Difference between revisions of "Team:Pasteur Paris/Safety"

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<h1>SAFETY</h1>
<h1> Safety </h1>
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</div>
<p>Please visit the <a href="https://2018.igem.org/Safety">Safety Hub</a> to find this year's safety requirements & deadlines, and to learn about safe & responsible research in iGEM.</p>
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<p>On this page of your wiki, you should write about how you are addressing any safety issues in your project. The wiki is a place where you can <strong>go beyond the questions on the safety forms</strong>, and write about whatever safety topics are most interesting in your project. (You do not need to copy your safety forms onto this wiki page.)</p>
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<h3>Safe Project Design</h3>
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<p>Does your project include any safety features? Have you made certain decisions about the design to reduce risks? Write about them here! For example:</p>
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<ul>
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<li>Choosing a non-pathogenic chassis</li>
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<li>Choosing parts that will not harm humans / animals / plants</li>
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<li>Substituting safer materials for dangerous materials in a proof-of-concept experiment</li>
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<li>Including an "induced lethality" or "kill-switch" device</li>
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</ul>
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<h3>Safe Lab Work</h3>
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<p>What safety procedures do you use every day in the lab? Did you perform any unusual experiments, or face any unusual safety issues? Write about them here!</p>
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<h3>Safe Shipment</h3>
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<p>Did you face any safety problems in sending your DNA parts to the Registry? How did you solve those problems?</p>
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<div id="GeneralContent">
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<div id="index" class="block">
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<div id="indexContent">
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<p><a href="#Environment" class="link">Environmental Safety</a></p>
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<p><a href="#LabSafety" class="link">Lab Safety</a></p>
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<p><a href="#References" class="link">References</a></p>
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<div class="block title" id="Environment">
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<h1>SAFETY FOR THE ENVIRONMENT</h1>
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<p>A major concern of our project is to prevent any risk for the environment and the human body. The genetically modified E.coli must not leave the biofilm because they could have unintended environmental or health consequences. In order to avoid collateral damage, we implemented two barriers to prevent the genetically modified bacteria to spread outside the biofilm.</p>
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<p>The first barrier is a physical one: the biofilm is contained inside a membrane having small porous that the bacteria cannot pass through because of its size. The biocompatible membrane made of aluminum oxide and covered by a polymer have porous of 0.2 micrometers which Is smaller than the size of the bacteria composing the biofilm. The second barrier is a biological one that we integrated in the genetically modified E.coli forming the biofilm. Indeed, we worked on a kill switch that is cryosensitive. The bacteria should die when they leave the prosthesis and go in an environment that has a temperature lower than 37°C. In theory the kill switch should work when the temperature is lower than 22°C. The membrane and the kill switch confine the bacteria inside our device, so they won’t spread inside the human body or the environment.</p>
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<div class="block full">
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<img src="">
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<div class="legend">This video explains in simple terms how the kill switch works. He featured to bacteria in the biofilm that explain the objective of this biological barrier. </div>
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<div class="block separator-mark"></div>
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<div class="block title" id="LabSafety">
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<h1>LAB SAFETY: <h1><h4>A time line to understand the lab worker's daily life</h4>
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<div class="block full">
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<img src="https://static.igem.org/mediawiki/2018/7/7d/T--Pasteur_Paris--LabSafety.png">
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<div class="legend"><b>Figure 1:</b> with this interactive timeline, we want to explain the main lab safety rules which are applied every day in labs!</div>
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</div>
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<div class="block two-third">
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<p>This role-playing shows that, during one day as a lab worker, you may have to work in laboratories with different biosafety levels. Then, a classification exists which takes into consideration the organism used, the equipment practices and procedures you have to follow. Mainly, BSL-1 and BSL-2 are used for research. However, in some important cases, you could use BSL-3 lab and more. An important point is that rules are cumulative, it means that in BSL-2 you have to apply BSL-1 rules and BSL-2 rules.  </p>
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</div>
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<div class="block full">
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<h3 style="text-align: left; color: #e90000;">BSL-1: a basic laboratory with a biosafety level 1</h3>
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<p>This laboratory is used for basic teaching and research. In this lab, you have to use good microbiological techniques (GMT). GMT rules should be applied every time you work with any microorganism, regardless the biosafety level. No safety equipment is required <b>except an open bench work</b>. No isolation of laboratory is required.</p>
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<h3 style="text-align: left; color: #e90000;">BSL-2: a basic laboratory with a biosafety level 2      </h3>
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<p>This laboratory is used for primary health services, diagnostic services and research. As a BSL-1 lab, you have to adopt GMT practices but also wear <b>protective clothing</b>. In this lab, you will see the biohazard sign. With a bench work, in this lab, you must have a class II BSC: biological safety cabinet, a protection against potential aerosols. No isolation of laboratory is required.</p>
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<h3 style="text-align: left; color: #e90000;">BSL-3: the containment laboratory with a biosafety level 3</h3>
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<p>This laboratory is used for special diagnostic services and research. You must wear special clothing. This lab is controlled for its access, and has a directional airflow. As BSL-2 lab, this lab requires a class III BSC and other primary devices for special activities. Thus, isolation of laboratory is required.</p>
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<h3 style="text-align: left; color: #e90000;">BSL-4: the maximum containment laboratory with a biosafety level 4</h3>
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<p>This laboratory is a dangerous pathogen unit. In this lab, you have an airlock entry, a shower exit and special waste disposal. Safety equipment is composed of a class III BSC with a double ended autoclave. Moreover, the air is always filtered. Thus, isolation of laboratory is required.<br>
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In this lab, you must pay attention to personnel safety monitoring capability: indeed, you must have a closed-circuit television and a two-way communication for example. </p>
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<div class="block title" id="References">
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<h1>REFERENCES</h1>
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<p>World Health Organization "Laboratory Biosafety Manual. Third Edition.", Geneva (2004),http://www.who.int/csr/resources/publications/biosafety/Biosafety7.pdf</p>
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Revision as of 20:00, 18 September 2018

