Difference between revisions of "Team:DTU-Denmark/Collaborations"

 
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<p style="text-align:justify" >As a team of highly motivated university students, all of us value, not only the importance of proper education, but also the opportunity to be influenced in an early age at where your dreams develop; the world is our oyster and one should feel so. Through an unanimous vote, our team decided the education branch was one we wanted to pursuit with high ambitions. Biotechnology is still a new field in education and who would be better to develop its role in our country than a team working through their summer vacation in the name of science.</p>
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<i>"Alone we can do so little; together we can do so much."</i> – Helen Keller.<br></p>
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We were lucky that a road to strong collaborations had already presented itself to us in the early phases. Due to the success of earlier DTU Biobuilders teams, we had the immense pleasure of hosting the annual  <a target="_blank" href="https://2018.igem.org/Team:DTU-Denmark/BioBrickTutorial">DTU BioBrick Tutorial</a> for the Nordic teams. We also owe our thanks to Lynn J. Rothschild approaching us with not only a project, but a chance to collaborate with the strong and competent team from <a href="https://2018.igem.org/Team:DTU-Denmark/Collaborations#collabStanford">Stanford-Brown-RISD</a>  across the world. However, we also wanted to see how far our own collaborative skills could take us and thus our combined work with the <a href="https://2018.igem.org/Team:DTU-Denmark/Collaborations#collabKU">University of Copenhagen</a> began. As the Lund team from Sweden were the successful winners of the <a href="https://2018.igem.org/Team:DTU-Denmark/Collaborations#nordicigemconf">Nordic iGEM Conference</a>  in 2017, we had the amazing opportunity of visiting Lund for this event in June together with a lot of familiar and new faces.
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<h2class="media-heading"  style="text-align: right;margin-bottom: 35px; color:#0C233F;">Science in Forum
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<h2 class="media-heading"  style="text-align: right;margin-bottom: 35px; color:#AD2D00;">The question of why we want to travel to Mars
 
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<h3 class="media-heading"  style="text-align: right;margin-bottom: 35px;">University of Copenhagen & Exeter
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<p style="text-align:center;"> <img src="https://static.igem.org/mediawiki/2018/6/69/T--DTU-Denmark--collab-ku-exeter.jpg" style="max-width: 80%;" 
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<p>Back in April, we were present at Science in Forum - an annual science festival targeted at children of all ages. Our main purpose was to peak the visitor’s interest in biotechnology and the possibilities that come with it both on a bigger scale and related to iGem. It quickly became clear, that text-packed scientific papers was a wrong angle and by changing our methods to reaching the children’s level with Jurassic World-references and DNA-strings made out of candy, we managed to communicate the purpose of our project in broad terms to a lot of interested children as well as load them up with sugar.<br>
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<p style="text-align:justify">For the Human Practices part of the project, we decided quite early on to do a collaboration with the University of Copenhagen and their iGEM team. Our universities are already tightly bound together and seeing as we both did space-related projects and were familiar with each other and our respective projects, due to having met at the <a target="_blank" href="https://2018.igem.org/Team:DTU-Denmark/BioBrickTutorial">BioBrick Tutorial</a> and later at the Nordic iGEM Conference, it made perfect sense to have our teams meet with the aim to elevate the ambitions of our respective human practices projects by joining forces. We agreed that it would be fun to explore a new side of our natural science-brains and write a report founded in the humanities. We found that this was quite unusual in previous iGEM space projects and therefore we found it relevant to question issues related to space travel in a new way. The University of Exeter had reached out to do a space-related human practices project and together, we decided to do a three-part space-related humanities report, with each university exploring the same overall issue on the basis of different fields. DTU engaged in history, <a target="_blank" href="https://2018.igem.org/Team:UCopenhagen">UCopenhagen</a> in rhetoric, and <a target="_blank" href="https://2018.igem.org/Team:Exeter">Exeter</a> in ethics.
It was great to see the vast expression of interest in all ages and it was an immense opportunity to practice creating material to the proper audience. It was clear to us, that we didn’t have a strong enough case as our project at this point and being questioned basic questions by kids and more detailed questions by adults, we got a head start with flaws and gaps we would have to seal to have a strong project.
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We knew quite early on that we wanted the report to cover the possibility of colonization on Mars. At DTU, we were intrigued to look retrospectively at the space race that lead to the moon landing and to look into the political situation at the time, in order to draw parallels to what might need to happen now to land a manned mission on Mars. The pressing matter would subsequently be what to do when we do land a mission on Mars by looking at previous colonization and imperialism and look into some of the driving factors of that era.
  
