Difference between revisions of "Team:SJTU-BioX-Shanghai/HP test page"

Line 16: Line 16:
 
li{margin-bottom:0;}
 
li{margin-bottom:0;}
 
</style>
 
</style>
 +
 +
 +
<html>
 +
 +
<head>
 +
<meta http-equiv="refresh" content="1800;URL='pigeondone.html'">
 +
</head>
 +
 +
<body bgcolor="#ffffff">
 +
 +
<script type="text/javascript">
 +
 +
  var _gaq = _gaq || [];
 +
  _gaq.push(['_setAccount', 'UA-40053177-1']);
 +
  _gaq.push(['_trackPageview']);
 +
 +
  (function() {
 +
    var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
 +
    ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
 +
    var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
 +
  })();
 +
 +
</script>
 +
 +
<font face = "Arial">
 +
<center>
 +
<hr width=25%>
 +
<img src=sbolpicgen.png width=475>
 +
<h1>
 +
    Pigeon
 +
</h1>
 +
<h3>
 +
Design Visualizer for Synthetic Biology
 +
</h3>
 +
<hr width=25%>
 +
</center>
 +
 +
<center>
 +
<table width=900>
 +
<tr><td>
 +
Syntax:
 +
 +
 +
A list of
 +
<em>type [name] [color] [nl]</em>
 +
 +
where <em>type</em> is one of <em>p, P, c, r, t, T, s, o, >, <, | or - </em>;
 +
 +
a blank line;
 +
 +
followed by
 +
 +
<em> name ind | rep name</em>
 +
 +
There are 14 colors labeled 1 to 14. These appear as the third item in each line.
 +
Even numbers are darker versions of the odd numbered colors in the following order of hues: blue, green, red, orange,
 +
purple, yellow, and black.
 +
 +
 +
An ``nl'' as a fourth item removes the label for that element.
 +
 +
Characters < and > before p and c give inverse p and c.
 +
 +
<br>
 +
<h3>
 +
Color codes:
 +
</h3>
 +
<center>
 +
<img src=colorcode.png width=600>
 +
</center>
 +
<br>
 +
<h3>
 +
Glyph codes:
 +
</h3>
 +
<center>
 +
<img src=pigeonlist.png width=1300>
 +
</center>
 +
 +
<br>
 +
<br>
 +
 +
<center>
 +
 +
<p>
 +
<b>TIP: You can access Pigeon via Perl using <a href = pigget.txt target = blank>pigget.pl</a>.</b>
 +
</p>
 +
 +
<p>
 +
<b>TIP: <font color="#aa0000">You can provide feedback on Pigeon through the Pigeon Forum <a href=feedback.html target=blank>here</a>.</font></b>
 +
</p>
 +
 +
<p>
 +
<b>TIP: You can find Pigeon examples <a href=pigeonHelp.html target=blank>here</a>.</b>
 +
</p>
 +
<p>
 +
<b>TIP: You can read about Pigeon  <a href=http://pubs.acs.org/doi/abs/10.1021/sb400024s target=blank>here</a>.</b>
 +
</p>
 +
 +
<p>
 +
<b>TIP: <font color="#00cc00"> Try out the new Pigeon GUI <a href=http://pigeon.synbiotools.org target=blank>here</a>.</font></b>
 +
</p>
 +
 +
<br>
 +
<br>
 +
 +
    <p>You are connecting from 137.122.64.159:37698.</p>
 +
 +
<form action = "pigeon.php" method = "post" >
 +
 +
    <p>
 +
        <textarea name = "desc" rows=10 cols=75/>
 +
o A 1
 +
<t t
 +
<c c2 2
 +
<r r1 1
 +
<p p1 6
 +
s spacer 9
 +
p p2 2
 +
r r2 5
 +
c c1 6
 +
t t
 +
o B 1
 +
z ori 1
 +
? Amp 1
 +
v KanR 1
 +
# Arcs
 +
c1 rep p1
 +
c2 rep p2
 +
y rep c1-p1
 +
x rep c2-p2
 +
</textarea>
 +
 +
    <p>
 +
        <!-Top arcs only: <input type = "checkbox" checked = "Checked" name = "topOnly" value = "Yes"/>
 +
       
 +
        <input type = "submit" value = "Pigeon!"/>
 +
    </p>
 +
 +
</form>
 +
<td><tr>
 +
</table>
 +
</center>
 +
 +
<center>
 +
<a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/3.0/"><img alt="Creative Commons License" style="border-width:0" src="http://i.creativecommons.org/l/by-nc-sa/3.0/88x31.png" /></a><br />This work is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/3.0/">Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License</a>.
 +
</center>
 +
 +
 +
<!-- Start of StatCounter Code for Default Guide -->
 +
<!-- Default Statcounter code for Synbiotools.org
 +
http://synbiotools.org -->
 +
<script type="text/javascript">
 +
var sc_project=10903722;
 +
var sc_invisible=0;
 +
var sc_security="6fd33081";
 +
var scJsHost = (("https:" == document.location.protocol) ?
 +
"https://secure." : "http://www.");
 +
document.write("<sc"+"ript type='text/javascript' src='" +
 +
scJsHost+
 +
"statcounter.com/counter/counter.js'></"+"script>");
 +
</script>
 +
<noscript><div class="statcounter"><a title="Web Analytics"
 +
href="http://statcounter.com/" target="_blank"><img
 +
class="statcounter"
 +
src="//c.statcounter.com/10903722/0/6fd33081/0/" alt="Web
 +
Analytics"></a></div></noscript>
 +
<!-- End of Statcounter Code -->
 +
<a
 +
href="http://statcounter.com/p10903722/?guest=1">stats</a>
 +
</body>
 +
 +
 +
</html>
  
  
  
 
</html>
 
</html>

Revision as of 21:44, 13 August 2018


Pigeon

Design Visualizer for Synthetic Biology


Syntax: A list of type [name] [color] [nl] where type is one of p, P, c, r, t, T, s, o, >, <, | or - ; a blank line; followed by name ind | rep name There are 14 colors labeled 1 to 14. These appear as the third item in each line. Even numbers are darker versions of the odd numbered colors in the following order of hues: blue, green, red, orange, purple, yellow, and black. An ``nl'' as a fourth item removes the label for that element. Characters < and > before p and c give inverse p and c.

Color codes:


Glyph codes:



TIP: You can access Pigeon via Perl using pigget.pl.

TIP: You can provide feedback on Pigeon through the Pigeon Forum here.

TIP: You can find Pigeon examples here.

TIP: You can read about Pigeon here.

TIP: Try out the new Pigeon GUI here.



You are connecting from 137.122.64.159:37698.

Creative Commons License
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License.
stats


</html>