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− | <img class="banner-img" src="https://static.igem.org/mediawiki/2018/ | + | <img class="banner-img" src="https://static.igem.org/mediawiki/2018/1/18/T--Pasteur_Paris--Banner_Membrane2.jpg"> |
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<div class="block title" style="margin-top: 35px;"><h3 style="text-align: left;" id="Gold">Gold-coated membranes</h3></div> | <div class="block title" style="margin-top: 35px;"><h3 style="text-align: left;" id="Gold">Gold-coated membranes</h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>Sterlitech Polycarbonate Gold-Coated Membrane Filters | + | <p>Sterlitech Polycarbonate Gold-Coated Membrane Filters represented one of the types of membranes we tested. The pores have a diameter of 0.4 micrometer, which is small enough to confine <i> Escherichia coli </i> bacteria, which diameter and size are respectively about 1 micrometer and 2 micrometers. These membranes were relatively easy to manipulate with a forceps because of their high flexibility. Scanning electron microscopy by courtesy of Bruno Bresson, Sciences et Ingénierie de la Matière Molle |
+ | Physico-chimie des Polymères et Milieux Dispersés).</p> | ||
</div> | </div> | ||
<div class="block half"> | <div class="block half"> | ||
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<img src="https://static.igem.org/mediawiki/2018/1/15/T--Pasteur_Paris--Gold-membrane-micro.jpg"> | <img src="https://static.igem.org/mediawiki/2018/1/15/T--Pasteur_Paris--Gold-membrane-micro.jpg"> | ||
− | <div class="legend"><b>Figure 3: </b>Gold-Coated Membrane | + | <div class="legend"><b>Figure 3: </b>Gold-Coated Membrane </div> |
</div> | </div> | ||
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<div class="block half"> | <div class="block half"> | ||
<img src="https://static.igem.org/mediawiki/2018/8/83/T--Pasteur_Paris--Alumina-oxide-membrane.jpg"> | <img src="https://static.igem.org/mediawiki/2018/8/83/T--Pasteur_Paris--Alumina-oxide-membrane.jpg"> | ||
− | <div class="legend"><b>Figure 4: </b> | + | <div class="legend"><b>Figure 4: </b>Alumina Oxyde Membrane in grey</div> |
</div> | </div> | ||
<div class="block half"> | <div class="block half"> | ||
<img src="https://static.igem.org/mediawiki/2018/f/f7/T--Pasteur_Paris--Alumina-oxide-membrane-micro.jpg"> | <img src="https://static.igem.org/mediawiki/2018/f/f7/T--Pasteur_Paris--Alumina-oxide-membrane-micro.jpg"> | ||
− | <div class="legend"><b>Figure 5: </b> | + | <div class="legend"><b>Figure 5: </b>Alumina Oxyde Membrane (electron microscope)</div> |
</div> | </div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>For PEDOT:PSS, an aqueous solution of PEDOT:PSS was prepared | + | <p>For PEDOT:PSS, an aqueous solution of PEDOT:PSS was prepared<sup>[1]</sup> and alumina oxide membranes were dipped for 24 hours in this solution. Electron microscopy of the membranes before and after the experiment showed the deposit of a substance on their surface in a cluster-like fashion, indicating an incomplete coating.</p> |
</div> | </div> | ||
<div class="block half"> | <div class="block half"> | ||
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</div> | </div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>Vapor-phase polymerization of PEDOT:Cl and PEDOT:Ts | + | <p>Vapor-phase polymerization of PEDOT:Cl and PEDOT:Ts<sup>[2]</sup> also induced a change in the surface of the membranes, in a more uniform way. The surface of the membrane seems to have thickened, but without blocking the pores either, which makes for a high quality homogenous coating.</p> |
</div> | </div> | ||
<div class="block half"> | <div class="block half"> | ||
<img src="https://static.igem.org/mediawiki/2018/5/5c/T--Pasteur_Paris--PEDOT-membrane.jpg"> | <img src="https://static.igem.org/mediawiki/2018/5/5c/T--Pasteur_Paris--PEDOT-membrane.jpg"> | ||
− | <div class="legend"><b>Figure 8: </b>PEDOT: | + | <div class="legend"><b>Figure 8: </b>PEDOT:Ts (left) / PEDOT:Cl (right) - coated membranes</div> |
</div> | </div> | ||
<div class="block half"> | <div class="block half"> | ||
<img src="https://static.igem.org/mediawiki/2018/0/05/T--Pasteur_Paris--PEDOT-membrane-micro.jpg"> | <img src="https://static.igem.org/mediawiki/2018/0/05/T--Pasteur_Paris--PEDOT-membrane-micro.jpg"> | ||
− | <div class="legend"><b>Figure 9: </b>PEDOT: | + | <div class="legend"><b>Figure 9: </b>PEDOT:Cl-coated membrane (electron microscope)</div> |
</div> | </div> | ||
+ | <div class="block title"><h3 style="text-align: left;" id="Confinement">Confinement</h3></div> | ||
+ | <div class="block full"> | ||
+ | <p>The first issue to tackle was the confinement of the bacteria. For this purpose, we used microfluidic chips. Microfluidic chips are patterns molded in PDMS (polydimethylsiloxane), which can be used to design tiny circuits for liquid flow. We used Institut Curie's design of a microfluidic chip, which has 2 chambers connected by microchannels of 5 micrometers width and 2 micrometers height. We enhanced the design by integrating a membrane filter (gold-coated) to prevent bacteria to pass from one chamber to another. As this technique was quite improvised and new, we didn't had access to the needed equipement for better precision work, leading to many chips being leaky. We managed to conduct an experiment were the chip did not leak and the filter succesfully retained the bacteria introduced in the chip. </p> | ||
+ | </div> | ||
− | |||
<div class="block full"> | <div class="block full"> | ||
− | < | + | <img src="https://static.igem.org/mediawiki/2018/f/fd/T--Pasteur_Paris--Test-Filtre-2.jpg"> |
+ | <div class="legend"><b>Figure 10: </b>Membrane filter retaining bacteria on the left (PDMS impurities on the right)</div> | ||
</div> | </div> | ||
+ | |||
+ | <div class="block separator-mark"></div> | ||
<div class="block title"><h3 style="text-align: left;" id="Conductivity">Conductivity</h3></div> | <div class="block title"><h3 style="text-align: left;" id="Conductivity">Conductivity</h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>The second criterion for a fully functional interface is its ability to conduct a neuron’s influx. Thus, conductivity measurements were made for | + | <p>The second criterion for a fully functional interface is its ability to conduct a neuron’s influx. Thus, conductivity measurements were made for different types of membranes. Results indicated that bare alumina oxide and PEDOT:PSS-coated membranes showed similar conductivities, indicating the incomplete coating of PEDOT:PSS on alumina oxide membranes. On the opposite, PEDOT:Cl and PEDOT:Ts exhibit on average better conductivities, but in the same time, the coating of these membranes revealed by electron microscopy seemed to have covered the alumina oxide membranes in a more uniform way, ensuring enhanced conductive capabilities . These results can be criticized because of the high deviation and because the membranes conductivity was measured after several biofilms were grown on them, which may have affected the measurements. </p> |
+ | |||
+ | |||
+ | <div class="block full"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/5/50/T--Pasteur_Paris--Membrane-Conductivity.jpg" style="width:500px"> | ||
+ | <div class="legend"><b>Figure 11: </b>Membrane conductivity</div> | ||
</div> | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
<div class="block separator-mark"></div> | <div class="block separator-mark"></div> | ||
+ | |||
+ | <div class="block title"><h3 style="text-align: left;" id="Biocompatibility">Biocompatibility</h3></div> | ||
+ | <div class="block full"> | ||
+ | <p> One last important property of the membranes is the capability of bacteria to form a biofilm on them, as in our prosthesis system, the membrane is going to be directly in contact with the genetically modified biofilm, as well as the human body. We conducted multiple series of biofilm culture on special culture wells designed by our team. Biofilm growth was measured for each type of membrane.</p> | ||
+ | </div> | ||
+ | <div class="block full"> | ||
+ | <img src="https://static.igem.org/mediawiki/2018/8/84/T--Pasteur_Paris--Biofilm-Growth.jpg" style="width:500px"> | ||
+ | <div class="legend"><b>Figure 12: </b>Biofilm growth</div> | ||
+ | </div> | ||
+ | |||
+ | <div class="block separator-mark"></div> | ||
+ | |||
<div class="block title"><h1>CONCLUSION</h1></div> | <div class="block title"><h1>CONCLUSION</h1></div> | ||
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<div class="block title"><h1>REFERENCES</h1></div> | <div class="block title"><h1>REFERENCES</h1></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <ul style="text-align: left;"> | + | <ul style="text-align: left;list-style: disc;"> |
<li style="list-style-type: decimal;">Jikui Wang, Guofeng Cai, Xudong Zhu, Xiaping Zhou, Oxidative Chemical Polymerization of 3,4-Ethylenedioxythiophene and its Applications in Antistatic coatings, Journal of Applied Polymer Science, 2012, Vol. 124, 109-115 .<br><br></li> | <li style="list-style-type: decimal;">Jikui Wang, Guofeng Cai, Xudong Zhu, Xiaping Zhou, Oxidative Chemical Polymerization of 3,4-Ethylenedioxythiophene and its Applications in Antistatic coatings, Journal of Applied Polymer Science, 2012, Vol. 124, 109-115 .<br><br></li> | ||
<li style="list-style-type: decimal;">Alexis E. Abelow, Kristin M. Persson, Edwin W.H. Jager, Magnus Berggren, Ilya Zharov, Electroresponsive Nanoporous Membranes by Coating Anodized Alumina with Poly(3,4ethylenedioxythiophene) and Polypyrrole. 2014, 299, 190-197.<br><br></li> | <li style="list-style-type: decimal;">Alexis E. Abelow, Kristin M. Persson, Edwin W.H. Jager, Magnus Berggren, Ilya Zharov, Electroresponsive Nanoporous Membranes by Coating Anodized Alumina with Poly(3,4ethylenedioxythiophene) and Polypyrrole. 2014, 299, 190-197.<br><br></li> | ||
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<div class="block full"> | <div class="block full"> | ||
