicolebennis (Talk | contribs) |
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<td>TAATACGACTCACTATAGGACAGCCCGTCGTGATATTCTGTTTTAGAGCTAGAAATAGCAAGTTAAAATAAGGCTAGTCCGTTATCAACTTGAAAAAGTGGCACCGAGTCGGTGC</td> | <td>TAATACGACTCACTATAGGACAGCCCGTCGTGATATTCTGTTTTAGAGCTAGAAATAGCAAGTTAAAATAAGGCTAGTCCGTTATCAACTTGAAAAAGTGGCACCGAGTCGGTGC</td> | ||
</tr> | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_J1.1</td> | ||
+ | <td>Targeting EPO exon-exon junction 1, version 1</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>GGGTGCACGAATGTCCTGCC</td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_J1.2 </td> | ||
+ | <td>Targeting EPO exon-exon junction 1, version 2</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>ACGAATGTCCTGCCTGGCTG</td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_J2.1</td> | ||
+ | <td>Targeting EPO exon-exon junction 2, version 1</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>GGAGGCCGAGAATATCACGA</td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_J.2 </td> | ||
+ | <td>Targeting EPO exon-exon junction 2, version 2</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>ACAGCCCGTCGTGATATTCT</td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_J2.3</td> | ||
+ | <td>Targeting EPO exon-exon junction 2, version 3</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>GAGGCCGAGAATATCACGAC</td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_J3.1</td> | ||
+ | <td>Targeting EPO exon-exon junction 2, version 2</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td> CCTGGAAGAGGATGGAGGTC </td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_J3.2</td> | ||
+ | <td>Targeting EPO exon-exon junction 3, version 1</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>GAGGATGGAGGTCGGGCAGC</td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_J3.1</td> | ||
+ | <td>Targeting EPO exon-exon junction 3, version 2</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td> CCTGGAAGAGGATGGAGGTC </td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_J4.1</td> | ||
+ | <td>Targeting EPO exon-exon junction 4, version 1</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>AGGGGAGATGGCTTCCTTCT </td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_J4.2</td> | ||
+ | <td>Targeting EPO exon-exon junction 4, version 2</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td>TCGGGCTCTGGGAGCCCAGA </td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_M1</td> | ||
+ | <td>Targeting EPO exon-exon junction 2 with 4 mismatches</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td></td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_M2</td> | ||
