Difference between revisions of "Team:UiOslo Norway/Attributions"

Line 36: Line 36:
  
 
<h4>Background</h4>
 
<h4>Background</h4>
<p>At the University of Oslo, iGEM is offered as a two-semester course (course code: <a href="https://www.uio.no/studier/emner/matnat/ibv/MBV4910IGEM/">MBV4910IGEM</a>) and is evaluated on pass or fail basis. There are no supporting course materials for this course as the course consists of a student-driven interdisciplinary project in synthetic biology. The course starts in March and finishes in October after the Giant Jamboree. We started brainstorming in the beginning of March and had a clear project idea at the end of March. In April, we started planning the lab work and experiments. In late June we received all the necessary components we had ordered; thus we were able to start working in the lab.</p>
+
<p>At the University of Oslo, iGEM is offered as a two-semester course (course code: <a href="https://www.uio.no/studier/emner/matnat/ibv/MBV4910IGEM/">MBV4910IGEM</a>) and is evaluated on a pass or fail basis. There are no supporting course materials for this course as the course consists of a student-driven interdisciplinary project in synthetic biology. The course starts in March and finishes in October after the Giant Jamboree. We started brainstorming in the beginning of March and had a clear project idea at the end of March. In April, we started planning the lab work and experiments. In late June we received all the necessary components we had ordered; thus we were able to start working in the lab.</p>
  
 
<p>On this page, we would like to thank everyone who believed in our project and help us in the execution. We could not have come this far without the contribution of the people and companies listed below.</p>
 
<p>On this page, we would like to thank everyone who believed in our project and help us in the execution. We could not have come this far without the contribution of the people and companies listed below.</p>
Line 61: Line 61:
  
 
<!-- STOP -->
 
<!-- STOP -->
<h4>Lab work</h4>
+
<h4>Lab support</h4>
 
<p style="text-align:center;">Thank you for your aid in the lab, and for your help with matters both practical and theoretical</p>
 
<p style="text-align:center;">Thank you for your aid in the lab, and for your help with matters both practical and theoretical</p>
 
<div class="row">
 
<div class="row">
Line 70: Line 70:
 
     <p><strong>Ragnhild Eskeland</strong></br>
 
     <p><strong>Ragnhild Eskeland</strong></br>
 
     Provided us with expert feedback on CRISPR and guide RNA</p>
 
     Provided us with expert feedback on CRISPR and guide RNA</p>
 
    <p><strong>Sandra Lopez-Aviles</strong></br>
 
    Provided us with the yeast cells necessary for a proof-of-concept</p>
 
  
 
     <p><strong>National Reference Laboratory for Medical Mycology</strong></br>
 
     <p><strong>National Reference Laboratory for Medical Mycology</strong></br>
Line 79: Line 76:
  
 
   <div class="six columns">
 
   <div class="six columns">
    <p><strong>Johannes Landskron</strong></br>
 
    Provided us with access to a flowcytometer, and helped us set it up for the Interlab study</p>
 
 
 
     <p><strong>Beata Nadratowska-Wesolowska</strong></br>
 
     <p><strong>Beata Nadratowska-Wesolowska</strong></br>
 
     Provided us with expert feedback on CRISPR and guide RNA</p>
 
     Provided us with expert feedback on CRISPR and guide RNA</p>
  
     <p><strong>Bård Enger Mathiesen</strong></br>
+
     <p><strong>Sandra Lopez-Aviles</strong></br>
     Technical lab assistance, especially with freeze-drying techniques</p>
+
     Provided us with the yeast cells necessary for a proof-of-concept</p>
  
 
     <p><strong>The Linke Group</strong></br>
 
     <p><strong>The Linke Group</strong></br>
Line 94: Line 88:
 
</div>
 
</div>
  
<!-- STOP -->
+
<h4>Difficult technique support</h4>
 +
<div class="row">
 +
  <div class="six columns">
 +
    <p><strong>Bård Enger Mathiesen</strong></br>
 +
    Technical lab assistance, especially with freeze-drying techniques</p>
 +
  </div>
 +
 
 +
  <div class="six columns">
 +
    <p><strong>Johannes Landskron</strong></br>
 +
    Provided us with access to a flowcytometer, and helped us set it up for the Interlab study</p>
 +
  </div>
 +
</div>
 +
 
 +
<!-- HP -->
 
<h4>Human Practices</h4>
 
<h4>Human Practices</h4>
 
<p style="text-align:center;">Thank you for helping us reach out to the community</p>
 
<p style="text-align:center;">Thank you for helping us reach out to the community</p>
Line 111: Line 118:
 
</div>
 
</div>
  
<!-- STOP -->
+
<!-- Project Support -->
 
<h4>Project Support</h4>
 
<h4>Project Support</h4>
 
<p style="text-align:center;">Thank you for your assistance with matters small and large, and for keeping us in motion</p>
 
<p style="text-align:center;">Thank you for your assistance with matters small and large, and for keeping us in motion</p>
Line 119: Line 126:
 
     Helped us with booking flight and accomodation, as well as shipping items for sequencing</p>
 
     Helped us with booking flight and accomodation, as well as shipping items for sequencing</p>
  
     <p><strong>Ana Sifuentes</strong></br>
+
     <p><strong>Arnab Sarkar</strong></br>
     When we had trouble with the Wiki, Ana was there to aid us and answer our questions</p>
+
     Created a 3-D printed prototype of our detection kit.</p>
  
