Difference between revisions of "Team:Grenoble-Alpes/Attributions"

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<center><h3>Engineering</h3><center>
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<center><h2>Engineering</h2><center>
 
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<table id="attri" style="font-weight:normal">
 
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<tr><td><p>Pipetting Module<br>
 
<tr><td><p>Pipetting Module<br>
 
<tmb>Jean Le Pennec</tmb></p></td>
 
<tmb>Jean Le Pennec</tmb></p></td>
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<td rowspan="3"><center><img src="https://static.igem.org/mediawiki/2018/9/9a/T--Grenoble-Alpes--pipetteattributions.jpg" style="transform:rotate(90deg); width="80%;"><center></td></tr>
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<td rowspan="3"><center><img src="https://static.igem.org/mediawiki/2018/9/9a/T--Grenoble-Alpes--pipetteattributions.jpg" style="transform:rotate(90deg); width="50%;"><center></td></tr>
 
<tr><td><p>Overall 3D Model of the system<br>
 
<tr><td><p>Overall 3D Model of the system<br>
 
Mainly <tmb>Lucas Sanc&eacute;r&eacute;</tmb> with the help of <tmb>Jean Le Pennec</tmb> &amp; <tmb>Thomas Goyet</tmb></p></td>
 
Mainly <tmb>Lucas Sanc&eacute;r&eacute;</tmb> with the help of <tmb>Jean Le Pennec</tmb> &amp; <tmb>Thomas Goyet</tmb></p></td>
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<p><outs>Ugo Hevin</outs>, <outs>Franz Bruckert</outs> &amp; <outs>Marianne Weidenhaupt</outs> of the CIME Nanotech Laboratory (Minatec, Grenoble)
 
<p><outs>Ugo Hevin</outs>, <outs>Franz Bruckert</outs> &amp; <outs>Marianne Weidenhaupt</outs> of the CIME Nanotech Laboratory (Minatec, Grenoble)
 
<outs>Nicolas Ruty</outs> &amp; <outs>Julien Traveaux</outs> of the Phelma-INP school</p>
 
<outs>Nicolas Ruty</outs> &amp; <outs>Julien Traveaux</outs> of the Phelma-INP school</p>
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<h3>Difficult technique support</h3>
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<h3>Technical support</h3>
 
<p>Engineers of BioM&eacute;rieux : <outs>Herv&eacute; Rostaing</outs> (general engineering support), <outs>Blaze J&eacute;rome</outs> (mechanics and machining of complex parts of the system), <outs>Fr&eacute;d&eacute;ric Pinston</outs> (fluorescence detection) &amp; <outs>Alain Laurent</outs> (magnetic beads).</p></td></tr>
 
<p>Engineers of BioM&eacute;rieux : <outs>Herv&eacute; Rostaing</outs> (general engineering support), <outs>Blaze J&eacute;rome</outs> (mechanics and machining of complex parts of the system), <outs>Fr&eacute;d&eacute;ric Pinston</outs> (fluorescence detection) &amp; <outs>Alain Laurent</outs> (magnetic beads).</p></td></tr>
 
</table>
 
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<tr><td colspan="2"><p><To do some experiments on <i>Pseudomonas aeruginosa PAO1</i> and their specific phages HER18 the team needed to find a class 2 laboratory which accepts to welcome us. <outs>Javier Yugueros Marcos</outs>, the main BioM&eacute;rieux contact, have immediately responded to this call for help. With the assistance of <outs>Patrice Gracieux</outs>, he organized the coming of C&eacute;cile Razimbaud in BioM&eacute;rieux lab (about security and others). <outs>St&eacute;phanie Borland</outs> has accompanied C&eacute;cile during all the experiments, mostly for the safety rules.</p></td></tr>
 
<tr><td colspan="2"><p><To do some experiments on <i>Pseudomonas aeruginosa PAO1</i> and their specific phages HER18 the team needed to find a class 2 laboratory which accepts to welcome us. <outs>Javier Yugueros Marcos</outs>, the main BioM&eacute;rieux contact, have immediately responded to this call for help. With the assistance of <outs>Patrice Gracieux</outs>, he organized the coming of C&eacute;cile Razimbaud in BioM&eacute;rieux lab (about security and others). <outs>St&eacute;phanie Borland</outs> has accompanied C&eacute;cile during all the experiments, mostly for the safety rules.</p></td></tr>
 