+ | <td>Targeting EPO exon-exon junction 2 with 7 mismatches</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td> GCACCCGGTGGTAATGTTTT </td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_M3</td> | ||
+ | <td>Targeting EPO exon-exon junction 2 with 3 mismatches</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td> GCACCCGGTCGTGATATTCT </td> | ||
+ | </tr> | ||
+ | <tr class="tableevengrnbl"> | ||
+ | <td>EPO_M4</td> | ||
+ | <td>Targeting EPO exon-exon junction 2 with 3 mismatches</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td> ACAGCCCGTCGTAATGTTTT </td> | ||
+ | </tr> | ||
+ | <tr class="tableunevengrnbl"> | ||
+ | <td>EPO_M5</td> | ||
+ | <td>Targeting EPO exon-exon junction 2 with 3 mismatches</td> | ||
+ | <td>Fusion Protein</td> | ||
+ | <td> GCAGCCCGTGGTGATATTTT </td> | ||
+ | </tr> | ||
</table> | </table> | ||
Revision as of 02:09, 18 October 2018
Primers
ID | Name | Module | Sequence (5' to 3') |
---|---|---|---|
001 | fw_dxCas9 | Fusion Protein | atataGCGGCCGCtatggacaagaagtactccat |
002 | rv_dxCas9 | Fusion Protein | tatGGTACCttatGGCCGGCCcaccttcctcttcttcttgg |
003 | fw_dxCas9_mut_EcoRI | Fusion Protein | P-gcgaattttccaaaagagtgatcc |
004 | rv_dxCas9_mut_EcoRI | Fusion Protein | P-ttatttgctcgatgatctcatcaagg |
005 | fw_Tn5_afterC | Fusion Protein | tataGGCCGGCCtAAACTGGGCGGCGGCGCGCCGGCGGTGGGCGGCGGCCCGAAAGCGGCGGATAAAatgattaccagtgcactgcatc |
006 | rv_Tn5_afterC | Fusion Protein | tataGGTACCttagattttaatgccctgcgcca |
007 | fw_Tn5_beforeC | Fusion Protein | tataGAATTCtatgattaccagtgcactgcatc |
008 | rv_Tn5_beforeC | Fusion Protein | tataGCGGCCGCTTTATCCGCCGCTTTCGGGCCGCCGCCCACCGCCGGCGCGCCGCCGCCCAGTTTgattttaatgccctgcgcca |
009 | rv_dxCas9_mut1_GA | Fusion Protein | cattactaaagatctcttgcaggtagca |
010 | fw_dxCas9_mut1_GA | Fusion Protein | gctacctgcaagagatctttagtaatg |
011 | rv_dxCas9_mut2_GA | Fusion Protein | gaccttaacggtttgcagtattcc |
012 | fw_dxCas9_mut2_GA | Fusion Protein | ggaatactgcaaaccgttaagg |
013 | rv_dxCas9_mut3_GA | Fusion Protein | ccgttttgcaggtagtacag |
014 | fw_dxCas9_mut3_GA | Fusion Protein | ctgtactacctgcaaaacgg |
015 | rv_dxCas9_mut4_GA | Fusion Protein | tcgttacctttttgcagcac |
016 | fw_dxCas9_mut4_GA | Fusion Protein | tgctgcaaaaaggtaacgag |
017 | rv_dxCas9_mut5_GA | Fusion Protein | tacttgaaggctgccggc |
018 | fw_dxCas9_mut_GA | Fusion Protein | gccggcagccttcaag |
019 | fw_dxCas9_mut1_BL | Fusion Protein | P-gctacctgcaagagatctttagtaatg |
020 | rv_dxCas9_mut1_BL | Fusion Protein | P-agatccgattctttctgcgg |
021 | fw_dxCas9_mut2_BL | Fusion Protein | P-ggaatactgcaaaccgttaagg |
022 | rv_dxCas9_mut2_BL | Fusion Protein | P-ctttttgatagctgggctacct |
023 | fw_dxCas9_mut3_BL | Fusion Protein | P-ctgtactacctgcaaaacgg |
024 | rv_dxCas9_mut3_BL | Fusion Protein | P-gtagagcttctcattctgaagc |
025 | fw_dxCas9_mut4_BL | Fusion Protein | P-ctgcaaaaaggtaacgagctg |