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Brainstorming was a big part of our first Skype meetings, and because of our early start, our discussions managed to shape parts of each others Human Practice projects. We continuously separated to do research and met online to discuss our findings in relation to the further development of the project. This way, we slowly found a common angle for the project which ended up being “<b>why colonize Mars</b>?”. We would structure the report so that it discussed the issues in different ways: explaining, analyzing, interpreting, and evaluating. We sorted the report in a structured manner. Firstly, exploring previous events in history and relating them to Mars colonization, then analyzing rhetorically the most cogent arguments for and against Mars colonization, and finally discussing the ethical implications of Mars colonization. We would do all of this while also determining the current measures set in place to prevent contamination on Mars, and other extraterrestrial environments.<br>
  
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<h5 align="justify"> You can read the report <a href="https://static.igem.org/mediawiki/2018/b/b9/T--DTU-Denmark--colonizing-mars.pdf" target="_blank">here.</a></h5>
  
  
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<p style="text-align:justify"> All in all, our collaboration has been a huge success, where we have gotten the opportunity to work on our projects in a completely different way, and perhaps more importantly, worked with other incredible universities and people. Thank you Frida, Victoria, and Matt!
  
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<br><br>
  
  
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As UCopenhagen got the offer to participate at Københavns Kulturnat (the biggest cultural event in Copenhagen, translates to “Copenhagen Culture Night”), they decided to extend the Danish-based part of the collaboration to include that event as well. This has enabled us to reach a large number of people to discuss our report.
  
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<h5 align="justify">Read more about Københavns Kulturnat <a href="https://2018.igem.org/Team:DTU-Denmark/Human_Practices#kulturnatten">here</a>.</h5>
  
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<h2 class="media-heading" style="text-align: left;margin-bottom: 35px; color:#D8A764;">Discussing the road to Mars</h2>
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<h3 class="media-heading"  style="text-align: left;margin-bottom: 35px;">Stanford-Brown-RISD
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<p style="text-align:justify">The supervisor of the <a target="_blank" href="https://2018.igem.org/Team:Stanford-Brown-RISD">Stanford-Brown-RISD</a> (SBR) team, Lynn J. Rothschild, approached us back in the early days of the team with a project that quickly got everyone's attention: Using the mycelium of fungi to help NASA with building a base on Mars. Her own team was also participating in this, but they decided to concentrate on providing the substrate for the fungal materials by using cyanobacteria. Therefore, we have been meeting multiple times over the course of the project, discussing in the beginning what was needed to accomplish the result and which ideas we each had. Furthermore, any problems we had and potential solutions were also brought up.
  
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<p style="text-align:center;"> <img class="imageshadow" src="https://static.igem.org/mediawiki/2018/6/6f/T--DTU-Denmark--lynn.jpg" style="max-width: 100%;" > <figcaption><p style="text-align:center; font-size:14px;"><b>Fig. 2a</b> - Lynn visited us at DTU.</p></figcaption>
  
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<h2 class="media-heading" style="text-align: left;margin-bottom: 35px; color:#50C8E8;">The Copenhagen High School Symbiotes Project</h2>
 
  
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Lynn Rothschild visited us a couple of times, where she was very helpful in guiding us through what the SBR team was doing and giving us suggestions on what we should be focusing on.
  
  
<p>It was our PhD. supervisor Kyle who got the idea to expand the iGEM participation in Denmark and include a high school team of students in the age of 16-19. There have been a growing interest in the High school track around the world (<a href="#education-figur-1">see Fig 1</a>) and Philip, from the last DTU team, Tenna and Jacob therefore set out to establish a high school team in the greater Copenhagen area to compete in iGEM; and so, the project ‘Copenhagen High School Symbiotes’, CHSS for short, was born.  
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<p id="education-figur-1" style="text-align:center;"> <img src="https://static.igem.org/mediawiki/2018/7/7e/T--DTU-Denmark--collab-standford.jpg" style="max-width: 100%;" > <figcaption><p style="text-align:center; font-size:14px;"><b>Fig. 2a</b> - The DTU team having a skype meeting with three members of the Stanford Brown team. <b>Fig. 2b</b> - Kyle standing with Lynn and three members of the Stanford team.</p></figcaption>
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<p id="education-figur-1" style="text-align:center;"> <img src="https://static.igem.org/mediawiki/2018/3/39/T--DTU-Denmark--edu-figure-1.png" style="max-width: 100%;" > <figcaption><p style="text-align:center; font-size:14px;"><b>Fig. 1: </b> - High school teams competing in iGEM(1)</p></figcaption>
 
