Difference between revisions of "Team:SJTU-BioX-Shanghai/Demonstrate"

 
(18 intermediate revisions by 6 users not shown)
Line 8: Line 8:
 
// set the active page
 
// set the active page
 
         $(".menu_item").eq(1).find("span").eq(0).css("background-color","rgba(200,200,200,0.5)");
 
         $(".menu_item").eq(1).find("span").eq(0).css("background-color","rgba(200,200,200,0.5)");
          
+
         $(".menu_item").eq(1).find(".submenu_item").eq(3).css("background-color","rgba(200,200,200,0.5)");
 
     });
 
     });
 
////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
 
////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
Line 27: Line 27:
 
                        
 
                        
 
                 <div class="content_nav_top">
 
                 <div class="content_nav_top">
                     <img src="https://static.igem.org/mediawiki/2018/d/de/T--SJTU-BioX-Shanghai--content_nav_bac_0.png
+
                     <img src="https://static.igem.org/mediawiki/2018/c/c3/T--SJTU-BioX-Shanghai--content_nav_top.png"/>
"/>
+
 
                     <div class="content_nav_logo">
 
                     <div class="content_nav_logo">
 
                         <a href="" title="return to homepage"><img src="https://static.igem.org/mediawiki/2018/1/17/T--SJTU-BioX-Shanghai--content_nav_logo.png
 
                         <a href="" title="return to homepage"><img src="https://static.igem.org/mediawiki/2018/1/17/T--SJTU-BioX-Shanghai--content_nav_logo.png
Line 43: Line 42:
  
 
                             <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                             <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
                     Section1
+
                      
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
  
Line 54: Line 53:
  
 
                           <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                           <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
                     Section2
+
                      
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
  
Line 65: Line 64:
 
                              
 
                              
 
<!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
<!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
                     Section3
+
                      
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
  
Line 76: Line 75:
  
 
                             <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                             <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
                     Section4
+
                      
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
  
Line 87: Line 86:
 
                              
 
                              
 
<!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
<!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
                     Section5
+
                      
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
 
                     <!--****** Modify the section title here and leave the rest nav-bar settings untact *************-->
  
Line 96: Line 95:
 
                 </div>
 
                 </div>
 
                  
 
                  
                <div class="content_nav_bottom">
+
              <div class="content_nav_bottom">
                     <img src="https://static.igem.org/mediawiki/2018/2/21/T--SJTU-BioX-Shanghai--content_nav_bac2.png
+
                     <img class="content_nav_b_bac" src="https://static.igem.org/mediawiki/2018/1/1f/T--SJTU-BioX-Shanghai--content_nav_bottom.png" />
"/>
+
                    <a title="Go to story page" href="https://2018.igem.org/Team:SJTU-BioX-Shanghai/Story"><img class="content_nav_b_story_badge" src="https://static.igem.org/mediawiki/2018/d/d0/T--SJTU-BioX-Shanghai--story_badge.png"></a>
 
                 </div>
 
                 </div>
  
Line 112: Line 111:
 
          
 
          
 
         <div class="text">
 
         <div class="text">
             <h1>Demonstrate</h1>
+
             <h1>Demonstration</h1>
 
            
 
            
             <p>Synthetic biology is first about great ideas and practical designs. But what truly makes a project a good one is that it can be brought into reality. So our team has been working hard towards this goal throughout the whole competition season. Now we want to explain to you what effort we had done and what results we got to prove our project can actually work in reality.
+
             <p>Great ideas and practical designs are the core of synthetic biology development. But what truly makes a project outstanding is its applicability in real life. So our team spent a lot of efforts on pushing our project towards this ultimate goal. Now we would like to illustrate the efforts we had made and the actual results that testify the applicability of our device in real life.           </p>
            </p>
+
 
              
 