026 | rv_dxCas9_mut4_BL | Fusion Protein | P-cacgcccgcactagc |
027 | fw_dxCas9_mut5_BL | Fusion Protein | P-gccggcagccttcaag |
028 | rv_dxCas9_mut5_BL | Fusion Protein | P-gcgcccaagttggtca |
029 | fw_T7_promoter | General | TAATACGACTCACTATAGGG |
030 | rv_T7_promoter | General | GCTAGTTATTGCTCAGCGG |
031 | VF2 | General | tgccacctgacgtctaagaa |
032 | VR | General | attaccgcctttgagtgagc |
033 | fw_sgRNA_1 | Fusion Protein | aagcTAATACGACTCACTATAGGGGAGGCCGAGAATATCA |
034 | rv_sgRNA_1 | Fusion Protein | AAAAGCACCGACTCGGTGCCACTT |
035 | fw_sgRNA_2 | Fusion Protein | aagcTAATACGACTCACTATAGGACAGCCCGTCGTGATATTCTGTTTTAGAGCTAGAAATAG |
036 | fw_adTn5_1 | Fusion Protein | CTAGCTGTCTCTTATACACATCTATTGGCGAAATGGATGAACTGTTTACCATGC |
037 | rv_adTn5_1 | Fusion Protein | GCATGGTAAACAGTTCATCCATTTCGCCAATAGATGTGTATAAGAGACAGCTAG |
038 | fw_1_AUpart | d-AuNPs | GATCGAATTCGCGGCCGCTTC |
039 | rv_1_AUpart | d-AuNPs | CGATTCTGCAGCGGCCGCTAC |
040 | fw_2_AUpart | d-AuNPs | GGAGGCCGAGAATATCACGA |
041 | rv_2_AUpart | d-AuNPs | TTGAGATCGTTTTGGTCTGC |
042 | fw_3_AUpart | d-AuNPs | CAGGTCGACAAGCTTGCG |
043 | fw_dCas9 | Fusion Protein | atataGCGGCCGCtatggataagaaatactcaataggcttagc |
044 | rv_dCas9 | Fusion Protein | tatGGTACCttatGGCCGGCCgtcacctcctagctgactc |
045 | fw_1_Tn5-L-dxCas9_Gblock | Fusion Protein | ACCATGGGCAGCAGC |
046 | rv_1_Tn5-L-dxCas9_Gblock | Fusion Protein | GTAGGGTATCCGAAATGTGAGGATTTTC |
047 | fw_2_Tn5-L-dxCas9_Gblock | Fusion Protein | GGGAAAAGATTGAGAAAATCCTCACATTTCG |
048 | rv_2_Tn5-L-dxCas9_Gblock | Fusion Protein | TGGCGTTCAAATTTCGCAGC |
049 | fw_pACYC-Duet_Backbone | Fusion Protein | GGTACCCTCGAGTCTGG |
050 | rv_pACYC-Duet_Backbone | Fusion Protein | GAATTCGGATCCTGGCTG |
051 | fw_BB_pSB1C3 | BioBrick | TACTAGTAGCGGCCGCTGC |
052 | rv_BB_pSB1C3 | BioBrick | CTAGAAGCGGCCGCGA |
053 | rv_BB_pSB1C3_extraNuc | BioBrick | CTCTAGAAGCGGCCGCGA |
054 | fw_BB_Tn5 | BioBrick | GCTAAGGATGATTTCTGGAATTCGCGGCCGCTTCTAGatgattaccagtgcactgcatcg |
055 | rv_BB_Tn5 | BioBrick | CCTTTTTTGCCGGACTGCAGCGGCCGCTACTAGTAttagattttaatgccctgcgccatc |
056 | fw_BB_dxCas9 | BioBrick | GCTAAGGATGATTTCTGGAATTCGCGGCCGCTTCTAGatggacaagaagtactccattgg |
057 | rv_BB_dxCas9 | BioBrick | CTTGCCCTTTTTTGCCGGACTGCAGCGGCCGCTACTAGTAttatggccggcccac |
058 | fw_BB_Linker | BioBrick | CGCTAAGGATGATTTCTGGAATTCGCGGCCGCTTCTAGAGGGCCGGCCtAAACTGG |
059 | rv_BB_Linker | BioBrick | CTTTTTTGCCGGACTGCAGCGGCCGCTACTAGTATTTATCCGCCGCTTTCGGGCCGCCGC |
060 | fw_BB_T7p | BioBrick | ATGATTTCTGGAATTCGCGGCCGCTTCTAGAGTAATACGACTCACTATAGGGGAATTGTG |
061 | rv_BB_T7p | BioBrick | TTGCCCTTTTTTGCCGGACTGCAGCGGCCGCTACTAGTAGCTAGTTATTGCTCAGCGGTG |
062 | fw_adTn5_2 | Fusion Protein | CTGTCTCTTATACACATCTATTGGCGAAATGGATGAACTGTTTACCATGC |
063 | rv_adTn5_2 | Fusion Protein | GCATGGTAAACAGTTCATCCATTTCGCCAATAGATGTGTATAAGAGACAG |