 
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As it would be the very first high school team from Denmark to enter iGEM, a lot of regulations and rules had to be checked with the proper authorities to make sure it was feasible. With the green-light given, CHSS started to take shape.
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Both of our projects rely on the idea of using fungal bricks, and without consulting each other, we discovered that we each had been testing on which substrate to grow it on. We then agreed to send DTU grown bricks to the US, so that they could verify their results on our bricks. The delivery of bricks happened when our supervisor Kyle visited their team.
  <br><br>
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Firstly, by the suggestion of Philip, they got in contact with the non-profit organization Biotech Academy, located at DTU, to plan a collaboration with them as they would with more expertise facilitate the project. The project could be modeled after the Biosensor project, which is another collaboration between Biotech Academy and DTU Biobuilders.  
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As past and present participants of the DTU iGEM team, they could contribute with structure of the process, planning, gathering information necessary and having the needed information regarding the competition to sell it to the teachers of the different high schools. Biotech Academy, on the other hand, offered experience with teaching biotech, engaging the students and what was necessary to be allowed to work in the lab with high schoolers.  
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The importance of modeling the project was also a focus of both our teams. Both teams have created models that describe different stages of the project. Our models can be linked together to describe the whole process from growing the mycelium from a single spore to figuring out how the biomass develops, from how long it takes for a fungus to fill out a form to describe the mechanical properties of the fungus needed to design the final structure on Mars. The illustration below shows the connection between our models.
  
  
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With the forward movement of the project, they realised many more benefits of the CHSS team becoming a reality. Not only would it spark an interest in synthetic biology in high schools, which had been close to zero before, but it would also make a great chance for a collaboration with future teams from DTU and hopefully inspire more teams from Denmark.  
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The next step was getting the faculty to confirm the project as well as the necessary budget. They all spent weeks researching, corresponding through emails and having meetings with Biotech Academy and the DTU faculty to make the plans reasonable and feasible.
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However, to make sure the project stood solid when going to the faculty to get approved, and also for when sending out funding applications, they knew they needed to have the high schools behind them supporting the CHSS project.  
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The participants would come from different high schools and conduct their research at DTU. The high schools were chosen based on location compared to DTU, the general level of education and competitiveness, as well as the level of science taught.
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<h2 class="media-heading" style="text-align: right;margin-bottom: 35px; color:#0C233F;">Nordic iGEM Conference
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<p style="text-align:justify">In the month of June, most of the DTU Biobuilders team went to Lund in Sweden, where the team from Lund University had invited us to the annual Nordic iGEM conference (NiC) together with all the other Nordic teams. The weekend was filled with iGEM related events, such as workshops on how to effectively communicate and work in a team, and a workshop about the possibilities of bioinformatics. However, most of the weekend was spent connecting with the other iGEM teams and hearing about their projects in a mini-jamboree, where we all participated in poster and presentation sessions.
  
It didn’t take very long until a total of 7 high schools had shown interest and so funding began. To get a strong head-start, they decided to apply for a three-year period. Many hours were spent in perfecting their applications since they knew it was a lot of money they asked for.
 
  
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As they neared the Giant Jamboree they had gotten several recommendations written for their fond application and it was sent out. The entire team is waiting anxiously for the answer in January as everyone sees the great potential in a high school team.
 
  
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<a href="https://2018.igem.org/Team:DTU-Denmark/Description">Project description</a>
 
<a href="https://2018.igem.org/Team:DTU-Denmark/Description">Project description</a>
 
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                       <a href="https://2018.igem.org/Team:DTU-Denmark/Model">Modelling</a>
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<a href="https://2018.igem.org/Team:DTU-Denmark/Parts">Parts overview</a>
 
<a href="https://2018.igem.org/Team:DTU-Denmark/Parts">Parts overview</a>

Latest revision as of 02:32, 18 October 2018

Collaborations

"Alone we can do so little; together we can do so much." – Helen Keller.

We were lucky that a road to strong collaborations had already presented itself to us in the early phases. Due to the success of earlier DTU Biobuilders teams, we had the immense pleasure of hosting the annual DTU BioBrick Tutorial for the Nordic teams. We also owe our thanks to Lynn J. Rothschild approaching us with not only a project, but a chance to collaborate with the strong and competent team from Stanford-Brown-RISD across the world. However, we also wanted to see how far our own collaborative skills could take us and thus our combined work with the University of Copenhagen began. As the Lund team from Sweden were the successful winners of the Nordic iGEM Conference in 2017, we had the amazing opportunity of visiting Lund for this event in June together with a lot of familiar and new faces.