<p>As seen in the other parts of this wiki, we chose to use a nanoporous membrane in our device. The first goal of the membrane was to confine our biofilm, so it does not escape the prosthesis. Moreover, we also used our membrane as a conductive electrode. This solution was interesting since we didn’t have enough time to develop an entire electrical device which collects and treat the signal of the nerves. However, we know we still need to improve our interface if we want the patient to fully control his prosthesis. That is why we decided to look at what is already made in this field. So, first, we detailed how it is possible to model the electrical characteristics of a nerve. Then, we searched for information on electrodes and signal treatment. </p> | <p>As seen in the other parts of this wiki, we chose to use a nanoporous membrane in our device. The first goal of the membrane was to confine our biofilm, so it does not escape the prosthesis. Moreover, we also used our membrane as a conductive electrode. This solution was interesting since we didn’t have enough time to develop an entire electrical device which collects and treat the signal of the nerves. However, we know we still need to improve our interface if we want the patient to fully control his prosthesis. That is why we decided to look at what is already made in this field. So, first, we detailed how it is possible to model the electrical characteristics of a nerve. Then, we searched for information on electrodes and signal treatment. </p> | ||
− | <p><i>This section is | + | <p><i>This section is principally based on the thesis of Olivier Rossel: Dispositifs de measure et d’interprétation de l’activité d’un nerf. Electronique. Université Montpellier II - Sciences et Techniques du Languedoc, 2012. Français. </i></p> |
</div> | </div> | ||
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<div class="block title" style="margin-top: 35px;"><h3 style="text-align: left;" id="Nerve">Gold-coated membranes</h3></div> | <div class="block title" style="margin-top: 35px;"><h3 style="text-align: left;" id="Nerve">Gold-coated membranes</h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>One of the goals of NeuronArch is to use or even develop a neural signal collection solution that is both non-invasive for the nerve and highly selective.In this context, we seek to develop an innovative architecture to significantly improve the selectivity of extraneural electrodes. In order to be able to develop such a solution, we must be able to estimate the electrical potential created on the surface of the nerve by the propagation of transmembrane currents at the level of the axons.</p> | + | <p>One of the goals of NeuronArch is to use or even develop a neural signal collection solution that is both non-invasive for the nerve and highly selective. In this context, we seek to develop an innovative architecture to significantly improve the selectivity of extraneural electrodes. In order to be able to develop such a solution, we must be able to estimate the electrical potential created on the surface of the nerve by the propagation of transmembrane currents at the level of the axons.</p> |
− | <p>For this study, we are only interested in | + | <p>For this study, we are only interested in myelinated axons present in the peripheral nervous system. Models that represent the extracellular voltage produced by the passage of an action potential for this type of fiber already exist. The evolution of the extracellular voltage in the space separating two nodes of Ranvier can be described by these models.</p> |
− | <p>First, we are going to detail the physiological characteristics of the human nervous system. Then, we are going to | + | <p>First, we are going to detail the physiological characteristics of the human nervous system. Then, we are going to model the electrical currents of an axon. Finally, we will estimate the influence of such currents at the surface of a nerve and model an entire nerve. </p> |
</div> | </div> | ||
<div class="block title"><h1>I. physiological characteristics of the human nervous system<sup>[1]</sup></h1></div> | <div class="block title"><h1>I. physiological characteristics of the human nervous system<sup>[1]</sup></h1></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>The nervous system is divided | + | <p>The nervous system is divided into two different parts: the central nervous system (CNS) and the peripheral nervous system (PNS). We will focus on the peripheral nervous system as it transports the information between the rest of the body and the central nervous system. Moreover, it includes the somatic nervous system which consists of afferent nerves, also called sensory nerves, and efferent nerves also called motor nerves. Afferent nerves are responsible for relaying sensation from the body to the central nervous system; efferent nerves are responsible for sending out commands from the CNS to the body, stimulating muscle contraction; they include all the non-sensory neurons connected with skeletal muscles and skin. Generally, the fibers of the somatic nervous system have an insulating sheath called a myelin sheath.</p> |
− | <img src="https://static.igem.org/mediawiki/2018/ | + | |
− | <div class="legend"><b>Figure 1: </b>Structure of nerves<sup>[2]</sup></div> | + | <img src="https://static.igem.org/mediawiki/2018/2/27/T--Pasteur_Paris--InterfaceNerveFigure1_1.jpg" style="width:300px"> |
− | <p>Nerve fibers, consisting of axons and associated Schwann cells are grouped together in fascicles, sheathed by the perineurium. | + | <div class="legend"><b>Figure 1: </b>Structure of nerves, based on<sup>[2]</sup></div> |
− | <p>The fascicles are | + | <p>Nerve fibers, consisting of axons and associated Schwann cells are grouped together in fascicles, sheathed by the perineurium (Cf. Figure 1). It is composed of layers of perineural cells. About half of the fascicular surface is occupied by the fibers, the rest is composed of the endoneurium which segments the inside of the fascicle into several groups of nerve fibers which will then form new fascicles.</p> |
− | <p>The fascicular architecture is ordered only distally, close to the emergence of a nerve trunk.Going up to the proximal part, | + | <p>The fascicles are contained in an isolated connective tissue called the epineurium that contains fibroblasts, collagen, and fat in different proportions. This envelope allows the fixation of the nerve on the surrounding structures. It contains the lymphatic and vascular network which crosses the perineurium to communicate with the network of arterioles and venula of the endoneurium. The epineurium constitutes 30 to 70% of the total area of a nerve.</p> |
+ | <p>The fascicular architecture is ordered only distally, close to the emergence of a nerve trunk. Going up to the proximal part, fascicles divide and some fibers change their fascicles, the size of the fascicles decreases and their number increases. An orderly organization relative to the target organ is found only in the final branches that innervate a muscle, a group of muscles or sensory receptors.</p> | ||
</div> | </div> | ||
<div class="block title"><h1>II. Propagation of nerve impulses:</h1></div> | <div class="block title"><h1>II. Propagation of nerve impulses:</h1></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>The nerve impulse is initiated by action potentials that are created by successive openings and closings of the ion channels. The membrane current due to ionic flux creates an electric field in the nerve that produces a potential difference outside the nerve called extracellular voltage. It is this extracellular voltage that a measuring electrode will perceive. For a myelinated axon these ionic currents appear only at the nodes of Ranvier.</p> | + | <p>The nerve impulse is initiated by action potentials that are created by successive openings and closings of the ion channels. The membrane current due to ionic flux creates an electric field in the nerve that produces a potential difference outside the nerve called extracellular voltage. It is this extracellular voltage that a measuring electrode will perceive. For a myelinated axon, these ionic currents appear only at the nodes of Ranvier.</p> |
</div> | </div> | ||
<div class="block title"><h1>III. Modelisation of the currents of a axon’s membrane</h1></div> | <div class="block title"><h1>III. Modelisation of the currents of a axon’s membrane</h1></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>Although our objective is the | + | <p>Although our objective is the measurement of the extracellular action potential, it is necessary to know the currents produced at the level of an axon. </p> |
<p>From an electrical point of view, the myelin sheath of the axon acts as an insulator, preventing the appearance of transmembrane currents elsewhere than at Ranvier's nodes. In fact, seen from the outside of the axon, the action potential seems to jump from one node of Ranvier to the other. Let us now consider how to model this propagation, in order to extract the transmembrane currents at the nodes of Ranvier.</p> | <p>From an electrical point of view, the myelin sheath of the axon acts as an insulator, preventing the appearance of transmembrane currents elsewhere than at Ranvier's nodes. In fact, seen from the outside of the axon, the action potential seems to jump from one node of Ranvier to the other. Let us now consider how to model this propagation, in order to extract the transmembrane currents at the nodes of Ranvier.</p> | ||
</div> | </div> | ||
<div class="block title"><h3 style="text-align: left;">1. Electric model of an axon</h3></div> | <div class="block title"><h3 style="text-align: left;">1. Electric model of an axon</h3></div> | ||
− | <div class="block full"><p>We used the model of Hodgkin-Huxley to describe the flow of electric current through the surface membrane of a giant nerve fiber. The electrical | + | <div class="block full"><p>We used the model of Hodgkin-Huxley to describe the flow of electric current through the surface membrane of a giant nerve fiber. The electrical behavior of the membrane may be represented by the network shown in Figure 2. Current can be carried through the membrane either by charging the membrane capacity or by movement of ions through the resistance in parallel with the capacity. The influence of membrane potential on permeability can be summarized by stating: first, that depolarization causes a transient increase in sodium conductance and a slower, but maintained, increase in potassium conductance; secondly, that these changes are graded and that they can be reversed by repolarizing the membrane. </p></div> |