064 | rv_adTn5_label | Fusion Protein | Cy-GCATGGTAAACAGTTCATCCATTTCGCCAATAGATGTGTATAAGAGACAG |
065 | fw_1_AUpart | d-AuNPs | Cy-GATCGAATTCGCGGCCGCTTC |
066 | fw_bovine_albumin | Sample Preparation | TTGTTTCAACTCAAACAGCCTT |
067 | rv_bovine_albumin | Sample Preparation | AGAATCCCCATGGACAGAGA |
068 | fw_vectorxcas_spike | Sample Preparation | AGTAGCGGCCGCTGCAGaaggaagaggctgcaatctgtggc |
069 | rv_vectorxcas_spike | Sample Preparation | AGAAGCGGCCGCGAATTCcacacaagcagggagcagatactgg |
070 | fw_epo_spike | Sample Preparation | tgctccctgcttgtgtgGAATTCGCGGCCGCTTCT |
071 | rv_epo_spike | Sample Preparation | gattgcagcctcttccttCTGCAGCGGCCGCTAC |
072 | fw_epo_frag | Sample Preparation | GCCTCCCAGTCCTGGGCG |
073 | rv_epo_frag | Sample Preparation | GCAGTTGCAGGGGCTCCCAC |
074 | fw_epo_check | Sample Preparation | CCTGGAGAGGTACCTCTTGGAGGC |
075 | rv_epo_check | Sample Preparation | GCCCGACCTCCATCCTCTTCCAG |
076 | rv_adKan150 | Fusion Protein | catcctatggaactgcctcggtgagttttctccttc |
077 | rv_adKan300 | Fusion Protein | gaaatgcataagcttttgccattctcaccggattc |
078 | rv_adKan800 | Fusion Protein | gagccatattcaacgggaaacgtcttgctcc |
079 | fw_3_dxCas9-L-Tn5_Gblock | Fusion Protein | agaaataattttgtttaactttaataaggagatataccatgggc |
080 | rv_3_dxCas9-L-Tn5_Gblock | Fusion Protein | CTCGAATCAGTTTGTCATTTTCATCGTACTTG |
081 | fw_4_dxCas9-L-Tn5_Gblock | Fusion Protein | CCCAAATTCTCGATTCACGCATG |
082 | rv_4_dxCas9-L-Tn5_Gblock | Fusion Protein | tttagaggccccaaggggttatg |
083 | fw_2pACYC-Duet_Backbone | Fusion Protein | CTGCTGCCACCGCTG |
084 | rv_2pACYC-Duet_Backbone | Fusion Protein | GCTGCTGCCCATGGTATATC |
085 | fw_gblock1_mut_EcoRI | Fusion Protein | CAGGATCCGAATACTATGATTACC |
086 | rv_gblock1_mut_EcoRI | Fusion Protein | GGTAATCATAGTATTCGGATCCTG |
087 | fw_adTn5_Phos | Fusion Protein | P-CTGTCTCTTATACACATCT |
088 | fw_1_Tn5-dxCas9_Gblock_option2 | Fusion Protein | accatgggcagcagccatcaccatcatcaccacagcc |
089 | rv_1_Tn5-dxCas9_Gblock_option2 | Fusion Protein | cagggaaaagattgagaaaatcctcacatttcggataccctac |
090 | rv_BB_dxCas9_2 | BioBrick | CTGCAGCGGCCGCTACTAGTAttatGGCCGGCCcaccttcctcttcttcttg |
091 | fw_big_bovine_alb | Sample Preparation | CCCCCGTATCTGTCATTTCTTT |
092 | rv_big_bovine_alb | Sample Preparation | GGCATGGCAACCCACTGC |
093 | fw_dxcas_BL_bb | BioBrick | P-TACTAGTAGCGGCCGCTGCAGTCCGG |
094 | rv_dxcas_BL_bb | BioBrick | P-ttacaccttcctcttcttcttggggtcagccct |
095 | EPO-2 | d-AuNPs | TCCTGTCCCTGCTGTCGCTC |
096 | EPO-3 | d-AuNPs | GCCTGGAAGAGGATGGAGGT |
097 | EPO-4 | d-AuNPs | CTGCATGTGGATAAAGCCGT |
098 | EPO-5 | d-AuNPs | CGAACAATCACTGCTGACAC |
099 | fw_BB_sgRNA_EPO1 | BioBrick | gaattcgcggccgcttctagagGGAGGCCGAGAATATCAC |
100 | fw_BB_sgRNA_EPO2 | BioBrick | gaattcgcggccgcttctagagACAGCCCGTCGTGATATTCT |
