|
|
(16 intermediate revisions by 3 users not shown) |
Line 3: |
Line 3: |
| <html> | | <html> |
| <div class="main-container"> | | <div class="main-container"> |
− | <div id="page-heading" class="container-fluid page-heading" style="background-image: url(http://https://2018.igem.org/File:T--BNU-China--human_practices.jpg);"> | + | <div id="page-heading" class="container-fluid page-heading" style="background-image: url(https://static.igem.org/mediawiki/2018/b/b1/T--BNU-China--human_practices.jpg);"> |
− | <h3 style="font-family:Helvetica;"> Practices</h3> | + | <!--<h3 style="font-family:Helvetica;"> Practices</h3>--> |
| </div> | | </div> |
| <div id="Overview"> | | <div id="Overview"> |
Line 10: |
Line 10: |
| <article id="Human Practice" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> | | <article id="Human Practice" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> |
| <header class="page-header"> | | <header class="page-header"> |
− | <h1 id="model-introduction">Overview and Integrated</h1> | + | <h1 id="model-introduction">Overview</h1> |
| </header> | | </header> |
− | <h2>Overview</h2>
| |
| <p>First of all, we evaluated the possible impact of our work in practical production by visiting one of the most notable synthetic biology companies in china, Bluepha. According to their suggestions, we accomplished our project design. We | | <p>First of all, we evaluated the possible impact of our work in practical production by visiting one of the most notable synthetic biology companies in china, Bluepha. According to their suggestions, we accomplished our project design. We |
| then visited three experts, respectively majoring in biochemistry, microbiology and phycology, creating an interdisciplinary communication environment. Based on their feedback, we successfully designed a series of educational lectures | | then visited three experts, respectively majoring in biochemistry, microbiology and phycology, creating an interdisciplinary communication environment. Based on their feedback, we successfully designed a series of educational lectures |
| about synthetic biology for high school students. Furthermore, we successfully collaborated with OUC, UCAS, UESTC and took an active part the CCiC conference. To intuitively demonstrate the core idea of synthetic biology and inspire | | about synthetic biology for high school students. Furthermore, we successfully collaborated with OUC, UCAS, UESTC and took an active part the CCiC conference. To intuitively demonstrate the core idea of synthetic biology and inspire |
| people to participate in gene-designing process, we deigned the first electronic-display system of synthetic biology, e-SAM©, and we hope this device can facilitate future iGEM teams to promote their ideas to public.</p> | | people to participate in gene-designing process, we deigned the first electronic-display system of synthetic biology, e-SAM©, and we hope this device can facilitate future iGEM teams to promote their ideas to public.</p> |
| + | </article> |
| | | |
− | | + | <article id="Silver" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> |
− | <h2>Silver</h2> | + | <header class="page-header"> |
| + | <h1 id="model-introduction">Silver</h1> |
| + | </header> |
| <p>The problem of degradation always lies in industrial production, whereas the abuse of antibiotics has lead to the emerge of antibiotic-resistant superbugs. It's the researchers' responsibility to deal with this safety issues raised by | | <p>The problem of degradation always lies in industrial production, whereas the abuse of antibiotics has lead to the emerge of antibiotic-resistant superbugs. It's the researchers' responsibility to deal with this safety issues raised by |
| the interaction between the application and the human society. Our iGEM project aims at the application of self-screening advantageous mutant selection, which can provide a growth dominance to the strains with beneficial mutation. | | the interaction between the application and the human society. Our iGEM project aims at the application of self-screening advantageous mutant selection, which can provide a growth dominance to the strains with beneficial mutation. |
| As a result, we conducted an biosafety-investigation about the medical application of antibiotics in FuXing Hospital, Capital University. Besides, we participated in a series of academic conferences, during which we exchanged our ideas | | As a result, we conducted an biosafety-investigation about the medical application of antibiotics in FuXing Hospital, Capital University. Besides, we participated in a series of academic conferences, during which we exchanged our ideas |
| with other participants and sought out for chances of collaboration.</p> | | with other participants and sought out for chances of collaboration.</p> |
− | | + | <h3>Prof. Dr. Zhuxudong</h2> |
− | <h2>Gold</h2>
| + | |