</table>
 
</table>
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<h2>Human Practices</h2>
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<table id="attri" style="font-weight:normal">
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<colgroup>
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<col width="50%" />
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<col width="50%" />
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</colgroup>
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<tr><td colspan="2" id="titletable"><center>WHAT THE TEAM DID<center></td></tr>
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<tr><td><p>Human Practices Leader<br>
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<tmb>Lucas Sanc&eacute;r&eacute;</tmb></p></td><td rowspan="8"><center><img src="https://static.igem.org/mediawiki/2018/8/8d/T--Grenoble-Alpes--actors%26partbuilding.png"></center></td></tr>
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<tr><td><p>Interviews with doctors in Grenoble<br>
 +
<tmb>Lucas Sanc&eacute;r&eacute;</tmb> &amp; <tmb>C&eacute;cile Razimbaud</tmb></p></td></tr>
 +
<tr><td><p>Presentation and interview with future doctors and pharmacists<br>
 +
<tmb>Fanny Garon</tmb>, <tmb>C&eacute;cile Razimbaud</tmb> &amp; <tmb>Thomas Goyet</tmb><br>
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</p></td></tr>
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<tr><td><p>Interview with a patient who received a phage therapy<br>
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<tmb>Elise Aubert</tmb> &amp; <tmb>Fanny Garon</tmb>
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</p></td>
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</tr>
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<tr><td><p>Interview with a member of Oriade, a medical biology laboratory<br>
 +
<tmb>Xandre Gallard</tmb>, <tmb>Jean Le Pennec</tmb> &amp; <tmb>Lucas Sanc&eacute;r&eacute;</tmb> </p></td></tr>
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<tr><td><p>Science popularizing videos overview &amp; Survey design<br>
 +
<tmb>Lucas Sanc&eacute;r&eacute;</tmb>
 +
</p></td></tr>
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<tr><td><p>FMECA study<br>
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<tmb>Xandre Gallard</tmb>
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</p></td>
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</tr>
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<tr><td><p>Scientific popularization video<br>
 +
-Script<br>
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<tmb>Elise Aubert</tmb>, <tmb>Thomas Goyet</tmb> &amp; <tmb>Charles Jabour</tmb><br>
 +
-Recording
 +
<tmb>Fanny Garon</tmb>, <tmb>Jean Le Pennec</tmb> &amp; <tmb>Lucas Sanc&eacute;r&eacute;</tmb><br>
 +
-Animations and video assembly<br>
 +
<tmb>Perrine Rochas</tmb> &amp; <tmb>Xandre Gallard</tmb>
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</p></td>
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</tr>
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<tr><td id="titletable" colspan="2"><p><center>PEOPLE WE WANT TO THANK FOR THE HELP PROVIDED TO THE TEAM IN THIS WORK: <center></p></td></tr>
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<tr><td  colspan="2"><h3>Main ethical reflection, survey design &amp; other HP support</h3>
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<p><adv>Lo&iuml;c Lasek</adv></p><br>
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<h3>Interviewees</h3>
 +
<p><outs>Pr Max Maurin</outs> (chief in the bacteriology service in Grenoble Hospital)<br>
 +
<outs>Pr Olivier Epaulard</outs> (PUPH in infectious diseases and tropical medicine service in Grenoble Hospital)
 +
 +
<br>
 +
<outs>Mr. X</outs>(who received a phage therapy)<br>
 +
Students in Medicine and Pharmacy in Universit&eacute; Grenoble Alpes <br>
 +
<outs>Pierre-Alain Falconnet</outs> from Oriade
 +
<outs>Terence Ericson</outs> (help with the scientific popularization video)
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</p></td></tr>
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</table>
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Revision as of 16:01, 15 October 2018

Template loop detected: Template:Grenoble-Alpes

ATTRIBUTIONS

Through this page, we want to explain the role that each team member has had within the project. We want also to make known, and thank, the other actors of the project who participated in its smooth running.
But before that we will present rapidly our iGEM Grenoble history!

iGEM GRENOBLE-ALPES STORY

1) How did we know iGEM ?

We have never had lessons on iGEM but each member of the team has heard about the competition at Grenoble Alpes University (UGA) or INP school, by the members of the previous team and the teachers who took them framed.
Then, the team met last November via Pierre Cavailles (the main advisor and a biotechnology teacher at the UGA), and that's how the story started.

2) Project Chronology

You can find, in the diagram below, the chronology of the project which summarizes the key points of our work.