<img src="https://static.igem.org/mediawiki/2018/4/4c/T--Pasteur_Paris--InterfaceNerveFigure2.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/4/4c/T--Pasteur_Paris--InterfaceNerveFigure2.jpg" style="width:300px"> | ||
<div class="legend"><b>Figure 2: </b>Electrical circuit representing membrane. RNa = 1/g<sub>Na</sub>; R<sub>k</sub> = 1/g<sub>k</sub>; R<sub>l</sub> = 1/ḡ<sub>l</sub>. R<sub>Na</sub> and R<sub>k</sub> vary with time and membrane potential; the other components are constant.<sup>[3]</sup></div> | <div class="legend"><b>Figure 2: </b>Electrical circuit representing membrane. RNa = 1/g<sub>Na</sub>; R<sub>k</sub> = 1/g<sub>k</sub>; R<sub>l</sub> = 1/ḡ<sub>l</sub>. R<sub>Na</sub> and R<sub>k</sub> vary with time and membrane potential; the other components are constant.<sup>[3]</sup></div> | ||
− | <p>Thanks to this model, we are able to determine the evolution of the potential | + | <p>Thanks to this model, we are able to determine the evolution of the membrane’s potential (V), ionic current (J<sub>i</sub>) and capacitive (J<sub>CM</sub>) densities as a function of time (Cf. Figure 3).</p> |
<img src="https://static.igem.org/mediawiki/2018/e/ef/T--Pasteur_Paris--InterfaceNerveFigure3.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/e/ef/T--Pasteur_Paris--InterfaceNerveFigure3.jpg" style="width:300px"> | ||
<div class="legend"><b>Figure 3 </b>: Components of membrane current during propagated action potential. A, membrane potential. B, ionic current density (I<sub>i</sub>), capacity current density and total membrane current density I. C, ionic current density (I<sub>i</sub>), sodium current density (I<sub>Na</sub>) and potassium current density (I<sub>K</sub>).<sup>[3]</sup></div> | <div class="legend"><b>Figure 3 </b>: Components of membrane current during propagated action potential. A, membrane potential. B, ionic current density (I<sub>i</sub>), capacity current density and total membrane current density I. C, ionic current density (I<sub>i</sub>), sodium current density (I<sub>Na</sub>) and potassium current density (I<sub>K</sub>).<sup>[3]</sup></div> | ||
<div class="block title"><h3 style="text-align: left;">2. Simulation of the transmembrane nodal currents</h3></div> | <div class="block title"><h3 style="text-align: left;">2. Simulation of the transmembrane nodal currents</h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>It is possible to implement this model in the NEURON software (http://www.neuron.yale.edu/neuron/) to be able to simulate | + | <p>It is possible to implement this model in the NEURON software (http://www.neuron.yale.edu/neuron/) to be able to simulate transmembrane nodal currents (Cf. Figure 4). This software calculates the density of the currents presented previously.</p> |
<img src="https://static.igem.org/mediawiki/2018/b/b6/T--Pasteur_Paris--InterfaceNerveFigure4.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/b/b6/T--Pasteur_Paris--InterfaceNerveFigure4.jpg" style="width:300px"> | ||
<div class="legend"><b>Figure 4: </b>Result of the NEURON simulation of the electrical activity (evolution as a function of the time of the transmembrane current) of a Ranvier node of a typical axon of 8.7 <FONT face="Raleway">μ</FONT>m diameter.<sup>[4]</sup></div> | <div class="legend"><b>Figure 4: </b>Result of the NEURON simulation of the electrical activity (evolution as a function of the time of the transmembrane current) of a Ranvier node of a typical axon of 8.7 <FONT face="Raleway">μ</FONT>m diameter.<sup>[4]</sup></div> | ||
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<div class="block title"><h3 style="text-align: left;">1. Introduction </h3></div> | <div class="block title"><h3 style="text-align: left;">1. Introduction </h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>The purpose of this part is to know the potential “seen” by an electrode wrapped around the nerve. For this we will study the extracellular potential at the surface of the nerve by considering an axon parallel to the longitudinal | + | <p>The purpose of this part is to know the potential “seen” by an electrode wrapped around the nerve. For this, we will study the extracellular potential at the surface of the nerve by considering an axon parallel to the longitudinal axis of the nerve. Each Ranvier node is considered as a point current source. To estimate the potential at a point M at the periphery of the nerve, it is necessary to determine a transfer function linking this potential to each of the transmembrane currents of the axon. The simulation of the membrane current of the axone we developed previously is used as the input of the nerve model.</p> |
</div> | </div> | ||
<div class="block title"><h3 style="text-align: left;">2. Medium transfer function </h3></div> | <div class="block title"><h3 style="text-align: left;">2. Medium transfer function </h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>J. H. Meier and al. developed a nonhomogeneous and anisotropic model of a nerve [6]. We consider a cylindrical nerve of radius a and an axon at a distance r from the axis of the nerve (figure 6). The nodes of Ranvier are separated by a distance | + | <p>J. H. Meier and al. developed a nonhomogeneous and anisotropic model of a nerve <sup>[6]</sup>. We consider a cylindrical nerve of radius a and an axon at a distance r from the axis of the nerve (figure 6). The nodes of Ranvier are separated by a distance l<sub>my</sub>. The point M, where the extracellular potential will be calculated, is located at a distance d = <FONT face="Raleway">ρ</FONT> - a from the surface of the nerve and at a distance <FONT face="Raleway">ρ</FONT>0 from the axon considered. The angle <FONT face="Raleway">θ</FONT> is the angle constructed from the radial position of the axon and the observation point M. The conductivity inside the nerve is different (<FONT face="Raleway">σ</FONT>z and <FONT face="Raleway">σ</FONT><FONT face="Raleway">ρ</FONT>) depending on the direction, longitudinal or radial. We consider two media other than the interior of the nerve: the perineural sheath that surrounds the nerve, of conductivity <FONT face="Raleway">σ</FONT>s, and the outside of the nerve of conductivity <FONT face="Raleway">σ</FONT>e.</p> |
<img src="https://static.igem.org/mediawiki/2018/7/76/T--Pasteur_Paris--InterfaceNerveFigure6.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/7/76/T--Pasteur_Paris--InterfaceNerveFigure6.jpg" style="width:300px"> | ||
<div class="legend"><b>Figure 6: </b>Model of the nerve fascicle, with perineural sheath labeled “s” and external surroundings labeled “e”.<sup>[6]</sup></div> | <div class="legend"><b>Figure 6: </b>Model of the nerve fascicle, with perineural sheath labeled “s” and external surroundings labeled “e”.<sup>[6]</sup></div> | ||
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<img src="https://static.igem.org/mediawiki/2018/3/30/T--Pasteur_Paris--InterfaceNerveFigure7.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/3/30/T--Pasteur_Paris--InterfaceNerveFigure7.jpg" style="width:300px"> | ||
<div class="legend"><b>Figure 7: </b>The line represents the nodal current and the bars represent the currents of the active nodes. Each bar corresponds to one node.<sup>[6]</sup></div> | <div class="legend"><b>Figure 7: </b>The line represents the nodal current and the bars represent the currents of the active nodes. Each bar corresponds to one node.<sup>[6]</sup></div> | ||
− | <p>From this model, the calculation of the extracellular potential is based on the calculation of the electric field in a cylindrical medium. J. H. MEIER and al. established an analytic expression of the extracellular action potential using the medium transfer function in the spatio-frequency domain[6]. With the simplifications we have chosen, this transfer function is the sum of the series presented below by separating, for each term, a factor depending on the respective positions of the axon and the point of observation, and two factors dependent on the physical characteristics of the nerve considered.</p> | + | <p>From this model, the calculation of the extracellular potential is based on the calculation of the electric field in a cylindrical medium. J. H. MEIER and al. established an analytic expression of the extracellular action potential using the medium transfer function in the spatio-frequency domain <sup>[6]</sup>. With the simplifications we have chosen, this transfer function is the sum of the series presented below by separating, for each term, a factor depending on the respective positions of the axon and the point of observation, and two factors dependent on the physical characteristics of the nerve considered.</p> |
− | <p>From this expression, it is possible to determine the "spatial" transfer function h2(z). To do this, it suffices to calculate the inverse Fourier transform of H<FONT face="Raleway">ω</FONT>2, which is done numerically as it can not be practiced analytically[4]. The behavior of these two views of the transfer function is shown in Figure 8 for two reference distances <FONT face="Raleway">ρ</FONT>0 between the observation point M and the axon.</p> | + | <p>From this expression, it is possible to determine the "spatial" transfer function h2(z). To do this, it suffices to calculate the inverse Fourier transform of H<FONT face="Raleway">ω</FONT>2, which is done numerically as it can not be practiced analytically <sup>[4]</sup>. The behavior of these two views of the transfer function is shown in Figure 8 for two reference distances <FONT face="Raleway">ρ</FONT>0 between the observation point M and the axon.</p> |
− | + | ||
<img src="https://static.igem.org/mediawiki/2018/d/dc/T--Pasteur_Paris--InterfaceNerveFigure8.jpg" style="width:400px"> | <img src="https://static.igem.org/mediawiki/2018/d/dc/T--Pasteur_Paris--InterfaceNerveFigure8.jpg" style="width:400px"> | ||