− | <p>In order to assure the practicalities of our SAM project, we've contacted a lot of experts, companies in related fields to acquire information on the prospects, potentials and weakness of this technique. Throughout these interviews and
| + | |
− | investigation, we've developed a profound understanding on the interaction between our project and the society, which in turn has enlightened the further study. </p>
| + | |
− | | + | |
− | <h2>Public Engagement</h2>
| + | |
− | <p>During the summer vacation, our team members went to country schools in Ningxia and Jiangxi Province to promote the popular science of synthetic biology. Furthermore we successfully designed a series of educational lectures and open-laboratory-festival
| + | |
− | for high school students. As a team rooted in solidarity, we successfully collaborated with OUC, UCAS, UESTC, HBUT, ZJUT, HUST and took an active part the CCiC conference. Most importantly, we were the first iGEM team applying logical
| + | |
− | circuit to human practice. In order to intuitively demonstrate the core idea of synthetic biology and inspire people to participate in gene-designing process, we deigned e-SAM©, the first electronic-display system of synthetic biology
| + | |
− | based on SCM parts, and we drafted a detailed description of experiments that can be performed with it as well as suggestions for customers. We are convinced that e-SAM© system can greatly facilitate future iGEM teams to promote their
| + | |
− | ideas to public.</p>
| + | |
− | | + | |
− | <h2>Social Activities</h2>
| + | |
− | <p>Biological safety is one of the major issues of consideration since the very beginning of our project. But in practice, fuzzy expression is inevitable in legal language. Therefore, we established a collaborating program with ZJUT to produce
| + | |
− | a manifesto, calling for laws to regulate the use of antibiotics and biotechnology.</p>
| + | |
− | | + | |
− | <h2>Interviews</h2>
| + | |
− | <h3>Prof. Dr. Zhuxudong</h3>
| + | |
| <h4>Editor of Chinese Journal of Biotechnology</h4> | | <h4>Editor of Chinese Journal of Biotechnology</h4> |
| <h4>Mycological society of china</h4> | | <h4>Mycological society of china</h4> |
Line 72: |
Line 57: |
| | | |
| <h3>LooKChem®</h3> | | <h3>LooKChem®</h3> |
− | <p>About these questions, Dr. ? gave us two important information. The first is when it comes to the biological legalization, an automatic cell factory is forbidden to use antibiotics which is usual in laboratory work. As a result, they have | + | <p>About these questions, Dr. Peng gave us two important information. The first is when it comes to the biological legalization, an automatic cell factory is forbidden to use antibiotics which is usual in laboratory work. As a result, they have |
| to concentrate and separate the solution in order to sustain the recombination strains account for the majority of total strains. This is the central concern of our project. He also pointed out that the most common degradation happens | | to concentrate and separate the solution in order to sustain the recombination strains account for the majority of total strains. This is the central concern of our project. He also pointed out that the most common degradation happens |
| when plasmids unequally distribute in cell cycles to let normal bacteria with less burden replace the recombination strains and resulting in the declination of total production. </p> | | when plasmids unequally distribute in cell cycles to let normal bacteria with less burden replace the recombination strains and resulting in the declination of total production. </p> |
| + | </article> |
| | | |
− | <h3>Prof. Yang Dong</h3> | + | <article id="Gold" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> |
− | <h4>Chinese society of biochemistry and molecular biology</h4>
| + | <header class="page-header"> |
| + | <h1 id="model-introduction">Gold</h1> |
| + | </header> |
| + | <p>In order to assure the practicalities of our SAM project, we've contacted a lot of experts, companies in related fields to acquire information on the prospects, potentials and weakness of this technique. Throughout these interviews and |
| + | investigation, we've developed a profound understanding on the interaction between our project and the society, which in turn has enlightened the further study. </p> |
| + | |
| + | <div class="col-lg-6 col-md-3 col-sm-6 team-figure"> |
| + | <div class="pic" style="background-image: url('https://static.igem.org/mediawiki/2018/c/c6/T--BNU-China--yang_dong.jpeg');"> |
| + | </div> |
| + | </div> |
| + | |
| + | <div class="col-md-3 col-lg-6 col-sm-6 team-intro"> |
| + | <div class="self-introduction right"> |
| + | <h3>Prof. Yang Dong</h3> |
| + | <h4>Chinese society of biochemistry and molecular biology</h4> |
| <h4>Beijing normal university</h4> | | <h4>Beijing normal university</h4> |
