Difference between revisions of "Team:UMaryland/Hardware"

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<div class="titleText">Hardware</div>
 
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<div class="subtitleText">PET NET - Maximizing PETase Activity</div>
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<h1>Hardware</h1>
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<h3>Best Hardware Special Prize</h3>
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<p>iGEM is about making teams of students making synthetic biology projects. We encourage teams to work with parts and build biological devices in the lab. But we are inclusive and want all teams to work on many other types of problems in synbio. Robotic assembly, microfluidics, low cost equipment and measurement hardware are all areas ripe for innovation in synbio. </p>
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The PET Net is a biocatalytic flow reactor designed to maximize the degradation efficiency of the PETase fusion protein. The system consists of a series of interconnected tubes, the inner surface of which are covered in bacterial cellulose. A slurry of shredded PET plastic and the PETase fusion protein is pumped into the constantly circulating reactor. One of the subunits of the fusion protein is a cellulose binding domain. This semi immobilizes the protein on to the bacterial cellulose which coats the inside of the tubes. Since the binding is not as strong as a chemical bond, the protein will be able to flow with the slurry. The combination of semi immobilization and free flowing protein will help increase the exposure of multiple surfaces of PET to the active sites of PETase. By increasing the number of interactions of the plastic and the protein the likelihood of a successful catalytic reaction increases. The modular design of PET Net allows for rapid scalability. The reactor modules can be easily produced and quickly assembled which gives the system the flexibility to be used in a variety of situations. The system is cell free. This makes it both more safe to operate in non-laboratory settings, and removes the interference of cells with the catalysis of degradation.  
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Teams who are interested in working with hardware as a side project are encouraged to apply for the hardware award.
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To compete for the <a href="https://2018.igem.org/Judging/Awards">Best Hardware prize</a>, please describe your work on this page and also fill out the description on the <a href="https://2018.igem.org/Judging/Judging_Form">judging form</a>.
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You must also delete the message box on the top of this page to be eligible for this prize.
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<img src="https://static.igem.org/mediawiki/2018/a/a4/T--UMaryland--petnetpipes2.png" style="max-width: 100%" alt="Waluigi Time!">
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<img src="https://static.igem.org/mediawiki/2018/8/84/T--UMaryland--petnetconnector.png" style="max-width: 100%" alt="Waluigi Time!">
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<div class="imageBoxDescription">Figure 1 - Internal Schematics of the PET NET</div>
<h3>Inspiration</h3>
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<p>You can look at what other teams did to get some inspiration! <br />
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Here are a few examples:</p>
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<li><a href="https://2016.igem.org/Team:Valencia_UPV">2016 Valencia UPV</a></li>
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<li><a href="https://2016.igem.org/Team:Aachen">2016 Aachen </a></li>
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<li><a href="https://2015.igem.org/Team:TU_Delft">2015 TU Delft  </a></li>
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<img src="https://static.igem.org/mediawiki/2018/7/7c/T--UMaryland--petnet2.png" style="max-width: 100%" alt="Waluigi Time!">
<li><a href="https://2015.igem.org/Team:TU_Darmstadt">2015 TU Darmstadt</a></li>
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<img src="https://static.igem.org/mediawiki/2018/1/1c/T--UMaryland--petnetii.png" style="max-width: 100%" alt="Waluigi Time!">
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<div class="imageBoxDescription">Figure 2 - Model of Assembled PET NET</div>
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Revision as of 00:31, 16 October 2018

Template Title Template Title

Hardware
PET NET - Maximizing PETase Activity
The PET Net is a biocatalytic flow reactor designed to maximize the degradation efficiency of the PETase fusion protein. The system consists of a series of interconnected tubes, the inner surface of which are covered in bacterial cellulose. A slurry of shredded PET plastic and the PETase fusion protein is pumped into the constantly circulating reactor. One of the subunits of the fusion protein is a cellulose binding domain. This semi immobilizes the protein on to the bacterial cellulose which coats the inside of the tubes. Since the binding is not as strong as a chemical bond, the protein will be able to flow with the slurry. The combination of semi immobilization and free flowing protein will help increase the exposure of multiple surfaces of PET to the active sites of PETase. By increasing the number of interactions of the plastic and the protein the likelihood of a successful catalytic reaction increases. The modular design of PET Net allows for rapid scalability. The reactor modules can be easily produced and quickly assembled which gives the system the flexibility to be used in a variety of situations. The system is cell free. This makes it both more safe to operate in non-laboratory settings, and removes the interference of cells with the catalysis of degradation.
Waluigi Time! Waluigi Time!
Figure 1 - Internal Schematics of the PET NET
Waluigi Time! Waluigi Time!
Figure 2 - Model of Assembled PET NET

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