101 | fw_BB_T7_sgRNA | BioBrick | gaattcgcggccgcttctagagaagcTAATACGACTCACTATAGG |
102 | rv_BB_sgRNA | BioBrick | ctgcagcggccgctactagtaGCACCGACTCGGTGCCAC |
103 | SeqTim_01 | Sequencing | GATATGAATAAATTGCAGTTTGTCGGGCAGCAGGCCGTAGA |
104 | SeqTim_02 | Sequencing | CATCATTGGCAACGCTACCCTCCATCCTCTTCCAGGCAT |
105 | SeqTim_03 | Sequencing | TCTACGGCCTGCTGCCCGACAAACTGCAATTTATTCATATC |
106 | SeqTim_04 | Sequencing | ATGCCTGGAAGAGGATGGAGGGTAGCGTTGCCAATGATG |
107 | SeqTim_05 | Sequencing | TTCGGGCTCTGGGAGCCCAGccgcctccatccagtctatt |
108 | SeqTim_06 | Sequencing | GGAGGGGAGATGGCTTCCTTgaatgaagccataccaaacg |
109 | SeqTim_07 | Sequencing | cgtttggtatggcttcattcAAGGAAGCCATCTCCCCTCC |
110 | SeqTim_08 | Sequencing | aatagactggatggaggcggCTGGGCTCCCAGAGCCCGAA |
111 | SeqTim_10 | Sequencing | P-CTGTCTCTTATACACATCTATGCGCTTCGAA |
112 | SeqTim_11 | Sequencing | AGCTTCGCGTATCTACACATATTCTCTGTC |
113 | SeqTim_12 | Sequencing | P-AGCTTCGCGTATCTACACATATTCTCTGTC |
IV001 | fw_IV1 | In Vivo | CCCTGAACCGACGACCGG |
IV002 | rv_IV1 | In Vivo | GCAGTGTGACCGTGTGCTTC |
IV003 | fw_IV2 | In Vivo | CTGAAACCTCAGGCATTTGAGAAGC |
IV004 | rv_IV2 | In Vivo | GAAATTCGAAAGCAAATTCGACCCGG |
IV005 | fw_KanR | In Vivo | CTAGCTGTCTCTTATACACATCTTTAGAAAAACTCATCGAGCATCAAATG |
IV006 | rv_KanR | In Vivo | GACTCTGTCTCTTATACACATCTATGAGCCATATTCAACGGG |
IV007 | fw_diagnostic | In Vivo | CCGGTAATAATCCACAGCAG |
IV008 | rv_diagnostic | In Vivo | CCAGATTCAGACAGCCAATC |
IV009 | fw_KanRCassetteME | In Vivo | CTAGCTGTCTCTTATACACATCTTAAcTAAcTAAcagctcgagtcccgtcaag |
IV010 | rv_KanRCassetteME | In Vivo | CTAGCTGTCTCTTATACACATCTTAAcTAAcTAAcaaagccacgttgtgtctc |
IV011 | fw_KanRCassette | In Vivo | TAAcTAAcTAAcagctcgagtcccgtc |
IV012 | rv_KanRCassette | In Vivo | TAAcTAAcTAAcaaagccacgttgtgtctc |
IV013 | fw_KanRCassetteME | In Vivo | cttggaCTGTCTCTTATACACATCTgacagctcgagtcccgtc |
IV014 | rv_KanRCassetteME | In Vivo | tgtcatCTGTCTCTTATACACATCTattcaacaaagccacgttgtgtctc |
IV015 | fw_KanRCassette | In Vivo | ctgacagctcgagtcccgtc |
IV016 | rv_KanRCassette | In Vivo | attcaacaaagccacgttgtgtctc |
IV017 | fw_KanRMEBiobrick | BioBrick | gaattcgcggccgcttctagagcttggaCTGTCTCTTATACACATCTgacag |
IV018 | rv_KanRMEBiobrick | BioBrick | tactagtagcggccgctgcagtgtcatCTGTCTCTTATACACATCTattcaacaaagc |
IV019 | rv_KanR internal | BioBrick | gcagtttcatttgatgctcgatgag |
IV020 | fw_KanR internal | BioBrick | ggctcataacaccccttgtattactg |
IV021 | fw target seq LacZ | In Vivo | TCGCACAGCGTGTACCACAG |
IV022 | rv target seq LacZ | In Vivo | CTGTGGTACACGCTGTGCG |
IV023 | fw_pSB1C3ori | BioBrick | GCAAGCAGCAGATTACGCG |
ssDNAp
ID | Name | Module | Sequence (5' to 3') |
---|---|---|---|
001 | ssDNAp EPO 1 | dAuNPs | GGAGGCCGAGAATATCACGA |
002 | ssDNAp EPO 2 | dAuNPs | TCCTGTCCCTGCTGTCGCTC |