− | <div class="legend"><b>Figure 8: </b>Spatial transfer function h2(z) and space-frequency H2(k) of the nonhomogeneous and anisotropic medium for two distances <FONT face="Raleway">ρ</FONT>0 = 200 and 500 <FONT face="Raleway">μ</FONT>m between the observation point and the axon (depth of the axon in the nerve).<sup> | + | <div class="legend"><b>Figure 8: </b>Spatial transfer function h2(z) and space-frequency H2(k) of the nonhomogeneous and anisotropic medium for two distances <FONT face="Raleway">ρ</FONT>0 = 200 and 500 <FONT face="Raleway">μ</FONT>m between the observation point and the axon (depth of the axon in the nerve).<sup>[4]</sup></div> |
<p>It is of course possible to go from the nonhomogeneous and anisotropic model to the homogeneous isotropic model by considering in the nonhomogeneous and anisotropic model that the conductivities of the media are equal to each other and that the perineurium is infinite. It is clear that the nonhomogeneous and anisotropic model is more realistic but the two models give relatively close medium transfer function variation trends.</p> | <p>It is of course possible to go from the nonhomogeneous and anisotropic model to the homogeneous isotropic model by considering in the nonhomogeneous and anisotropic model that the conductivities of the media are equal to each other and that the perineurium is infinite. It is clear that the nonhomogeneous and anisotropic model is more realistic but the two models give relatively close medium transfer function variation trends.</p> | ||
<p>We have described the two models in order to calculate the potential extracellular created by the presence of nodal currents generated at Ranvier nodes. This extracellular potential at a point M and at a time t can be expressed as the convolution product in the spatial domain between the nodal current i(z, t) and the transfer function of the medium h(z)<sup>[4]</sup>:</p> | <p>We have described the two models in order to calculate the potential extracellular created by the presence of nodal currents generated at Ranvier nodes. This extracellular potential at a point M and at a time t can be expressed as the convolution product in the spatial domain between the nodal current i(z, t) and the transfer function of the medium h(z)<sup>[4]</sup>:</p> | ||
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<p>We consider the typical case of a 8.7 <FONT face="Raleway">μ</FONT>m diameter axon near myelin gains (length lmy=1000 <FONT face="Raleway">μ</FONT>m) and diameter 2.8 <FONT face="Raleway">μ</FONT>m near the Ranvier’s nodes.</p> | <p>We consider the typical case of a 8.7 <FONT face="Raleway">μ</FONT>m diameter axon near myelin gains (length lmy=1000 <FONT face="Raleway">μ</FONT>m) and diameter 2.8 <FONT face="Raleway">μ</FONT>m near the Ranvier’s nodes.</p> | ||
<p>The objective of this part is to study the spatial and spatio-frequency properties of the extracellular potential created by such an axon.</p> | <p>The objective of this part is to study the spatial and spatio-frequency properties of the extracellular potential created by such an axon.</p> | ||
− | <p>Two reference distances (<FONT face="Raleway">ρ</FONT>'=200 <FONT face="Raleway">μ</FONT>m and <FONT face="Raleway">ρ</FONT>'=500 <FONT face="Raleway">μ</FONT>m) are considered between the observation point and the axon. The action potential at the surface and along the nerve is represented figure 9 for the two previous models. Whatever the model used, the low-frequency component - space current envelope (see Figure 9) - is found on the action potential generated. It can be concluded that the action potential has the same wavelength as the nodal currents at Ranvier's node. The nonhomogeneous and anisotropic model, closer to reality, gives a greater amplitude than the homogeneous isotropic model. This phenomenon - due partly to the insulating effect of the extraneural electrode - allows to expect a more easily measurable amplitude at the electrode. We also note that the extracellular action potential has a high frequency ripple, we will call this ripple | + | <p>Two reference distances (<FONT face="Raleway">ρ</FONT>'=200 <FONT face="Raleway">μ</FONT>m and <FONT face="Raleway">ρ</FONT>'=500 <FONT face="Raleway">μ</FONT>m) are considered between the observation point and the axon. The action potential at the surface and along the nerve is represented figure 9 for the two previous models. Whatever the model used, the low-frequency component - space current envelope (see Figure 9) - is found on the action potential generated. It can be concluded that the action potential has the same wavelength as the nodal currents at Ranvier's node. The nonhomogeneous and anisotropic model, closer to reality, gives a greater amplitude than the homogeneous isotropic model. This phenomenon - due partly to the insulating effect of the extraneural electrode - allows to expect a more easily measurable amplitude at the electrode. We also note that the extracellular action potential has a high frequency ripple, we will call this ripple a High Spatial Frequency component (HSF). This ripple is due to the spatial discretization of transmembrane current sources due to the nodes of Ranvier. The position of each peak is related to the location of a Ranvier node and the period of the ripple is directly related to the distance between two Ranvier nodes. Finally, it is interesting to note that the amplitude of these peaks is significant for the low <FONT face="Raleway">ρ</FONT>' distances, that is to say when the axon is close to the surface of the nerve, and this whatever the model used. </p> |
<img src="https://static.igem.org/mediawiki/2018/8/8f/T--Pasteur_Paris--InterfaceNerveFigure9.jpg" style="width:400px"> | <img src="https://static.igem.org/mediawiki/2018/8/8f/T--Pasteur_Paris--InterfaceNerveFigure9.jpg" style="width:400px"> | ||
<div class="legend"><b>Figure 9: </b>Example of calculation of the extracellular action potential at the surface of the nerve for two reference distances (<FONT face="Raleway">ρ</FONT>0=200<FONT face="Raleway">μ</FONT>m and <FONT face="Raleway">ρ</FONT>0=500<FONT face="Raleway">μ</FONT>m) between the observation point and the axon. (1a and 1b) Distribution of nodal currents along the axon (identical). (2a and 2b) Transfer function of the medium according to models homogeneous isotropic model (2a) and nonhomogeneous anisotropic model (2b). (3a and 3b) Distribution of the extracellular action potential as a function of the position of the observation point along the nerve<sup>[4]</sup>. </div> | <div class="legend"><b>Figure 9: </b>Example of calculation of the extracellular action potential at the surface of the nerve for two reference distances (<FONT face="Raleway">ρ</FONT>0=200<FONT face="Raleway">μ</FONT>m and <FONT face="Raleway">ρ</FONT>0=500<FONT face="Raleway">μ</FONT>m) between the observation point and the axon. (1a and 1b) Distribution of nodal currents along the axon (identical). (2a and 2b) Transfer function of the medium according to models homogeneous isotropic model (2a) and nonhomogeneous anisotropic model (2b). (3a and 3b) Distribution of the extracellular action potential as a function of the position of the observation point along the nerve<sup>[4]</sup>. </div> | ||
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<div class="legend"><b>Figure 12: </b>Example of spatial extracellular action potential along a fascicle. For two distances: <FONT face="Raleway">ρ</FONT>0=200 <FONT face="Raleway">μ</FONT>m (solid line) and <FONT face="Raleway">ρ</FONT>0=500 <FONT face="Raleway">μ</FONT>m (dotted line)<sup>[9]</sup>.</div> | <div class="legend"><b>Figure 12: </b>Example of spatial extracellular action potential along a fascicle. For two distances: <FONT face="Raleway">ρ</FONT>0=200 <FONT face="Raleway">μ</FONT>m (solid line) and <FONT face="Raleway">ρ</FONT>0=500 <FONT face="Raleway">μ</FONT>m (dotted line)<sup>[9]</sup>.</div> | ||
<p>The extracellular action potentials for the configuration described in figure 11 are presented in figure 12 for observation sites (M1 and M2). One being close to the fascicle (<FONT face="Raleway">ρ</FONT>0=200 <FONT face="Raleway">μ</FONT>m), and the other being further away (<FONT face="Raleway">ρ</FONT>0=500 <FONT face="Raleway">μ</FONT>m).</p> | <p>The extracellular action potentials for the configuration described in figure 11 are presented in figure 12 for observation sites (M1 and M2). One being close to the fascicle (<FONT face="Raleway">ρ</FONT>0=200 <FONT face="Raleway">μ</FONT>m), and the other being further away (<FONT face="Raleway">ρ</FONT>0=500 <FONT face="Raleway">μ</FONT>m).</p> | ||
− | <p> | + | <p>We can verify some similarities with the study done on a single fiber. We can first see the existence of high spatial frequency components for small distances (<FONT face="Raleway">ρ</FONT>0 = 200 <FONT face="Raleway">μ</FONT>m). Then at greater distances (<FONT face="Raleway">ρ</FONT>0=500 <FONT face="Raleway">μ</FONT>m), these variations are substantially attenuated, and to a lesser extent the low frequency component of the action potential. This observation validates our proposal to observe the effect of Ranvier nodes for action potentials of fascicles. We can see that the peak-to-peak amplitude of the HSF component of this signal is of the order of 10 <FONT face="Raleway">μ</FONT>V (noted VppHF in figure 12). These considerations lead us to believe that this HSF component, a consequence of the activity of the fascicles, will be measurable on the surface of the nerve.</p> |
</div> | </div> | ||
<div class="block title"><h1>VI. Neural information:</h1></div> | <div class="block title"><h1>VI. Neural information:</h1></div> | ||
<div class="block full"> | <div class="block full"> | ||
<p>The neural information is coded by the frequency of the impulses of the action potentials and the number of fibers recruited. The shape and amplitude of the action potentials collected do not convey any neural information but only information on the distance where the nerve fiber is located in the nerve.</p> | <p>The neural information is coded by the frequency of the impulses of the action potentials and the number of fibers recruited. The shape and amplitude of the action potentials collected do not convey any neural information but only information on the distance where the nerve fiber is located in the nerve.</p> | ||