| <p>After reading numerous papers,we came up with the first idea of self-control system consisting of a series of genes collaboration, and discussed with prof. Yang. In spite of her appreciation of the sophisticate network we designed, she | | <p>After reading numerous papers,we came up with the first idea of self-control system consisting of a series of genes collaboration, and discussed with prof. Yang. In spite of her appreciation of the sophisticate network we designed, she |
| regretfully denied its feasibility. Prof. Yang pointed out that a truly valuable plan for practical use must be concise because when we introduce heterologous genes, we add to more variables at the same time, which will greatly increase | | regretfully denied its feasibility. Prof. Yang pointed out that a truly valuable plan for practical use must be concise because when we introduce heterologous genes, we add to more variables at the same time, which will greatly increase |
| the probability of our potential failure. </p> | | the probability of our potential failure. </p> |
| + | </div> |
| + | </div> |
| + | |
| + | |
| <p>But during the discussion, we came to an agreement that fermentation incubator could be considered as a natural field of natural selectivity. In this theory, the core reason of strain degradation is the strain without recombination plasmids | | <p>But during the discussion, we came to an agreement that fermentation incubator could be considered as a natural field of natural selectivity. In this theory, the core reason of strain degradation is the strain without recombination plasmids |
| or the mutated strains could get rid of the burden of heterologous protein while maintaining the same ability to absorb nutrition and growth. As a result, the recombination strains were gradually eliminated in this competition.</p> | | or the mutated strains could get rid of the burden of heterologous protein while maintaining the same ability to absorb nutrition and growth. As a result, the recombination strains were gradually eliminated in this competition.</p> |
Line 88: |
Line 92: |
| <p>After consulting to the papers, we decided to use TGATG linkage between two genes as our final project.</p> | | <p>After consulting to the papers, we decided to use TGATG linkage between two genes as our final project.</p> |
| | | |
− | <h2>Bluepha</h2> | + | |
− | <h3>Dr. Li Teng, CEO</h3> | + | |
− | <p>Dr. Li suggested two potential areas about the application of our project. The first is an automatic cell factory that can select beneficial mutations. He also suggested engineering regulatory parts to make the self-screening system capable
| + | <h3>Bluepha</h3> |
− | of applying to different substrate and desired products.</p>
| + | <figure class="text-center"> |
− | <p>We discussed with chief information official Dr. Li model analyzing. He suggested that we can competition model for prediction of sequence candidate performance during screening. The talk inspired us a lot for how to convert our project
| + | <img src="https://static.igem.org/mediawiki/2018/e/e5/T--BNU-China--bluepha.png" alt="this is a pic"> |
− | into an application, especially in modeling and designing.</p>
| + | </figure> |
| + | |
| + | |
| + | <div class="col-md-3 col-lg-6 col-sm-6 team-intro"> |
| + | <div class="self-introduction right"> |
| + | <h3>Dr. Li Teng, CEO</h3> |
| + | <p>Dr. Li suggested two potential areas about the application of our project. The first is an automatic cell factory that can select beneficial mutations. He also suggested engineering regulatory parts to make the self-screening system capable of applying to different substrate and desired products.</p> |
| + | <p>We discussed with chief information official Dr. Li model analyzing. He suggested that we can competition model for prediction of sequence candidate performance during screening. The talk inspired us a lot for how to convert our project into an application, especially in modeling and designing.</p> |
| + | </div> |
| + | </div> |
| + | <div class="col-lg-6 col-md-3 col-sm-6 team-figure"> |
| + | <div class="pic" style="background-image: url('https://static.igem.org/mediawiki/2018/e/ef/T--BNU-China--bluepha2.jpeg');"> |
| + | </div> |
| + | </div> |
| + | |
| + | |
| + | |
| + | |
| + | </article> |
| | | |
| + | <article id="Social Activities" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> |
| + | <header class="page-header"> |
| + | <h1 id="model-introduction">Social Activities</h1> |
| + | </header> |
| + | <p>Biological safety is one of the major issues of consideration since the very beginning of our project. But in practice, fuzzy expression is inevitable in legal language. Therefore, we established a collaborating program with ZJUT to produce a manifesto, calling for laws to regulate the use of antibiotics and biotechnology.</p> |
| <h3>Prof. Ma Jianyin</h3> | | <h3>Prof. Ma Jianyin</h3> |
| <h4>National Academy of Foreign Legal History Study</h4> | | <h4>National Academy of Foreign Legal History Study</h4> |