NEED DIAGRAM

Attribution

This part describes the work done, and the person who performed it.
The legend below could help you to know if it is a team member, an advisor, an instructor or an outsider thanks to the color code :

Team members
Advisors
Instructors
Outsiders

Engineering

WHAT THE TEAM DID

DNA extraction module & Phages-bacteria Modeling
Thomas Goyet

Temperature control system & Transformation Module
Xandre Gallard

Fluorescence Sensor module
Charles Jabour

Pipetting Module
Jean Le Pennec

Overall 3D Model of the system
Mainly Lucas Sancéré with the help of Jean Le Pennec & Thomas Goyet

Overall code for the control of the system
Jean Le Pennec & Thomas Goyet

PEOPLE WE WANT TO THANK FOR THE HELP PROVIDED TO THE TEAM IN THIS WORK:

Lab and premise support

Ugo Hevin, Franz Bruckert & Marianne Weidenhaupt of the CIME Nanotech Laboratory (Minatec, Grenoble) Nicolas Ruty & Julien Traveaux of the Phelma-INP school

Technical support

Engineers of BioMérieux : Hervé Rostaing (general engineering support), Blaze Jérome (mechanics and machining of complex parts of the system), Frédéric Pinston (fluorescence detection) & Alain Laurent (magnetic beads).

Biology

WHAT THE TEAM DID

Experiments on bacteriophages & their capacity to lyse bacteria
Cécile Razimbaud & Yasmine Taveau

DNA extraction with magnetic beads
Cécile Razimbaud

Construction of the DNA probe :
- detecting an antibiotic resistance marker of Pseudomonas a. PA01
Elise Aubert
- detecting a sequence of an housekeeping gene of Pseudomonas a. PA01
Fanny Garon

Conservation of biological products & Freeze-drying
Perrine Rochas

BBa_J04450 characterisation
Perrine Rochas with the help of Xandre Gallard

PEOPLE WE WANT TO THANK FOR THE HELP PROVIDED TO THE TEAM IN THIS WORK:

Lab support

Sophie Boretti, Martin Ghis and “practical work” service members in general (first floor of Jean Roger Laboratory (University of Grenoble-Alpes)).
The fifth floor members of Jean Roger Laboratory including Pierre Cavailles.
Hélène Coradin, Béatrice Schaack (for her freeze-drying help), and the other members of the eighth floor of Jean Roger Laboratory.


Biology support

Pierre Cavailles & Clément Caffaratti who provided a lot of advice about the Biology and an outstanding support throughout the project.


Bacteriophages experiments support - General support & donation of T5 bacteriophages and their host E. coli F

Cécile Breyton of the Grenoble IBS (Institute of Structural Biology)


Donation of Pseudomonas a. PA01

Ina Attrée of the Grenoble CEA (Office of the Atomic Energy and Alternative Energies)


Donation and sending of PAK-P3 bacteriophages and their host Pseudomonas a. PAK

Laurent Debarbieux of the Pasteur Institute of Paris


Donation of Staphylococcus aureus strains and a specific bacteriophage Sb-1

Grégory Resch & Jonathan Save of the University of Lausanne (Swiss)


Feedback and advices about detection experiments on bacteriophages

Pierre Marcoux of the Grenoble CEA (Office of the Atomic Energy and Alternative Energies)

FURTHER INFORMATIONS AND ACKNOWLEDGEMENTS

Pseudomonas aeruginosa PAO1 and their specific phages HER18 the team needed to find a class 2 laboratory which accepts to welcome us. Javier Yugueros Marcos, the main BioMérieux contact, have immediately responded to this call for help. With the assistance of Patrice Gracieux, he organized the coming of Cécile Razimbaud in BioMérieux lab (about security and others). Stéphanie Borland has accompanied Cécile during all the experiments, mostly for the safety rules.

Human Practices

WHAT THE TEAM DID

Human Practices Leader
Lucas Sancéré

Interviews with doctors in Grenoble
Lucas Sancéré & Cécile Razimbaud

Presentation and interview with future doctors and pharmacists
Fanny Garon, Cécile Razimbaud & Thomas Goyet

Interview with a patient who received a phage therapy
Elise Aubert & Fanny Garon

Interview with a member of Oriade, a medical biology laboratory
Xandre Gallard, Jean Le Pennec & Lucas Sancéré

Science popularizing videos overview & Survey design
Lucas Sancéré

FMECA study
Xandre Gallard

Scientific popularization video
-Script
Elise Aubert, Thomas Goyet & Charles Jabour
-Recording Fanny Garon, Jean Le Pennec & Lucas Sancéré
-Animations and video assembly
Perrine Rochas & Xandre Gallard

PEOPLE WE WANT TO THANK FOR THE HELP PROVIDED TO THE TEAM IN THIS WORK:

Main ethical reflection, survey design & other HP support

Loïc Lasek


Interviewees

Pr Max Maurin (chief in the bacteriology service in Grenoble Hospital)
Pr Olivier Epaulard (PUPH in infectious diseases and tropical medicine service in Grenoble Hospital)
Mr. X(who received a phage therapy)
Students in Medicine and Pharmacy in Université Grenoble Alpes
Pierre-Alain Falconnet from Oriade Terence Ericson (help with the scientific popularization video)