− | <p>In the same nerve, several types of information transit. The nerve carries efferent neuronal signals, from the central nervous system to the peripheral nervous system, which | + | <p>In the same nerve, several types of information transit. The nerve carries efferent neuronal signals, from the central nervous system to the peripheral nervous system, which regulates and control the body's natural functions through muscle recruitment. But nerves also carry information from natural sensors (mechanoreceptors, proprioceptive, etc.) and transiting to the central nervous system by activation of the afferent nerve fibers. Generally, muscle recruitment and sensory fiber activation are not coded in the same way.</p> |
− | <p>In the case of motor or efferent fibers, the number of active motor units as well as their discharge frequencies vary at the same time as the force produced by the muscle<sup>[10]</sup>.</p> | + | <p>In the case of motor or efferent fibers, the number of active motor units, as well as their discharge frequencies, vary at the same time as the force produced by the muscle<sup>[10]</sup>.</p> |
</div> | </div> | ||
<div class="block separator-mark"></div> | <div class="block separator-mark"></div> | ||
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<p>We presented the calculation of the spatial action potential at the surface of the nerve. Based on these results, we exposed the construction of a nerve model for which the fascicles are generated randomly. This model allows us to represent a fascicular activity on the surface of the nerve. We show that the high spatial frequency component can be present at the surface of the nerve, but only for fascicles close to the point of measurement.</p> | <p>We presented the calculation of the spatial action potential at the surface of the nerve. Based on these results, we exposed the construction of a nerve model for which the fascicles are generated randomly. This model allows us to represent a fascicular activity on the surface of the nerve. We show that the high spatial frequency component can be present at the surface of the nerve, but only for fascicles close to the point of measurement.</p> | ||
<p>Finally, we have shown that the amplitude of this component is of the order of ten microvolts.</p> | <p>Finally, we have shown that the amplitude of this component is of the order of ten microvolts.</p> | ||
+ | <p> All the information presented can be used to realize an extraneural electrode having the desired performances.</p> | ||
<p></p> | <p></p> | ||
</div> | </div> | ||
<div class="block title"><h1>REFERENCES</h1></div> | <div class="block title"><h1>REFERENCES</h1></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <ul style="text-align: left;"> | + | <ul style="text-align: left;list-style: disc;"> |
− | <li style="list-style-type: decimal;">P. | + | <li style="list-style-type: decimal;">Rigoard, P., Buffenoir, K., Wager, M., Bauche, S., Giot, J.-P., Robert, R., and Lapierre, F. (2009). Organisation anatomique et physiologique du nerf périphérique. /data/revues/00283770/v55sS1/S0028377008004025/.<br><br></li> |
− | <li style="list-style-type: decimal;">https://www.studyblue.com/notes/note/n/chapter-11-nervous-system-ii-divisions-of-the-nervous-system/deck/8819508 | + | <li style="list-style-type: decimal;"> https://www.studyblue.com/notes/note/n/chapter-11-nervous-system-ii-divisions-of-the-nervous-system/deck/8819508 <br><br></li> |
− | <li style="list-style-type: decimal;"> | + | <li style="list-style-type: decimal;">Hodgkin, A.L., and Huxley, A.F. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117, 500–544.<br><br></li> |
<li style="list-style-type: decimal;">Olivier Rossel. Dispositifs de mesure et d’interprétation de l’activité d’un nerf. Electronique. Université Montpellier II - Sciences et Techniques du Languedoc, 2012. Français.<br><br> </li> | <li style="list-style-type: decimal;">Olivier Rossel. Dispositifs de mesure et d’interprétation de l’activité d’un nerf. Electronique. Université Montpellier II - Sciences et Techniques du Languedoc, 2012. Français.<br><br> </li> | ||
− | <li style="list-style-type: decimal;">C. C. | + | <li style="list-style-type: decimal;">McIntyre, C.C., Richardson, A.G., and Grill, W.M. (2002). Modeling the excitability of mammalian nerve fibers: influence of afterpotentials on the recovery cycle. J. Neurophysiol. 87, 995–1006.<br><br></li> |
− | <li style="list-style-type: decimal;"> | + | <li style="list-style-type: decimal;">H. Meier, J., Rutten, W., and B K Boom, H. (1998). Extracellular potentials from active myelinated fibers inside insulated and noninsulated peripheral nerve. Biomedical Engineering, IEEE Transactions On 45, 1146–1153.<br><br> </li> |
− | <li style="list-style-type: decimal;">Rossel, O. | + | <li style="list-style-type: decimal;">Rossel, O., Soulier, F., Bernard, S., and Cathébras, G. (2011b). Sensitivity of a Frequency-Selective Electrode Based on Spatial Spectral Properties of the Extracellular AP of Myelinated Nerve Fibers. Conference Proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011, 5843–5846.<br><br></li> |
<li style="list-style-type: decimal;">K. J. GUSTAFSON et al. « Fascicular anatomy and surgical access of the human pudendal nerve. » World journal of urology 23.6 (déc. 2005), p. 411–418. ISSN : 0724-4983. DOI : 10.1007/s00345-005-0032-4.<br><br></li> | <li style="list-style-type: decimal;">K. J. GUSTAFSON et al. « Fascicular anatomy and surgical access of the human pudendal nerve. » World journal of urology 23.6 (déc. 2005), p. 411–418. ISSN : 0724-4983. DOI : 10.1007/s00345-005-0032-4.<br><br></li> | ||
− | <li style="list-style-type: decimal;">Rossel, O., Soulier, F., Coulombe, J., Bernard, S., | + | <li style="list-style-type: decimal;">Rossel, O., Soulier, F., Coulombe, J., Bernard, S., and Cathébras, G. (2011a). Fascicle-selective multi-contact cuff electrode. Conf Proc IEEE Eng Med Biol Soc 2011, 2989–2992<br><br></li> |
− | <li style="list-style-type: decimal;">R. | + | <li style="list-style-type: decimal;">Merletti, R., Holobar, A., and Farina, D. (2008). Analysis of motor units with high-density surface electromyography. Journal of Electromyography and Kinesiology 18, 879–890.<br><br></li> |
</ul> | </ul> | ||
</div> | </div> | ||
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<p>Helicoidal electrodes are placed surrounding the nerve and are made of flexible metal ribbon in a helical design. This design allows the electrode to conform to the size and shape of the nerve to minimize mechanical trauma. The structural design causes low selectivity. Helicoidal electrodes are currently used for functional electrical stimulation, to control intractable epilepsy, sleep apnea, and to treat depressive syndromes.</p> | <p>Helicoidal electrodes are placed surrounding the nerve and are made of flexible metal ribbon in a helical design. This design allows the electrode to conform to the size and shape of the nerve to minimize mechanical trauma. The structural design causes low selectivity. Helicoidal electrodes are currently used for functional electrical stimulation, to control intractable epilepsy, sleep apnea, and to treat depressive syndromes.</p> | ||
</div> | </div> | ||
− | <div class="block title"><h3 style="text-align: left;">2. Cuff electrode:</h3></div> | + | <div class="block title"><h3 style="text-align: left;">2. Cuff electrode <sup>[2]</sup>:</h3></div> |
<div class="block full"> | <div class="block full"> | ||
<p>Considered as extraneural electrodes, cuff electrodes are widely used to perform basic and applied electro-neurophysiology studies and are particularly interesting for their ability to achieve good nerve recruitment with low thresholds. The cuff-style electrode provides a cylindrical electrode contact with a nerve for each of an arbitrary number of contacts, is easy to place and remove in an acute nerve preparation, and is designed to fit on the nerve (Cf. Figure 1). For each electrode, the electrical contacts were cut from metal foil as an array so as to maintain their positions relative to each other within the cuff. Lead wires were soldered to each intended contact. The structure was then molded in silicone elastomer, and individual contacts were electrically isolated. The final electrode is curved into a cylindrical shape with an inner diameter corresponding to that of the intended target nerve. These electrodes have been successfully used for nerve stimulation, recording, and conduction block in a number of different acute animal experiments by several investigators.</p> | <p>Considered as extraneural electrodes, cuff electrodes are widely used to perform basic and applied electro-neurophysiology studies and are particularly interesting for their ability to achieve good nerve recruitment with low thresholds. The cuff-style electrode provides a cylindrical electrode contact with a nerve for each of an arbitrary number of contacts, is easy to place and remove in an acute nerve preparation, and is designed to fit on the nerve (Cf. Figure 1). For each electrode, the electrical contacts were cut from metal foil as an array so as to maintain their positions relative to each other within the cuff. Lead wires were soldered to each intended contact. The structure was then molded in silicone elastomer, and individual contacts were electrically isolated. The final electrode is curved into a cylindrical shape with an inner diameter corresponding to that of the intended target nerve. These electrodes have been successfully used for nerve stimulation, recording, and conduction block in a number of different acute animal experiments by several investigators.</p> | ||