Line 103: |
Line 130: |
| of popularizing scientific principles and promoting the legislation about life science. In addition, with the help of social media, researchers can lead discussions, clarify research topics, and help to determine moral values. Prof. | | of popularizing scientific principles and promoting the legislation about life science. In addition, with the help of social media, researchers can lead discussions, clarify research topics, and help to determine moral values. Prof. |
| Ma set a high value on our manifesto calling for laws to regulate the use of antibiotics and biotechnology and encouraged us to doing research for improving the general life quality of mankind.</p> | | Ma set a high value on our manifesto calling for laws to regulate the use of antibiotics and biotechnology and encouraged us to doing research for improving the general life quality of mankind.</p> |
− | </article>
| + | <a href="#" style = "font-family: Helvetica;">click here to get the full text of legislation manifesto</a> |
| + | </article> |
| + | |
| + | |
| <article id="Public" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> | | <article id="Public" class="col-lg-10 col-lg-offset-1 col-md-12 col-md-offset-0 col-sm-offset-0 col-sm-12"> |
| <header class="page-header"> | | <header class="page-header"> |
| <h1 id="model-introduction">public engagement</h1> | | <h1 id="model-introduction">public engagement</h1> |
| </header> | | </header> |
| + | <p>During the summer vacation, our team members went to country schools in Ningxia and Jiangxi Province to promote the popular science of synthetic biology. Furthermore we successfully designed a series of educational lectures and open-laboratory-festival |
| + | for high school students. As a team rooted in solidarity, we successfully collaborated with OUC, UCAS, UESTC, HBUT, ZJUT, HUST and took an active part the CCiC conference. Most importantly, we were the first iGEM team applying logical |
| + | circuit to human practice. In order to intuitively demonstrate the core idea of synthetic biology and inspire people to participate in gene-designing process, we deigned e-SAM©, the first electronic-display system of synthetic biology |
| + | based on SCM parts, and we drafted a detailed description of experiments that can be performed with it as well as suggestions for customers. We are convinced that e-SAM© system can greatly facilitate future iGEM teams to promote their |
| + | ideas to public.</p> |
| <h2>Introductory courses</h2> | | <h2>Introductory courses</h2> |
| <p>Since we came from a special college for teachers, we wanted our goals for the event to inspire more people to get involved in science. The head of the program emphasized that we should try to get students interested in the field of molecular biology and participating in research in college. Every summer, Beijing normal university hosts an education campaign for bachelors of all major to learn iGEM and do basic biological experiments, in order to arise their curiosity of synthetic biology and life science. The BNU-China iGEM teams always collaborate with the School of Education in the past to do teaching activities with students, so we launched a series of introductory course for new students, and invited them to visit our lab.</p> | | <p>Since we came from a special college for teachers, we wanted our goals for the event to inspire more people to get involved in science. The head of the program emphasized that we should try to get students interested in the field of molecular biology and participating in research in college. Every summer, Beijing normal university hosts an education campaign for bachelors of all major to learn iGEM and do basic biological experiments, in order to arise their curiosity of synthetic biology and life science. The BNU-China iGEM teams always collaborate with the School of Education in the past to do teaching activities with students, so we launched a series of introductory course for new students, and invited them to visit our lab.</p> |
| <p>The courses include 4-week training of basic theory, two molecular biology experiments, and a mini-iGEM meeting. To guarantee the quality of these courses, we chose four of our best teammates and rehearsed privately for several times. Moreover, we made thorough plans and got the full rights from both college leaders and former iGEMers, each of whom assigned a team of freshers matched according to students’ speciality. The mentors monitored the study pace of each student by weekly meetings and students responded to learn the required materials. The courses were liked by most of apprentices. More importantly, we had a real bonus that we met two excellent students with both talent and enthusiasm, and they were absorbed in our iGEM team to make greater contribution.</p> | | <p>The courses include 4-week training of basic theory, two molecular biology experiments, and a mini-iGEM meeting. To guarantee the quality of these courses, we chose four of our best teammates and rehearsed privately for several times. Moreover, we made thorough plans and got the full rights from both college leaders and former iGEMers, each of whom assigned a team of freshers matched according to students’ speciality. The mentors monitored the study pace of each student by weekly meetings and students responded to learn the required materials. The courses were liked by most of apprentices. More importantly, we had a real bonus that we met two excellent students with both talent and enthusiasm, and they were absorbed in our iGEM team to make greater contribution.</p> |
