Team:Tongji-Software/Attributions

Attribution
What makes Alpha Ant meaningful and wonderful is those people’s great work.
Since we are from different majors, all things can be covered by everyone of us. More information about team members could be found in Team.Generally, we have three main sessions: biology logic thinking and investigation, programming and modeling, design.

It’s more like a workflow. At first, everyone is engaged in previous biology research and decide to do a topic about pathway design. Secondly, biology group try to get access to different database and deliver data to programming group. Then data processing and main part programming are followed. At last, design group can figure out how to show our software reasonably and wiki design.
It’s more like a workflow. At first, everyone is engaged in previous biology research and decide to do a topic about pathway design. Secondly, biology group try to get access to different database and deliver data to programming group. Then data processing and main part programming are followed. At last, design group can figure out how to show our software reasonably and wiki design.
overview

Previous Research
Haiyan He, Xiaotian Yu, Zhichao Ma and Wei Cao are responsible for learning synthetic biology and mining proper topic.
Wei Cao investigated the barriers that experimenters could occur in metabolic engineering and interviewed Professor Ping Li for Tongji University for general workflow of metabolic pathway research.
Zhichao Ma communicated with postgraduate students major in bioinformatics.
Xiangzhen Li did some research on graph theoretic algorithm.

Database
Xiaotian Yu, Xiangzhen Li and Zhichao Ma were responsible for getting data from KEGG Database and data processing.
Haiyan He and Xiaotian Yu were responsible for calculating thermodynamic data by using equilibrator.
Zhichao Ma and Wei Cao was responsible for getting data from Brenda, ChEBI, DrugBank and KnowledgeBase.