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<div class="block title"><h3 style="text-align: left;">3. FINE electrode:</h3></div> | <div class="block title"><h3 style="text-align: left;">3. FINE electrode:</h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>The flat-interface nerve electrode (FINE) was designed for selective nerve recording by realigning the fascicles and reshaping the nerve into a more flattened cross section which increases the surface area of the exposed nerve and offers greater access to fascicles. This kind of electrode is particularly interesting as it was possible to achieve more than 90% selectivity (Cf. Figure 2)</p> | + | <p>The flat-interface nerve electrode (FINE) was designed for selective nerve recording by realigning the fascicles and reshaping the nerve into a more flattened cross section which increases the surface area of the exposed nerve and offers greater access to fascicles. This kind of electrode is particularly interesting as it was possible to achieve more than 90% selectivity <sup>[3]</sup> (Cf. Figure 2)</p> |
<img src="https://static.igem.org/mediawiki/2018/e/e3/T--Pasteur_Paris--ElectrodeFigure2.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/e/e3/T--Pasteur_Paris--ElectrodeFigure2.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 2: </b>Cross section and schematic of a FINE electrode<sup>[ | + | <div class="legend"><b>Figure 2: </b>Cross section and schematic of a FINE electrode<sup>[4]</sup></div> |
</div> | </div> | ||
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<p>The most relevant information to extract is the discharge frequency of active fibers because it represents the means of coding information by the nervous system. Significantly, such processing must be applied to signals representing the activity of a limited number of fibers. In fact, the published examples relate exclusively to intra-neural collection: the only method, today, which allows to observe the activity of fibers alone. However, since we don’t want to use intra-neural electrode in our device we will not detail how to extract the discharge frequency.</p> | <p>The most relevant information to extract is the discharge frequency of active fibers because it represents the means of coding information by the nervous system. Significantly, such processing must be applied to signals representing the activity of a limited number of fibers. In fact, the published examples relate exclusively to intra-neural collection: the only method, today, which allows to observe the activity of fibers alone. However, since we don’t want to use intra-neural electrode in our device we will not detail how to extract the discharge frequency.</p> | ||
</div> | </div> | ||
− | <div class="block title"><h3 style="text-align: left;">2. Envelope extraction:</h3></div> | + | <div class="block title"><h3 style="text-align: left;">2. Envelope extraction <sup>[5]</sup>:</h3></div> |
<div class="block full"> | <div class="block full"> | ||
<p>Rectification and Bin-Integration (RBI) of the nerve raw signal is widely used in rehabilitation application. This point of RBI ENG is found by calculating the average of the absolute value of ENG samples spread over a given period of time. This period is called “bin” and its value depends on the application. It ranges from 10 ms to 200 ms. The smoothed envelope-like signal created by RBI makes it easy to extract information about the innervated organ.</p> | <p>Rectification and Bin-Integration (RBI) of the nerve raw signal is widely used in rehabilitation application. This point of RBI ENG is found by calculating the average of the absolute value of ENG samples spread over a given period of time. This period is called “bin” and its value depends on the application. It ranges from 10 ms to 200 ms. The smoothed envelope-like signal created by RBI makes it easy to extract information about the innervated organ.</p> | ||
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<div class="block separator-mark"></div> | <div class="block separator-mark"></div> | ||
<div class="block title"><h1>III. Improvement of the electroneurogram records selectivity</h1></div> | <div class="block title"><h1>III. Improvement of the electroneurogram records selectivity</h1></div> | ||
− | <div class="block title"><h3 style="text-align: left;">1. ENG-EMG selectivity:</h3></div> | + | <div class="block title"><h3 style="text-align: left;">1. ENG-EMG selectivity <sup>[6]</sup>:</h3></div> |
<div class="block full"> | <div class="block full"> | ||
<p>The body is made so that a nerve is never very far from a muscle. However, the triggering and control of muscle contractions use a similar mechanism to the propagation of nerve impulses. Thus, the vicinity of a muscle is the seat of important extracellular currents because of the large number of muscle fibers excited simultaneously. The potential differences associated with these currents are called EMG, for electromyogram. Action potentials in muscle have mV amplitude, larger than a neural signal, and their spectra overlap. Minimizing these forms of interference is there for essential.</p> | <p>The body is made so that a nerve is never very far from a muscle. However, the triggering and control of muscle contractions use a similar mechanism to the propagation of nerve impulses. Thus, the vicinity of a muscle is the seat of important extracellular currents because of the large number of muscle fibers excited simultaneously. The potential differences associated with these currents are called EMG, for electromyogram. Action potentials in muscle have mV amplitude, larger than a neural signal, and their spectra overlap. Minimizing these forms of interference is there for essential.</p> | ||
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<p>Thus, the impact of EMG on the measurement is significantly attenuated, while the ENG is preserved</p> | <p>Thus, the impact of EMG on the measurement is significantly attenuated, while the ENG is preserved</p> | ||
<img src="https://static.igem.org/mediawiki/2018/2/21/T--Pasteur_Paris--ElectrodeFigure3.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/2/21/T--Pasteur_Paris--ElectrodeFigure3.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 3: </b>Comparison of the potential in the cuff due to EMG and ENG sources. </div> | + | <div class="legend"><b>Figure 3: </b>Comparison of the potential in the cuff due to EMG and ENG sources <sup>[6]</sup>. </div> |
<p>The electronic realization of this treatment is very simple, it can be done in two different ways using either one or three differential amplifiers, these structures are named respectively "quasi-tripole" and "true-tripole" (Cf. Figure 4)</p> | <p>The electronic realization of this treatment is very simple, it can be done in two different ways using either one or three differential amplifiers, these structures are named respectively "quasi-tripole" and "true-tripole" (Cf. Figure 4)</p> | ||
<img src="https://static.igem.org/mediawiki/2018/2/2e/T--Pasteur_Paris--ElectrodeFigure4.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/2/2e/T--Pasteur_Paris--ElectrodeFigure4.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 4: </b>(a) The QT amplifier configuration connected to a tripolar cuff. (b) The TT amplifier configuration.</div> | + | <div class="legend"><b>Figure 4: </b>(a) The QT amplifier configuration connected to a tripolar cuff. (b) The TT amplifier configuration <sup>[6]</sup>.</div> |
</div> | </div> | ||
− | <div class="block title"><h3 style="text-align: left;">2. Type of nerve fiber selectivity:</h3></div> | + | <div class="block title"><h3 style="text-align: left;">2. Type of nerve fiber selectivity <sup>[7]</sup>:</h3></div> |
<div class="block full"> | <div class="block full"> | ||
<p>Nerves carry a lot of different neural signals, with both afferent and efferent traffic. However, by recording the signal we reduce it to only one artificial signal and we lose a lot of information. As the different types of signals are transmitted by fibers of different diameters, it should be interesting to select the fiber we record according to its diameter.</p> | <p>Nerves carry a lot of different neural signals, with both afferent and efferent traffic. However, by recording the signal we reduce it to only one artificial signal and we lose a lot of information. As the different types of signals are transmitted by fibers of different diameters, it should be interesting to select the fiber we record according to its diameter.</p> | ||
<p>The method (Cf. Figure 5) uses a double differential array of amplifiers ('tripole amplifiers') and, for each selected velocity (of either sign), artificial time delays, as well as an adder and a narrow-band filter. An action potential transiting the nerve will be perceived in the same way by each tripole, but with delays inversely proportional to the speed of propagation of the action potential. If this time offset is compensated by the delay added by the measurement system, the action potentials appear simultaneously at the output of the delay stages. Thus, summing them to each other, the amplitude of the action potential is amplified. This system makes it possible to amplify the measurement for this particular action potential. Whereas, for another action potential having a different speed or direction of propagation, the amplification will not take place because the delay implemented in the system does not correspond to the delay due to the propagation of the action potential. This system is therefore selective for a given propagation speed.</p> | <p>The method (Cf. Figure 5) uses a double differential array of amplifiers ('tripole amplifiers') and, for each selected velocity (of either sign), artificial time delays, as well as an adder and a narrow-band filter. An action potential transiting the nerve will be perceived in the same way by each tripole, but with delays inversely proportional to the speed of propagation of the action potential. If this time offset is compensated by the delay added by the measurement system, the action potentials appear simultaneously at the output of the delay stages. Thus, summing them to each other, the amplitude of the action potential is amplified. This system makes it possible to amplify the measurement for this particular action potential. Whereas, for another action potential having a different speed or direction of propagation, the amplification will not take place because the delay implemented in the system does not correspond to the delay due to the propagation of the action potential. This system is therefore selective for a given propagation speed.</p> | ||
