Difference between revisions of "Team:BJRS China/InterLab"

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<h2>I.Calibrations</h2>
 
<h2>I.Calibrations</h2>
 
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<p><font size = "2"><b>OD<sub>600</sub> reference point:</b></font></p>
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<p><font size = "3"><b>OD<sub>600</sub> reference point:</b></font></p>
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                                 <font size = "1">Table 1. OD600 Reference Point.</font>
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                                 <p><font size = "1">Table 1. OD600 Reference Point.</font></p>
 
<img src="https://static.igem.org/mediawiki/2018/a/af/T--BJRS_China--OD600_Reference_Point.png" alt = "OD<sub>600</sub> Reference Point" style = "width: 30%"><br>
 
<img src="https://static.igem.org/mediawiki/2018/a/af/T--BJRS_China--OD600_Reference_Point.png" alt = "OD<sub>600</sub> Reference Point" style = "width: 30%"><br>
 
 
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                                 <p>Particle Standard Curve</p>
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                                 <p><font size = "3"><b>Particle Standard Curve</b></font></p>
 
<img src = "https://static.igem.org/mediawiki/2018/e/ef/T--BJRS_China--Particle_Standard_Curve.jpg" alt = "Particle Standard Curve" style = "width: 50%"><br>
 
<img src = "https://static.igem.org/mediawiki/2018/e/ef/T--BJRS_China--Particle_Standard_Curve.jpg" alt = "Particle Standard Curve" style = "width: 50%"><br>
 
<font size = "1">Figure 1. Particle Standard Curve.</font>
 
<font size = "1">Figure 1. Particle Standard Curve.</font>
 
</div>
 
</div>
 
<div class="inlabdiv">
 
<div class="inlabdiv">
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                                 <p>Particle Standard Curve(log scale)</p>
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                                 <p><font size = "3"><b>Particle Standard Curve(log scale)</b></font></p>
 
<img src = "https://static.igem.org/mediawiki/2018/d/dd/T--BJRS_China--Particle_Standard_Curve%28log_scale%29.jpg" alt = "Particle Standard Curve(log scale)" style = "width: 50%"><br>
 
<img src = "https://static.igem.org/mediawiki/2018/d/dd/T--BJRS_China--Particle_Standard_Curve%28log_scale%29.jpg" alt = "Particle Standard Curve(log scale)" style = "width: 50%"><br>
 
<font size = "1">Figure 1. Particle Standard Curve(log scale).</font>
 
<font size = "1">Figure 1. Particle Standard Curve(log scale).</font>
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                         <div class="inlabdiv">
 
                         <div class="inlabdiv">
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                                 <p>Fluorescein Standard Curve</p>
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                                 <p><font size = "3"><b>Fluorescein Standard Curve</b></font></p>
 
<img src = "https://static.igem.org/mediawiki/2018/9/95/T--BJRS_China--Fluorescein_Standard_Curve.png" alt = "Fluorescein Standard Curve" style = "width: 50%"><br>
 
<img src = "https://static.igem.org/mediawiki/2018/9/95/T--BJRS_China--Fluorescein_Standard_Curve.png" alt = "Fluorescein Standard Curve" style = "width: 50%"><br>
 
<font size = "1">Figure 2. Fluorescein Standard Curve.</font>
 
<font size = "1">Figure 2. Fluorescein Standard Curve.</font>
 
</div>
 
</div>
 
                         <div class="inlabdiv">
 
                         <div class="inlabdiv">
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                                 <p>Fluorescein Standard Curve(log scale)</p>
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                                 <p><font size = "3"><b>Fluorescein Standard Curve(log scale)</b></font></p>
 
<img src = "https://static.igem.org/mediawiki/2018/9/97/T--BJRS_China--Fluorescein_Standard_Curve%28log_scale%29.png" alt = "Fluorescein Standard Curve(log scale)" style = "width: 50%"><br>
 
<img src = "https://static.igem.org/mediawiki/2018/9/97/T--BJRS_China--Fluorescein_Standard_Curve%28log_scale%29.png" alt = "Fluorescein Standard Curve(log scale)" style = "width: 50%"><br>
 
<font size = "1">Figure 2. Fluorescein Standard Curve(log scale).</font>
 
<font size = "1">Figure 2. Fluorescein Standard Curve(log scale).</font>
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<h2>II.Cell Measurements</h2>
 