003 | ssDNAp EPO 3 | dAuNPs | GCCTGGAAGAGGATGGAGGT |
004 | ssDNAp EPO 4 | dAuNPs | CTGCATGTGGATAAAGCCGT |
005 | ssDNAp EPO 5 | dAuNPs | CGAACAATCACTGCTGACAC |
sgRNA
ID | Name | Module | Sequence (5' to 3') |
---|---|---|---|
001 | sgRNA EPO 1 | Fusion Protein | aagcTAATACGACTCACTATAGGGGAGGCCGAGAATATCACGAGTTTTAGAGCTAGAAATAGCAAGTTAAAATAAGGCTAGTCCGTTATCAACTTGAAAAAGTGGCACCGAGTCGGTGCTTTT |
002 | sgRNA EPO 2 | Fusion Protein | TAATACGACTCACTATAGGACAGCCCGTCGTGATATTCTGTTTTAGAGCTAGAAATAGCAAGTTAAAATAAGGCTAGTCCGTTATCAACTTGAAAAAGTGGCACCGAGTCGGTGC |
EPO_J1.1 | Targeting EPO exon-exon junction 1, version 1 | Fusion Protein | GGGTGCACGAATGTCCTGCC |
EPO_J1.2 | Targeting EPO exon-exon junction 1, version 2 | Fusion Protein | ACGAATGTCCTGCCTGGCTG |
EPO_J2.1 | Targeting EPO exon-exon junction 2, version 1 | Fusion Protein | GGAGGCCGAGAATATCACGA |
EPO_J.2 | Targeting EPO exon-exon junction 2, version 2 | Fusion Protein | ACAGCCCGTCGTGATATTCT |
EPO_J2.3 | Targeting EPO exon-exon junction 2, version 3 | Fusion Protein | GAGGCCGAGAATATCACGAC |
EPO_J3.1 | Targeting EPO exon-exon junction 2, version 2 | Fusion Protein | CCTGGAAGAGGATGGAGGTC |
EPO_J3.2 | Targeting EPO exon-exon junction 3, version 1 | Fusion Protein | GAGGATGGAGGTCGGGCAGC |
EPO_J3.1 | Targeting EPO exon-exon junction 3, version 2 | Fusion Protein | CCTGGAAGAGGATGGAGGTC |
EPO_J4.1 | Targeting EPO exon-exon junction 4, version 1 | Fusion Protein | AGGGGAGATGGCTTCCTTCT |
EPO_J4.2 | Targeting EPO exon-exon junction 4, version 2 | Fusion Protein | TCGGGCTCTGGGAGCCCAGA |
EPO_M1 | Targeting EPO exon-exon junction 2 with 4 mismatches | Fusion Protein | |
EPO_M2 | Targeting EPO exon-exon junction 2 with 7 mismatches | Fusion Protein | GCACCCGGTGGTAATGTTTT |
EPO_M3 | Targeting EPO exon-exon junction 2 with 3 mismatches | Fusion Protein | GCACCCGGTCGTGATATTCT |
EPO_M4 | Targeting EPO exon-exon junction 2 with 3 mismatches | Fusion Protein | ACAGCCCGTCGTAATGTTTT |
EPO_M5 | Targeting EPO exon-exon junction 2 with 3 mismatches | Fusion Protein | GCAGCCCGTGGTGATATTTT |
Adapters
ID | Name | Module | Sequence (dsDNA) |
---|---|---|---|
036 037 |
Adapter DNA short 1 | Fusion Protein | CTAGCTGTCTCTTATACACATCTATTGGCGAAATGGATGAACTGTTTACCATGC GATCGACAGAGAATATGTGTAGATAACCGCTTTACCTACTTGACAAATGGTACG |
062 063 |
Adapter DNA short 2 | Fusion Protein | CTGTCTCTTATACACATCTATTGGCGAAATGGATGAACTGTTTACCATGC GACAGAGAATATGTGTAGATAACCGCTTTACCTACTTGACAAATGGTACG |
087 063 |
Adapter DNA labelled | Fusion Protein | P-CTGTCTCTTATACACATCT GACAGAGAATATGTGTAGATAACCGCTTTACCTACTTGACAAATGGTACG |
111 112 |
Adapter Sequencing | Sequencing | P-CTGTCTCTTATACACATCTATGCGCTTCGAA GACAGAGAATATGTGTAGATACGCGAAGCT |
111 113 |
Adapter Sequencing | Sequencing | P-CTGTCTCTTATACACATCTATGCGCTTCGAA GACAGAGAATATGTGTAGATACGCGAAGCT-P |