The question of why we want to travel to Mars

University of Copenhagen & Exeter

For the Human Practices part of the project, we decided quite early on to do a collaboration with the University of Copenhagen and their iGEM team. Our universities are already tightly bound together and seeing as we both did space-related projects and were familiar with each other and our respective projects, due to having met at the BioBrick Tutorial and later at the Nordic iGEM Conference, it made perfect sense to have our teams meet with the aim to elevate the ambitions of our respective human practices projects by joining forces. We agreed that it would be fun to explore a new side of our natural science-brains and write a report founded in the humanities. We found that this was quite unusual in previous iGEM space projects and therefore we found it relevant to question issues related to space travel in a new way. The University of Exeter had reached out to do a space-related human practices project and together, we decided to do a three-part space-related humanities report, with each university exploring the same overall issue on the basis of different fields. DTU engaged in history, UCopenhagen in rhetoric, and Exeter in ethics.

We knew quite early on that we wanted the report to cover the possibility of colonization on Mars. At DTU, we were intrigued to look retrospectively at the space race that lead to the moon landing and to look into the political situation at the time, in order to draw parallels to what might need to happen now to land a manned mission on Mars. The pressing matter would subsequently be what to do when we do land a mission on Mars by looking at previous colonization and imperialism and look into some of the driving factors of that era.

Brainstorming was a big part of our first Skype meetings, and because of our early start, our discussions managed to shape parts of each others Human Practice projects. We continuously separated to do research and met online to discuss our findings in relation to the further development of the project. This way, we slowly found a common angle for the project which ended up being “why colonize Mars?”. We would structure the report so that it discussed the issues in different ways: explaining, analyzing, interpreting, and evaluating. We sorted the report in a structured manner. Firstly, exploring previous events in history and relating them to Mars colonization, then analyzing rhetorically the most cogent arguments for and against Mars colonization, and finally discussing the ethical implications of Mars colonization. We would do all of this while also determining the current measures set in place to prevent contamination on Mars, and other extraterrestrial environments.

You can read the report here.

All in all, our collaboration has been a huge success, where we have gotten the opportunity to work on our projects in a completely different way, and perhaps more importantly, worked with other incredible universities and people. Thank you Frida, Victoria, and Matt!

As UCopenhagen got the offer to participate at Københavns Kulturnat (the biggest cultural event in Copenhagen, translates to “Copenhagen Culture Night”), they decided to extend the Danish-based part of the collaboration to include that event as well. This has enabled us to reach a large number of people to discuss our report.

Read more about Københavns Kulturnat here.

Discussing the road to Mars

Stanford-Brown-RISD

The supervisor of the Stanford-Brown-RISD (SBR) team, Lynn J. Rothschild, approached us back in the early days of the team with a project that quickly got everyone's attention: Using the mycelium of fungi to help NASA with building a base on Mars. Her own team was also participating in this, but they decided to concentrate on providing the substrate for the fungal materials by using cyanobacteria. Therefore, we have been meeting multiple times over the course of the project, discussing in the beginning what was needed to accomplish the result and which ideas we each had. Furthermore, any problems we had and potential solutions were also brought up.

Fig. 2a - Lynn visited us at DTU.


Lynn Rothschild visited us a couple of times, where she was very helpful in guiding us through what the SBR team was doing and giving us suggestions on what we should be focusing on.

Fig. 2a - The DTU team having a skype meeting with three members of the Stanford Brown team. Fig. 2b - Kyle standing with Lynn and three members of the Stanford team.

Both of our projects rely on the idea of using fungal bricks, and without consulting each other, we discovered that we each had been testing on which substrate to grow it on. We then agreed to send DTU grown bricks to the US, so that they could verify their results on our bricks. The delivery of bricks happened when our supervisor Kyle visited their team.

The importance of modeling the project was also a focus of both our teams. Both teams have created models that describe different stages of the project. Our models can be linked together to describe the whole process from growing the mycelium from a single spore to figuring out how the biomass develops, from how long it takes for a fungus to fill out a form to describe the mechanical properties of the fungus needed to design the final structure on Mars. The illustration below shows the connection between our models.

Nordic iGEM Conference

In the month of June, most of the DTU Biobuilders team went to Lund in Sweden, where the team from Lund University had invited us to the annual Nordic iGEM conference (NiC) together with all the other Nordic teams. The weekend was filled with iGEM related events, such as workshops on how to effectively communicate and work in a team, and a workshop about the possibilities of bioinformatics. However, most of the weekend was spent connecting with the other iGEM teams and hearing about their projects in a mini-jamboree, where we all participated in poster and presentation sessions.