− | <h2>Silver</h2> | + | |
− | <p>The problem of degradation always lies in industrial production, whereas the abuse of antibiotics has lead to the emerge of antibiotic-resistant superbugs. It's the researchers' responsibility to deal with this safety issues raised by
| + | |
− | the interaction between the application and the human society. Our iGEM project aims at the application of self-screening advantageous mutant selection, which can provide a growth dominance to the strains with beneficial mutation.
| + | |
− | As a result, we conducted an biosafety-investigation about the medical application of antibiotics in FuXing Hospital, Capital University. Besides, we participated in a series of academic conferences, during which we exchanged our ideas
| + | |
− | with other participants and sought out for chances of collaboration.</p>
| + | |
− | | + | |
| <h2>Voluntary</h2> | | <h2>Voluntary</h2> |
| <p>Frankly speaking, popular science about biology is quite inadequate, causing many students in rural areas unable to scratch the surface of biology until senior high. As a result, during the summer vacation, our team members went to three country schools in Jiangxi and Ningxia Province for volunteer work and brought biology to younger students.</p> | | <p>Frankly speaking, popular science about biology is quite inadequate, causing many students in rural areas unable to scratch the surface of biology until senior high. As a result, during the summer vacation, our team members went to three country schools in Jiangxi and Ningxia Province for volunteer work and brought biology to younger students.</p> |
| <p>BNU-China organized a seminar class and shared anecdotes about biotechnology with children from several villages. In the active class, team members held a heated discussion involving transgenosis and environmental protection that people concerned and we got established a long-term friendly relation of cooperation with OUC-China, who helped us with the comic book about synthetic biology. The book exhibited the complex biology model and principle with funny comics, making it more easier for students initial contact. Besides daily activities, we also conducted an interview about their fancy ways of education. Most students responded that they were looking forward to participating in scientific experiments, but had laboured under the disadvantage of not having enough equipment. Their words went directly to the heart, finding their support in the understanding. Grown up in cities, we had no idea of strong thirst for knowledge of rural children. From then on, we were deeply determined to create a revolutionary new way of science popularization, ameliorating the poor condition and offering these lovely students opportunities to a better future.</p> | | <p>BNU-China organized a seminar class and shared anecdotes about biotechnology with children from several villages. In the active class, team members held a heated discussion involving transgenosis and environmental protection that people concerned and we got established a long-term friendly relation of cooperation with OUC-China, who helped us with the comic book about synthetic biology. The book exhibited the complex biology model and principle with funny comics, making it more easier for students initial contact. Besides daily activities, we also conducted an interview about their fancy ways of education. Most students responded that they were looking forward to participating in scientific experiments, but had laboured under the disadvantage of not having enough equipment. Their words went directly to the heart, finding their support in the understanding. Grown up in cities, we had no idea of strong thirst for knowledge of rural children. From then on, we were deeply determined to create a revolutionary new way of science popularization, ameliorating the poor condition and offering these lovely students opportunities to a better future.</p> |
| + | <h2>e-SAM</h2> |