              
             <p>In terms of experiments performed in wet lab, it consists of four parts, corresponding to four steps in our project’s colon cancer diagnosis process. First, we tested the adhesion of the engineered E.coli to the colon cancer cell lines HT29. Then, we observed gas vesicles in the cancerated tissue of mouse by ultrasound. Meanwhile we proved that the nitric oxide biosensor can react to the nitric oxide and synthesize the medicine we needed. Finally, we made sure biosafety by cell lysis, tested by plate count method. For more details, go to the <a title="Results" href="https://2018.igem.org/Team:SJTU-BioX-Shanghai/Results">Results</a>page.
+
             <p>In terms of experiments performed in wet lab, four parts were involved corresponding to four steps in our project’s colon cancer diagnosis process. </p>
 +
<p> First, we examined the T-antigen expression as well as adhesive properties between engineered <i>E.coli</i> and colorectal cancer cell. The results from both cell and mouse experiments returns positive, illustrating that our device is capable of specifically binding with cancerous cells.</p>
 +
<p>Then, we observed gas vesicles in the cancerous tissue of mouse intestines under ultrasound, receiving not only positive results in the distinctness of vesicle signals, but also determination of cancerous section and normal ones. Meanwhile we’ve proved that our nitric oxide biosensor can react to nitric oxide in the environment and synthesize the medicine we needed. Finally, we made sure biosafety by constructing cell lysis pathway that has been tested by plate count method. For more details, see <a title="Results" href="https://2018.igem.org/Team:SJTU-BioX-Shanghai/Results">Results</a> page.
 
             </p>
 
             </p>
 
              
 
              
             <p>Although we had done theses experiments listed above in our lab, from E.coli to cell lines, and mouses last to prove our project,  we still can not say that our project can work functionally when it comes human body. So we stimulated the environment in human’s colon and the status of our engineered E.coli to observe these bacteria’s behaviors. What’s more, in order to make sure that even ultrasonic apparatus in normal hospitals can observe gas vesicles, that is to image the cancerous cells, we modeled the relationship between the frequency of ultrasound and the intensity of gas vesicles’ signal. The results show great possibility to make this brand diagnosis method accessible to even the most normal hospitals in a small city in China. More details can be found at <a title="Modeling" href="https://2018.igem.org/Team:SJTU-BioX-Shanghai/Medeling">Modeling</a>pages.
+
             <p>Although we had accomplished these experiments mentioned above, we are still not hundred percent sure about whether our project can function properly in real situation in vivo. To solve this problem we built a model to stimulate the environment in human’s colon and the possible behavior of the bacteria. Moreover, in order to make sure that gas vesicle signals can be observed through clinical ultrasonic equipment we built another model to clarify the relationship between the frequency of ultrasound and the intensity of gas vesicles’ signal. The results show great possibility in making this brand new diagnosis method accessible to even the most common hospitals. More details can be found at the <a title="Model" href="https://2018.igem.org/Team:SJTU-BioX-Shanghai/Model">Model</a> pages.
 
             </p>
 
             </p>
 
            
 
            
             <p>While we kept pushing ourself to make progress in both wet lab and dry lab, we also reached out to experts in related fields, leading enterprises, patients in hospital and general public. We’re glad that experts gave a lot of helpful advice to assist us in developing our project. International enterprises such as Roche gave us a better understanding of medicine and public’s need to the convenient, fast, cheap and noninvasive diagnosis, We’re surprised so many people are afraid of traditional diagnosis method, such as colonoscopy and such widely acceptance of brand diagnosis ways. Thus, we collaborated with 2018 iGEM team Tongji_China to make our engineered systems into a capsule, a real product, taking the first step to make this project applicable to practical use.
+
             <p>While we kept pushing ourselves to make progress in both wet lab and dry lab, we also reached out to experts in relating fields, leading enterprises, patients in hospital and general public. We’re glad that the experts we enquired gave a lot of helpful advice to assist us in developing our project. </p>
</p>
+
<p>International enterprises such as Roche gave us a better understanding of medicine and public’s need to a convenient, noninvasive diagnosis method. We’re surprised to see that there are so many people are actually afraid of traditional diagnosis method like colonoscopy and how widely brand new diagnosis ways are accepted. Thus, we collaborated with 2018 iGEM team Tongji_China to make our engineered systems into a capsule, a real product, taking the first step to make this project applicable to practical use. </p>
  
