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− | <div class="col-10"><small class="h6 text-default">A potential reason for this missing component is that the model assumed that the fluid is static instead of dynamic, due to the constant flow rate of fluid moving through the chip ( | + | <div class="col-10"><small class="h6 text-default">A potential reason for this missing component is that the model assumed that the fluid is static instead of dynamic, due to the constant flow rate of fluid moving through the chip <b>(1)</b>. In a dynamic model, the total droplet volume is characterized by the static volume and the pinching volume <b>(1)</b>. The pinching volume is formed during the droplet’s fall when the droplet breaks off the tube <b>(1)</b>. </p> |
− | However, after researching the physical phenomenon behind dynamic droplets we realized that a complete dynamic model, as described in Zhang et al, required measuring many parameters, making it difficult to implement. Therefore, we decided to create our dynamic model empirically by adding a correction factor, which would depend on flow rate. </p> | + | However, after researching the physical phenomenon behind dynamic droplets we realized that a complete dynamic model, as described in <i>Zhang et al</i>, required measuring many parameters, making it difficult to implement <b>1</b>. Therefore, we decided to create our dynamic model empirically by adding a correction factor, which would depend on flow rate. </p> |
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− | <div class="col-10"><img src="https://static.igem.org/mediawiki/2018/ | + | <div class="col-10"><img src="https://static.igem.org/mediawiki/2018/2/2a/T--BostonU_HW--droplet_volume_new.jpeg" style="width: 80%;" class="img-fluid"></div> |
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<small class="h6 text-default">Figure 1. Plot of the average experimental droplet volume versus the predicted volume from the static model.</p></small> | <small class="h6 text-default">Figure 1. Plot of the average experimental droplet volume versus the predicted volume from the static model.</p></small> | ||
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<div class="col-10"><img src="https://static.igem.org/mediawiki/2018/a/a9/T--BostonU_HW--model_cf_avg.png" style="width: 80%;" class="img-fluid"></div> | <div class="col-10"><img src="https://static.igem.org/mediawiki/2018/a/a9/T--BostonU_HW--model_cf_avg.png" style="width: 80%;" class="img-fluid"></div> | ||
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− | <small class="h6 text-default">Figure 2. Plot of the correction factors calculate based on the experimental volumes at various flow rates against the average correction factor. </small> | + | <small class="h6 text-default">Figure 2. Plot of the correction factors calculate based on the experimental volumes at various flow rates against the average correction factor. </p> |
+ | |||
+ | Unfortunately, these experiments did not result in a consistent correction factor that can be used across different flow rates. While we observed an increase in droplet size as flow rate increased, we concluded that either more data was necessary to extrapolate an experimental correction factor or more However, we learned other important information to adjust the current static model. Outside of the 2.5 mL/hr trial, the experimental droplet volumes have low standard deviates and are centered around the average volume size. Because of this we decided to multiply the static model by a factor of 1.33 to account for the difference between average and static model. </p> | ||
+ | |||
+ | <b>References:</b></p> | ||
+ | <ol> | ||
+ | <li> Zhang, D. F., and H. A. Stone. “Drop Formation in Viscous Flows at a Vertical Capillary Tube.” Physics of Fluids 9, no. 8 (August 1997): 2234–42. https://doi.org/10.1063/1.869346. </li> | ||
+ | </ol> | ||
+ | </small> | ||
</div> | </div> | ||
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Revision as of 06:13, 17 October 2018
Modeling
Droplet Characterization
Due to the relatively low flow rate that fluid moves at in microfluidic chips, outputs offloaded from microfluidic chips typically form droplets as opposed to a continuous stream. Therefore, in order to accurately dispense these droplets into wells, we created a model to predict their volume so that users can control the end sample volume in the well of interest. To develop the model we used a free-body diagram to identify the forces present right before a droplet falls off the nozzle. Using the sum of the forces we were able to model the volume of the droplet. To test the model we ran preliminary experiments to calculate volumes and compared them against the theoretical value given by the model. Because we can’t directly measuring the volume of the droplet, we used the time interval between droplets and the given flow rate to calculate what the experimental volume is.- the theoretical volume from the model was less than the experimental
- this difference, on average, increased with flow rate
A potential reason for this missing component is that the model assumed that the fluid is static instead of dynamic, due to the constant flow rate of fluid moving through the chip (1). In a dynamic model, the total droplet volume is characterized by the static volume and the pinching volume (1). The pinching volume is formed during the droplet’s fall when the droplet breaks off the tube (1).
However, after researching the physical phenomenon behind dynamic droplets we realized that a complete dynamic model, as described in Zhang et al, required measuring many parameters, making it difficult to implement 1. Therefore, we decided to create our dynamic model empirically by adding a correction factor, which would depend on flow rate.
Zhang et al.
- Zhang, D. F., and H. A. Stone. “Drop Formation in Viscous Flows at a Vertical Capillary Tube.” Physics of Fluids 9, no. 8 (August 1997): 2234–42. https://doi.org/10.1063/1.869346.