<img src="https://static.igem.org/mediawiki/2018/0/0b/T--Pasteur_Paris--ElectrodeFigure5.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/0/0b/T--Pasteur_Paris--ElectrodeFigure5.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 5: </b>Multi-electrode cuff (MEC), array of tripole amplifiers and signal processing unit for selecting one velocity. </div> | + | <div class="legend"><b>Figure 5: </b>Multi-electrode cuff (MEC), array of tripole amplifiers and signal processing unit for selecting one velocity <sup>[7]</sup>. </div> |
</div> | </div> | ||
− | <div class="block title"><h3 style="text-align: left;">3. Spatial selectivity:</h3></div> | + | <div class="block title"><h3 style="text-align: left;">3. Spatial selectivity <sup>[8]</sup>:</h3></div> |
<div class="block full"> | <div class="block full"> | ||
<p>Methods aim to increase the spatial selectivity of extra-neural electrodes to discriminate active fascicles, in order to determine the activity of each nerve branch.</p> | <p>Methods aim to increase the spatial selectivity of extra-neural electrodes to discriminate active fascicles, in order to determine the activity of each nerve branch.</p> | ||
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<div class="block separator-mark"></div> | <div class="block separator-mark"></div> | ||
− | <div class="block title"><h1>IV. An example of the development of a multi-channel acquisition device</h1></div> | + | <div class="block title"><h1>IV. An example of the development of a multi-channel acquisition device <sup>[9]</sup></h1></div> |
<div class="block full"> | <div class="block full"> | ||
<p>Olivier Rossel, in his thesis, chose to work on improving the selectivity of the cuff electrodes. He chose this type of electrode because they respect the integrity of the nerve and its fascicles membranes and that they make it possible to limit both the number of implants and the complexity surgical gesture. The electrode need reject the EMG signals and to measure local ENGs at multiple sites around the nerve.</p> | <p>Olivier Rossel, in his thesis, chose to work on improving the selectivity of the cuff electrodes. He chose this type of electrode because they respect the integrity of the nerve and its fascicles membranes and that they make it possible to limit both the number of implants and the complexity surgical gesture. The electrode need reject the EMG signals and to measure local ENGs at multiple sites around the nerve.</p> | ||
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<p>As we saw previously, it is possible to reject the EMG signal by using a tripolar cuff electrode (Cf. Figure 6). A tripolar cuff and the adapted electrical treatment is used.</p> | <p>As we saw previously, it is possible to reject the EMG signal by using a tripolar cuff electrode (Cf. Figure 6). A tripolar cuff and the adapted electrical treatment is used.</p> | ||
<img src="https://static.igem.org/mediawiki/2018/d/d7/T--Pasteur_Paris--ElectrodeFigure6.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/d/d7/T--Pasteur_Paris--ElectrodeFigure6.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 6:</b> Schematic of a tripolar cuff electrode.</div> | + | <div class="legend"><b>Figure 6:</b> Schematic of a tripolar cuff electrode <sup>[9]</sup>.</div> |
</div> | </div> | ||
<div class="block title"><h3 style="text-align: left;">2. Tripolar treatment analysis</h3></div> | <div class="block title"><h3 style="text-align: left;">2. Tripolar treatment analysis</h3></div> | ||
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<div class="block title"><h3 style="text-align: left;">3. Electrode sizing</h3></div> | <div class="block title"><h3 style="text-align: left;">3. Electrode sizing</h3></div> | ||
<div class="block full"> | <div class="block full"> | ||
− | <p>n order to increase neural information relative to the noise, it is vital to optimize the cuff dimensions. The literature suggests that the best compromise between cuff length and the available place is a cuff length close to the wavelength of the transmembrane action potential. This one is approximately linear with fiber diameter.</p> | + | <p>n order to increase neural information relative to the noise, it is vital to optimize the cuff dimensions. The literature suggests that the best compromise between cuff length and the available place is a cuff length close to the wavelength of the transmembrane action potential. This one is approximately linear with fiber diameter <sup>[10]</sup>.</p> |
− | <p>According to Struijk, the action potential propagation velocity can be approximated as 55.800 nodes/s and the duration, of the transmembrane action potential, is approximately 0,4 ms.</p> | + | <p>According to Struijk <sup>[11]</sup>, the action potential propagation velocity can be approximated as 55.800 nodes/s and the duration, of the transmembrane action potential, is approximately 0,4 ms.</p> |
− | <p>Thus, to have an optimal measurement, the cuff electrode must cover 22 nodes of Ranvier. The inter-pole distance must, therefore, be adjusted to h = 11 | + | <p>Thus, to have an optimal measurement, the cuff electrode must cover 22 nodes of Ranvier. The inter-pole distance must, therefore, be adjusted to h = 11 l<sub>my</sub> (l<sub>my</sub> is the length of myelin separating two nodes of Ranvier). So, for a typical fiber, the inter-electrode distance h should be about 1 cm, which is used in most ENG measuring electrodes.</p> |
<img src="https://static.igem.org/mediawiki/2018/1/10/T--Pasteur_Paris--ElectrodeFigure7.jpg" style="width:390px"> | <img src="https://static.igem.org/mediawiki/2018/1/10/T--Pasteur_Paris--ElectrodeFigure7.jpg" style="width:390px"> | ||
− | <div class="legend"><b>Figure 7: </b>Extra-neural potential of monopolar action according to the position of the measuring point. The diagram at the top left shows the simulated situation. At the top right, the simulation corresponding to this configuration is represented: calculation of twice five monopolar potentials, for a typical axon (diameter of 8.7 <FONT face="Raleway">μ</FONT>m, and lmy= 1 mm). The distances from this axon to the measurement points are <FONT face="Raleway">ρ</FONT>1=100 <FONT face="Raleway">μ</FONT>m for site A and <FONT face="Raleway">ρ</FONT>2=500 <FONT face="Raleway">μ</FONT>m for site B. Below, the monopolar signals at points “a” to “e” are shown for each of the measurement sites.</div> | + | <div class="legend"><b>Figure 7: </b>Extra-neural potential of monopolar action according to the position of the measuring point. The diagram at the top left shows the simulated situation. At the top right, the simulation corresponding to this configuration is represented: calculation of twice five monopolar potentials, for a typical axon (diameter of 8.7 <FONT face="Raleway">μ</FONT>m, and lmy= 1 mm). The distances from this axon to the measurement points are <FONT face="Raleway">ρ</FONT>1=100 <FONT face="Raleway">μ</FONT>m for site A and <FONT face="Raleway">ρ</FONT>2=500 <FONT face="Raleway">μ</FONT>m for site B. Below, the monopolar signals at points “a” to “e” are shown for each of the measurement sites <sup>[9]</sup>.</div> |
<p>Knowing the characteristics of the electrode we want, it is possible to evaluate the distance h between the poles. This distance is of the order of a hundred micrometers which is much lower than that of a classical tripole which is of the order of a centimeter. This is why we will call, in the rest of this work, the tripole proposed a "small tripole".</p> | <p>Knowing the characteristics of the electrode we want, it is possible to evaluate the distance h between the poles. This distance is of the order of a hundred micrometers which is much lower than that of a classical tripole which is of the order of a centimeter. This is why we will call, in the rest of this work, the tripole proposed a "small tripole".</p> | ||
</div> | </div> | ||
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<p>For the small tripole, we have a fast attenuation depending on the distance compared to big tripole (Cf. Figure 8). As figure 8 confirms it, the small tripole is much more selective than the big tripole. Moreover, figure 9 shows that despite the low power level of the targeted signals and the spatial filtering performed, the peak-to-peak amplitude of the output signals of the tripole can reach 6 <FONT face="Raleway">μ</FONT>V for a single active fiber. Considering the superposition of signals - the simultaneous activity of several fibers - we can hope to reach larger amplitude. Even if it is the case, the output signals of a small tripole remain of very low amplitude and it will thus be necessary to be very attentive to the sources of noise to maintain an acceptable signal-to-noise ratio.</p> | <p>For the small tripole, we have a fast attenuation depending on the distance compared to big tripole (Cf. Figure 8). As figure 8 confirms it, the small tripole is much more selective than the big tripole. Moreover, figure 9 shows that despite the low power level of the targeted signals and the spatial filtering performed, the peak-to-peak amplitude of the output signals of the tripole can reach 6 <FONT face="Raleway">μ</FONT>V for a single active fiber. Considering the superposition of signals - the simultaneous activity of several fibers - we can hope to reach larger amplitude. Even if it is the case, the output signals of a small tripole remain of very low amplitude and it will thus be necessary to be very attentive to the sources of noise to maintain an acceptable signal-to-noise ratio.</p> | ||
<img src="https://static.igem.org/mediawiki/2018/f/fb/T--Pasteur_Paris--ElectrodeFigure8.png" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/f/fb/T--Pasteur_Paris--ElectrodeFigure8.png" style="width:300px"> | ||
− | <div class="legend"><b>Figure 8: </b>Peak-to-peak amplitudes of the output action potential of a small tripole and of a big one</div> | + | <div class="legend"><b>Figure 8: </b>Peak-to-peak amplitudes of the output action potential of a small tripole and of a big one <sup>[9]</sup>.</div> |