""

SAFETY FOR THE ENVIRONMENT

A major concern of our project is to prevent any risk for the environment and the human body. The genetically modified E.coli must not leave the biofilm because they could have unintended environmental or health consequences. In order to avoid collateral damage, we implemented two barriers to prevent the genetically modified bacteria to spread outside the biofilm.

The first barrier is a physical one: the biofilm is contained inside a membrane having small porous that the bacteria cannot pass through because of its size. The biocompatible membrane made of aluminum oxide and covered by a polymer have porous of 0.2 micrometers which Is smaller than the size of the bacteria composing the biofilm. The second barrier is a biological one that we integrated in the genetically modified E.coli forming the biofilm. Indeed, we worked on a kill switch that is cryosensitive. The bacteria should die when they leave the prosthesis and go in an environment that has a temperature lower than 37°C. In theory the kill switch should work when the temperature is lower than 22°C. The membrane and the kill switch confine the bacteria inside our device, so they won’t spread inside the human body or the environment.

This video explains in simple terms how the kill switch works. He featured to bacteria in the biofilm that explain the objective of this biological barrier.

LAB SAFETY:

A time line to understand the lab worker's daily life

Figure 1: with this interactive timeline, we want to explain the main lab safety rules which are applied every day in labs!

This role-playing shows that, during one day as a lab worker, you may have to work in laboratories with different biosafety levels. Then, a classification exists which takes into consideration the organism used, the equipment practices and procedures you have to follow. Mainly, BSL-1 and BSL-2 are used for research. However, in some important cases, you could use BSL-3 lab and more. An important point is that rules are cumulative, it means that in BSL-2 you have to apply BSL-1 rules and BSL-2 rules.

BSL-1: a basic laboratory with a biosafety level 1

This laboratory is used for basic teaching and research. In this lab, you have to use good microbiological techniques (GMT). GMT rules should be applied every time you work with any microorganism, regardless the biosafety level. No safety equipment is required except an open bench work. No isolation of laboratory is required.

BSL-2: a basic laboratory with a biosafety level 2

This laboratory is used for primary health services, diagnostic services and research. As a BSL-1 lab, you have to adopt GMT practices but also wear protective clothing. In this lab, you will see the biohazard sign. With a bench work, in this lab, you must have a class II BSC: biological safety cabinet, a protection against potential aerosols. No isolation of laboratory is required.

BSL-3: the containment laboratory with a biosafety level 3

This laboratory is used for special diagnostic services and research. You must wear special clothing. This lab is controlled for its access, and has a directional airflow. As BSL-2 lab, this lab requires a class III BSC and other primary devices for special activities. Thus, isolation of laboratory is required.

BSL-4: the maximum containment laboratory with a biosafety level 4

This laboratory is a dangerous pathogen unit. In this lab, you have an airlock entry, a shower exit and special waste disposal. Safety equipment is composed of a class III BSC with a double ended autoclave. Moreover, the air is always filtered. Thus, isolation of laboratory is required.
In this lab, you must pay attention to personnel safety monitoring capability: indeed, you must have a closed-circuit television and a two-way communication for example.

REFERENCES

World Health Organization "Laboratory Biosafety Manual. Third Edition.", Geneva (2004),http://www.who.int/csr/resources/publications/biosafety/Biosafety7.pdf