<h2>II.Cell Measurements</h2>
 
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<p><b>Fluorescence Raw</b></p>
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<p><font size = "3"><b>Fluorescence Raw</b></font></p>
 
<p><font size = "1">Table 2. Raw Plate Reader Measurements of Fluorescence Raw at 0 hour.</font></p>
 
<p><font size = "1">Table 2. Raw Plate Reader Measurements of Fluorescence Raw at 0 hour.</font></p>
 
<img src = "https://static.igem.org/mediawiki/2018/0/06/T--BJRS_China--Fluorescence_Raw_0_hour.jpg" alt = "Fluorescence at 0h" style = "width: 70%"><br>
 
<img src = "https://static.igem.org/mediawiki/2018/0/06/T--BJRS_China--Fluorescence_Raw_0_hour.jpg" alt = "Fluorescence at 0h" style = "width: 70%"><br>
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</div>
 
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<p><b>Abs<sub>600</sub> Raw</b></p>
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<p><font size = "3"><b>Abs<sub>600</sub> Raw</b></font></p>
 
<p><font size = "1">Table 4. Raw Plate Reader Measurements of Abs600 Raw at 0 hour.</font></p>
 
<p><font size = "1">Table 4. Raw Plate Reader Measurements of Abs600 Raw at 0 hour.</font></p>
 
<img src = "https://static.igem.org/mediawiki/2018/5/59/T--BJRS_China--Abs600_Raw_0_hour.jpg" alt = "Abs600 at 0h" style = "width: 70%"><br>
 
<img src = "https://static.igem.org/mediawiki/2018/5/59/T--BJRS_China--Abs600_Raw_0_hour.jpg" alt = "Abs600 at 0h" style = "width: 70%"><br>

Revision as of 14:56, 13 October 2018

BJRS

InterLab

Preparation

What Is Interlab?

This is the 5th year of InterLab and we have the following question: Can we reduce lab-to-lab variability in fluorescence measurements by normalizing to absolute cell count or colony-forming units (CFUs) instead of OD?

Materials

DNA/Plasmids

  1. Negative Control: BBa_R0040
  2. Positive Control: BBa_I20270
  3. Test Device 1: BBa_J364000
  4. Test Device 2: BBa_J364001
  5. Test Device 3: BBa_J364002
  6. Test Device 4: BBa_J364007
  7. Test Device 5: BBa_J364008
  8. Test Device 6: BBa_J364009

Apparatus

  • 96 well plates (provided by Peking University)
  • Plate reader
  • Foil covered 50 ml tube
  • Eppendorf tubes
  • Pipettes

Materials

  • LUDOX CL-X
  • Silica beads
  • Fluorescein
  • Phosphate buffered saline
  • LB media
  • Chloramphenicol
  • LB plates
  • distilled water

Protocols

We followed the protocol provided by iGEM HQ so that inter-laboratory errors can be reduced. Protocols we used can be found here:

2018 InterLab Plate Reader Protocol
Help: Protocols/Transformation

Results

The results are shown in the tables and figures.

I.Calibrations

OD600 reference point:

Table 1. OD600 Reference Point.

OD<sub>600</sub> Reference Point

Particle Standard Curve

Particle Standard Curve
Figure 1. Particle Standard Curve.

Particle Standard Curve(log scale)

Particle Standard Curve(log scale)
Figure 1. Particle Standard Curve(log scale).

Fluorescein Standard Curve

Fluorescein Standard Curve
Figure 2. Fluorescein Standard Curve.

Fluorescein Standard Curve(log scale)

Fluorescein Standard Curve(log scale)
Figure 2. Fluorescein Standard Curve(log scale).

II.Cell Measurements

Fluorescence Raw

Table 2. Raw Plate Reader Measurements of Fluorescence Raw at 0 hour.

Fluorescence at 0h

Table 3. Raw Plate Reader Measurements of Fluorescence Raw at 6 hours.

Fluorescence at 6h

Abs600 Raw

Table 4. Raw Plate Reader Measurements of Abs600 Raw at 0 hour.

Abs600 at 0h

Table 5. Raw Plate Reader Measurements of Abs600 Raw at 6 hours.

Abs600 at 6h