<img src="https://static.igem.org/mediawiki/2018/b/b2/T--Pasteur_Paris--ElectrodeFigure9.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/b/b2/T--Pasteur_Paris--ElectrodeFigure9.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 9: </b> Peak-to-peak amplitudes measure at the output of a big tripole (left) or a small tripole (right) in function of the position of the active axon (diameter 8, 7 <FONT face="Raleway">μ</FONT>m, and lmy=1 mm) in a cylindrical nerve of 300 <FONT face="Raleway">μ</FONT>m in diameter.</div> | + | <div class="legend"><b>Figure 9: </b> Peak-to-peak amplitudes measure at the output of a big tripole (left) or a small tripole (right) in function of the position of the active axon (diameter 8, 7 <FONT face="Raleway">μ</FONT>m, and lmy=1 mm) in a cylindrical nerve of 300 <FONT face="Raleway">μ</FONT>m in diameter <sup>[9]</sup>.</div> |
</div> | </div> | ||
<div class="block title"><h3 style="text-align: left;">6. Selectivity study:</h3></div> | <div class="block title"><h3 style="text-align: left;">6. Selectivity study:</h3></div> | ||
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<p>Olivier ROSSEL developed a new electrode architecture he compared to the FINE electrode. The FINE electrode used is the one developed by Paul YOO and Dominique DURAND (Cf. Figure 7).</p> | <p>Olivier ROSSEL developed a new electrode architecture he compared to the FINE electrode. The FINE electrode used is the one developed by Paul YOO and Dominique DURAND (Cf. Figure 7).</p> | ||
<img src="https://static.igem.org/mediawiki/2018/e/ec/T--Pasteur_Paris--ElectrodeFigure10.png" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/e/ec/T--Pasteur_Paris--ElectrodeFigure10.png" style="width:300px"> | ||
− | <div class="legend"><b>Figure 10: </b>FINE electrode, h = 0,5 mm.</div> | + | <div class="legend"><b>Figure 10: </b>FINE electrode, h = 0,5 mm <sup>[9]</sup>.</div> |
<p>Olivier ROSSEL tried to improve this electrode replacing each measure point by a small tripole and by deleting two external ring. He called this electrode the FORTE electrode for “FINE with Original Recording Tripolar Electrode” (Cf. Figure 11). The main difference between these two electrodes is the inter-poles distance in the longitudinal way.</p> | <p>Olivier ROSSEL tried to improve this electrode replacing each measure point by a small tripole and by deleting two external ring. He called this electrode the FORTE electrode for “FINE with Original Recording Tripolar Electrode” (Cf. Figure 11). The main difference between these two electrodes is the inter-poles distance in the longitudinal way.</p> | ||
<img src="https://static.igem.org/mediawiki/2018/3/34/T--Pasteur_Paris--ElectrodeFigure11.png" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/3/34/T--Pasteur_Paris--ElectrodeFigure11.png" style="width:300px"> | ||
− | <div class="legend"><b>Figure 11: </b>FORTE electrode, h = 375 <FONT face="Raleway">μ</FONT>m.</div> | + | <div class="legend"><b>Figure 11: </b>FORTE electrode, h = 375 <FONT face="Raleway">μ</FONT>m <sup>[9]</sup>.</div> |
<img src="https://static.igem.org/mediawiki/2018/9/93/T--Pasteur_Paris--ElectrodeFigure12.png" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/9/93/T--Pasteur_Paris--ElectrodeFigure12.png" style="width:300px"> | ||
− | <div class="legend"><b>Figure 12: </b>Two fascicles represented in the electrode. These disposition of the fascicles is the one used for the simulations made to obtain figure 13 and figure 14</div> | + | <div class="legend"><b>Figure 12: </b>Two fascicles represented in the electrode. These disposition of the fascicles is the one used for the simulations made to obtain figure 13 and figure 14 <sup>[9]</sup>. </div> |
<p>The activity of two fascicles is simulated (Cf. Figure 12) and the peak-to-peak amplitudes of the output signals are compared (Cf. Figure 13). The first difference we see is the signal from the FORTE electrode is attenuated 20 dB compared to the FINE electrode. In figure 13, we see that when only one fascicle is active, the FORTE electrode makes it possible to locate the active fascicle much more easily than the FINE electrode.</p> | <p>The activity of two fascicles is simulated (Cf. Figure 12) and the peak-to-peak amplitudes of the output signals are compared (Cf. Figure 13). The first difference we see is the signal from the FORTE electrode is attenuated 20 dB compared to the FINE electrode. In figure 13, we see that when only one fascicle is active, the FORTE electrode makes it possible to locate the active fascicle much more easily than the FINE electrode.</p> | ||
<img src="https://static.igem.org/mediawiki/2018/4/43/T--Pasteur_Paris--ElectrodeFigure13.jpg" style="width:300px"> | <img src="https://static.igem.org/mediawiki/2018/4/43/T--Pasteur_Paris--ElectrodeFigure13.jpg" style="width:300px"> | ||
− | <div class="legend"><b>Figure 13: </b>Peak-to-peak tension received by the tripole n (from tripole 1 to tripole 13) for the red and black fascicles.</div> | + | <div class="legend"><b>Figure 13: </b>Peak-to-peak tension received by the tripole n (from tripole 1 to tripole 13) for the red and black fascicles <sup>[9]</sup>.</div> |
<p>Moreover, in the general case of a simultaneous activity of different fascicles, the signals from the different active fascicles are summed at the level of each tripoles (Cf. Figure 14). We can see that for the FINE electrode the amplitude measured makes it impossible to differentiate the active fascicles. However, for the FORTE electrode, since the small tripole is locally sensitive, we can’t see the difference between the figure 13 and the figure 14. It is easy to differentiate the active fascicles.</p> | <p>Moreover, in the general case of a simultaneous activity of different fascicles, the signals from the different active fascicles are summed at the level of each tripoles (Cf. Figure 14). We can see that for the FINE electrode the amplitude measured makes it impossible to differentiate the active fascicles. However, for the FORTE electrode, since the small tripole is locally sensitive, we can’t see the difference between the figure 13 and the figure 14. It is easy to differentiate the active fascicles.</p> | ||
<img src="https://static.igem.org/mediawiki/2018/9/9d/T--Pasteur_Paris--ElectrodeFigure14.jpg" style="width:400px"> | <img src="https://static.igem.org/mediawiki/2018/9/9d/T--Pasteur_Paris--ElectrodeFigure14.jpg" style="width:400px"> | ||
− | <div class="legend"><b>Figure 14: </b>Simulated ENG for FINE electrode (A) and for the FORTE electrode (B) for the two fascicles in the case of a simultaneous activity. The contribution of each fascicles is designed by the color avec the fascicles in the figure 13. Each fascicle contains around two hundred active axons.</div> | + | <div class="legend"><b>Figure 14: </b>Simulated ENG for FINE electrode (A) and for the FORTE electrode (B) for the two fascicles in the case of a simultaneous activity. The contribution of each fascicles is designed by the color avec the fascicles in the figure 13. Each fascicle contains around two hundred active axons <sup>[9]</sup>.</div> |
<p>Finally, we see the FORTE electrode can surpass in selectivity the FINE electrode. The FORTE electrode is a great example of an electrode we could use for our device.</p> | <p>Finally, we see the FORTE electrode can surpass in selectivity the FINE electrode. The FORTE electrode is a great example of an electrode we could use for our device.</p> | ||
</div> | </div> | ||
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<div class="block title"><h1>References</h1></div> | <div class="block title"><h1>References</h1></div> | ||
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− | <ul style="text-align: left;" | + | <ul style="text-align: left; list-style: disc;"> |
− | + | ||
<li style="list-style-type: decimal;">MicroProbes for Life Sciences, « Nerve Cuff Electrodes ». Retrieved Oct. 14th, 2018 from https://microprobes.com/products/peripheral-electrodes/nerve-cuff</li> | <li style="list-style-type: decimal;">MicroProbes for Life Sciences, « Nerve Cuff Electrodes ». Retrieved Oct. 14th, 2018 from https://microprobes.com/products/peripheral-electrodes/nerve-cuff</li> | ||
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Latest revision as of 14:49, 10 November 2018
Membrane
When manipulating genetically engineered organisms, it is crucial to guarantee the confinement of these organisms. In our case, we want genetically modified bacteria to stay at the interface between the prosthesis and the external organic medium. At the same time, one of the main issues our project wants to tackle is the conduction of the neuron influx to the prosthesis. The answer to these questions came as a double solution: confinement of the bacteria by conductive nanoporous membranes. The membrane’s nanoporosity allows substances produced by our modified biofilm to pass through the membrane, but the bacteria remain confined. We tested the conductivity and biocompatibility of two types of membranes.
Membrane
Nerve and electrodes
As seen in the other parts of this wiki, we chose to use a nanoporous membrane in our device. The first goal of the membrane was to confine our biofilm, so it does not escape the prosthesis. Moreover, we also used our membrane as a conductive electrode. This solution was interesting since we didn’t have enough time to develop an entire electrical device which collects and treat the signal of the nerves. However, we know we still need to improve our interface if we want the patient to fully control his prosthesis. That is why we decided to look at what is already made in this field. So, first, we detailed how it is possible to model the electrical characteristics of a nerve. Then, we searched for information on electrodes and signal treatment.
This section is principally based on the thesis of Olivier Rossel: Dispositifs de measure et d’interprétation de l’activité d’un nerf. Electronique. Université Montpellier II - Sciences et Techniques du Languedoc, 2012. Français.