| <p>Having been back to our laboratory, we held a series of conferences, coming up with ideas on how to popularize synthetic biology intended for demonstrations at low cost.At the beginning, we planned to help students to get a deeper understanding of synthetic biology in the means of lecture, but soon changed our mind for the teaching practice with local high school students who reported that this form would be boring for the public. Then we thought of, a mimic electrocircuitt relying on the gene pathway would offer a great advantage of viewable and intuitive understanding of the core idea of synthetic biology. And it can inspire people to participate in gene-designing process. </p> | | <p>Having been back to our laboratory, we held a series of conferences, coming up with ideas on how to popularize synthetic biology intended for demonstrations at low cost.At the beginning, we planned to help students to get a deeper understanding of synthetic biology in the means of lecture, but soon changed our mind for the teaching practice with local high school students who reported that this form would be boring for the public. Then we thought of, a mimic electrocircuitt relying on the gene pathway would offer a great advantage of viewable and intuitive understanding of the core idea of synthetic biology. And it can inspire people to participate in gene-designing process. </p> |
| <p>As a result, we used e-SAM© system, an ideal analog model to expound the definition of synthetic biology, applying engineering structures to build artificial biological systems for research, engineering and medical applications. We also drafted a detailed description of experiments that can be performed with e-SAM© system as well as suggestions for customers. The one-to-one match between e-SAM© system and the biology parts are shown below.</p> | | <p>As a result, we used e-SAM© system, an ideal analog model to expound the definition of synthetic biology, applying engineering structures to build artificial biological systems for research, engineering and medical applications. We also drafted a detailed description of experiments that can be performed with e-SAM© system as well as suggestions for customers. The one-to-one match between e-SAM© system and the biology parts are shown below.</p> |
Line 151: |
Line 182: |
| <p>With the help of e-SAM system, we can demonstrate gene-expression with modifying the switches.</p> | | <p>With the help of e-SAM system, we can demonstrate gene-expression with modifying the switches.</p> |
| | | |
− | <h2>Visit and feedback from high school teachers</h2> | + | <h3>Visit and feedback from high school teachers</h3> |
| <p>In September, the team welcomed students from several high schools nearby and freshers in BNU, who had interests in biology and the willing to introduce our model to their friends. A few days later we received encouraging students’ responses from SanFan and other departments of BNU, who gave a high appraisal to our engineering model and told us to provide them with a more detailed proposal as soon as we would have it ready.</p> | | <p>In September, the team welcomed students from several high schools nearby and freshers in BNU, who had interests in biology and the willing to introduce our model to their friends. A few days later we received encouraging students’ responses from SanFan and other departments of BNU, who gave a high appraisal to our engineering model and told us to provide them with a more detailed proposal as soon as we would have it ready.</p> |
| <p>As a result, in October, several high school teachers from SanFan came to BNU to meet with our team to discuss the possible integration of our e-SAM system in their high school's biology curriculum. We provided them a live demonstration of how the e-SAM system works and we discussed the impact it would have on the high school courses of normal students heatedly. The teachers responded to us that one of the most disturbing questions about science curriculum was the lack of facilities. Many essential science instruments such as centrifuge can be too dangerous and too expensive for high school provide. They e-SAM system can make great contribution at teaching-cost reduction, worthy to spread across high school education.</p> | | <p>As a result, in October, several high school teachers from SanFan came to BNU to meet with our team to discuss the possible integration of our e-SAM system in their high school's biology curriculum. We provided them a live demonstration of how the e-SAM system works and we discussed the impact it would have on the high school courses of normal students heatedly. The teachers responded to us that one of the most disturbing questions about science curriculum was the lack of facilities. Many essential science instruments such as centrifuge can be too dangerous and too expensive for high school provide. They e-SAM system can make great contribution at teaching-cost reduction, worthy to spread across high school education.</p> |
| + | |
| + | <a href="https://2018.igem.org/Team:BNU-China/Protocol" style = "font-family: Helvetica;">Click here to get the detailed e-SAM protocol</a> |
| </article> | | </article> |
| </div> | | </div> |