           <p>What’s worth our second thoughts is biosafety since our engineered bacteria is designed to be took orally by people to get to their colon and function. Despite the suicide mechanism we designed to prevent these engineered bacteria stay in human body, we strictly obeyed every rules and regulations approved by iGEM Safety Committee and by our country and institution. We also set up a standard to evaluate if an iGEM project is safe enough and you can see further details about biosafety in this page
+
           <p>On the way developing our project to real device, biosafety is definitely something that requires detailed design and awareness, especially when our device is designed to be consumed orally. Despite the suicide mechanism we’ve designed to prevent our device from remaining in vivo, we also strictly obeyed every rules and regulations approved by iGEM Safety Committee as well as our nation and institution. We also set up a standard to evaluate the safety level of an iGEM project and you can see further details at <a title="" href="https://2018.igem.org/Team:SJTU-BioX-Shanghai/Safety">Biosafety</a> page.
 
           </p>
 
           </p>
  

Latest revision as of 14:55, 5 December 2018

Demonstration

Great ideas and practical designs are the core of synthetic biology development. But what truly makes a project outstanding is its applicability in real life. So our team spent a lot of efforts on pushing our project towards this ultimate goal. Now we would like to illustrate the efforts we had made and the actual results that testify the applicability of our device in real life.

In terms of experiments performed in wet lab, four parts were involved corresponding to four steps in our project’s colon cancer diagnosis process.

First, we examined the T-antigen expression as well as adhesive properties between engineered E.coli and colorectal cancer cell. The results from both cell and mouse experiments returns positive, illustrating that our device is capable of specifically binding with cancerous cells.

Then, we observed gas vesicles in the cancerous tissue of mouse intestines under ultrasound, receiving not only positive results in the distinctness of vesicle signals, but also determination of cancerous section and normal ones. Meanwhile we’ve proved that our nitric oxide biosensor can react to nitric oxide in the environment and synthesize the medicine we needed. Finally, we made sure biosafety by constructing cell lysis pathway that has been tested by plate count method. For more details, see Results page.

Although we had accomplished these experiments mentioned above, we are still not hundred percent sure about whether our project can function properly in real situation in vivo. To solve this problem we built a model to stimulate the environment in human’s colon and the possible behavior of the bacteria. Moreover, in order to make sure that gas vesicle signals can be observed through clinical ultrasonic equipment we built another model to clarify the relationship between the frequency of ultrasound and the intensity of gas vesicles’ signal. The results show great possibility in making this brand new diagnosis method accessible to even the most common hospitals. More details can be found at the Model pages.

While we kept pushing ourselves to make progress in both wet lab and dry lab, we also reached out to experts in relating fields, leading enterprises, patients in hospital and general public. We’re glad that the experts we enquired gave a lot of helpful advice to assist us in developing our project.

International enterprises such as Roche gave us a better understanding of medicine and public’s need to a convenient, noninvasive diagnosis method. We’re surprised to see that there are so many people are actually afraid of traditional diagnosis method like colonoscopy and how widely brand new diagnosis ways are accepted. Thus, we collaborated with 2018 iGEM team Tongji_China to make our engineered systems into a capsule, a real product, taking the first step to make this project applicable to practical use.

On the way developing our project to real device, biosafety is definitely something that requires detailed design and awareness, especially when our device is designed to be consumed orally. Despite the suicide mechanism we’ve designed to prevent our device from remaining in vivo, we also strictly obeyed every rules and regulations approved by iGEM Safety Committee as well as our nation and institution. We also set up a standard to evaluate the safety level of an iGEM project and you can see further details at Biosafety page.