Difference between revisions of "Team:Utrecht/Parts"

Revision as of 11:33, 9 October 2018

Several biobricks from the distribution kit were used during our project. These were retrieved from the kit using the protocols provided by iGEM, transformed into E. coli and isolated in elution buffer NE. We also ordered several constructs from IDT (Table 1). These Biobricks were used to create several new biobricks that were relevant to our project. BBa_K2736000 and BBa_K2736001, were created to be used as BRET pair to measure the activity of our customized Tar receptors (BBa_K2736003, BBa_K2736004, and BBa_K2736005). To test whether it was possible to switch ligand binding domains of the Tar receptor and two component receptors we created BBa_K2736002, and BBa_K2736006.

Table 1: Used Biobricks
Name	Biobrick Number	Size	Size	Obtained
RFP	BBa_K516032	828	Red fluorescence	isolated
Promoter	BBa_K608003	56	Strong promoter with medium ribosome binding site	isolated
eYFP	BBa_I15017	724	Yellow fluorescence	isolated
CheZ	BBa_K629003	645	"cheZ chemotaxis regulator protein phosphatase for CheY"	isolated
Copper promoter	98	Promoter responsive to phosphorylated CusR	ordered
Custom receptor	BBa_K2736006	1505	Fusion protein of CusS with the Tar ligand binding domain	ordered
1/5A::CheZ::Rluc	BBa_K2736002	1655	CheZ fused to Rluc	ordered
CheY	390	Chemotaxis response regulator protein	ordered

Created Biobricks

Here comes Table 2

@@ Line 31: / Line 31: @@
 <div class = "customelementM5A" id = "Introduction">
-<p>Several biobricks from the distribution kit were used during our project. These were retrieved from the kit using the protocols provided by iGEM, transformed into <i>E. coli</i>, isolated in elution buffer NE. We also ordered several constructs from IDT (Table 1). These Biobricks were used to create several new biobricks that were relevant to our project.
+<p>Several biobricks from the distribution kit were used during our project. These were retrieved from the kit using the protocols provided by iGEM, transformed into <i>E. coli</i> and isolated in elution buffer NE. We also ordered several constructs from IDT (Table 1). These Biobricks were used to create several new biobricks that were relevant to our project. BBa_K2736000 and BBa_K2736001, were created to be used as BRET pair to measure the activity of our customized Tar receptors (BBa_K2736003, BBa_K2736004, and BBa_K2736005). To test whether it was possible to
-BBa_K2736000 and BBa_K2736001, were created to be used as BRET pair to measure the activity of our customized
-Tar receptors BBa_K2736003, BBa_K2736004, and BBa_K2736005. To test whether it was possible to
 switch ligand binding domains of the Tar receptor and two component receptors we created
 BBa_K2736002, and BBa_K2736006.</p>