 
     <p><strong>Katrine Kjenne</strong></br>
 
     <p><strong>Katrine Kjenne</strong></br>
Line 127: Line 134:
  
 
   <div class="six columns">
 
   <div class="six columns">
    <p><strong>Abigail Sison</strong></br>
 
    Our point-of-contact with HQ</p>
 
  
 
     <p><strong>Bruno A. Dzogovic</strong></br>
 
     <p><strong>Bruno A. Dzogovic</strong></br>
Line 135: Line 140:
 
     <p><strong>Heikki Sørum</strong></br>
 
     <p><strong>Heikki Sørum</strong></br>
 
     Greatly assisted us with making 3D-structures of our enzymes, and helped develop our prototype</p>
 
     Greatly assisted us with making 3D-structures of our enzymes, and helped develop our prototype</p>
 +
 +
    <p><strong>Nadeem Joudeh</strong></br>
 +
    Made the animation of our detection kit for our presentation.</p>
 +
 
   </div>
 
   </div>
 
</div>
 
</div>
 +
  
 
<!-- STOP -->
 
<!-- STOP -->
<h4>Presentation feedback</h4>
+
<h4>Presentation feedback and coaching</h4>
 
<p style="text-align:center;">Thank you for your honest feedback and great advice.</p>
 
<p style="text-align:center;">Thank you for your honest feedback and great advice.</p>
 
<div class="row">
 
<div class="row">
 
   <div class="six columns">
 
   <div class="six columns">
 +
    <p><strong>Åslaug Brynhildsen</strong></br>
 +
    Gave us practical tips on how to improve our presentation skills and body language</p>
 +
 
     <p><strong>Anne Greulich</strong></br>
 
     <p><strong>Anne Greulich</strong></br>
 
     Provided us with feedback and advice on how to improve our presentation</p>
 
     Provided us with feedback and advice on how to improve our presentation</p>
  
    <p><strong>Thomas Trunk</strong></br>
 
    Helped improving our presentation </p>
 
 
   </div>
 
   </div>
  
Line 153: Line 164:
 
     <p><strong>Yuri van Ekelenburg</strong></br>
 
     <p><strong>Yuri van Ekelenburg</strong></br>
 
     Helped improving our presentation </p>
 
     Helped improving our presentation </p>
 +
 +
    <p><strong>Thomas Trunk</strong></br>
 +
    Helped improving our presentation </p>
 +
  </div>
 +
</div>
 +
 +
<!-- HQ Support -->
 +
<h4>HQ Support</h4>
 +
<p style="text-align:center;">Thank you for helping us reach out to the community</p>
 +
<div class="row">
 +
  <div class="six columns">
 +
    <p><strong>Abigail Sison</strong></br>
 +
    Our point-of-contact with HQ</p>>
 +
 +
  </div>
 +
 +
  <div class="six columns">
 +
    <p><strong>Ana Sifuentes</strong></br>
 +
    When we had trouble with the Wiki, Ana was there to aid us and answer our questions</p>
 +
 
   </div>
 
   </div>
 
</div>
 
</div>
  
 
<!-- STOP -->
 
<!-- STOP -->
<h4>Miscellaneous</h4>
+
<h4>Other resources</h4>
<!-- <p style="text-align:center;"></p> -->
+
<p style="text-align:center;">None of our team-members are particularily skilled in either programming or design. Because of this, making a wiki and graphical layout from scratch turned out to be a huge challenge for us.
 +
However, with the many free resources on the world wide web and many, many hours of work, we did it. We are proud of our results, and hope to share them with other iGEM teams. Our code is free to be copied, and a detailed run-down will be posted at a later time.</p>
 
<div class="row">
 
<div class="row">
 
   <div class="six columns">
 
   <div class="six columns">

Revision as of 11:27, 12 October 2018

Attributions

Student members

All student team members performed outstanding work and showed interest and dedication to the project. As we were a rather small team we did not have strict division of roles and many times we worked all together to accomplish certain parts of our project.

Inspiration

Our project was inspired by the works of iGEM Peking 2015 and iGEM UiOslo_Norway 2016. Our decision to detect vulvovaginal Candida albicans stemmed from the public lack of knowledge concerning the subject, and increasing antimycotic resistance.

Background

At the University of Oslo, iGEM is offered as a two-semester course (course code: MBV4910IGEM) and is evaluated on a pass or fail basis. There are no supporting course materials for this course as the course consists of a student-driven interdisciplinary project in synthetic biology. The course starts in March and finishes in October after the Giant Jamboree. We started brainstorming in the beginning of March and had a clear project idea at the end of March. In April, we started planning the lab work and experiments. In late June we received all the necessary components we had ordered; thus we were able to start working in the lab.

On this page, we would like to thank everyone who believed in our project and help us in the execution. We could not have come this far without the contribution of the people and companies listed below.

Work done by others

Instructors

Without whom this project would not have been possible

DIRK LINKE
Primary Instructor, course leader, and head of the Linke Group

KIRSTEN B. HARALDSEN
Advisor and project support. Helped us with outreach and human practises.

ATHANASIOS SARAGLIADIS
Instructor, provided us with invaluable help and advice during our labwork. We are forever grateful for your help

Lab support

Thank you for your aid in the lab, and for your help with matters both practical and theoretical

Marcella O. Rydmark
Assisted us with difficult techniques, and protein purification

Ragnhild Eskeland
Provided us with expert feedback on CRISPR and guide RNA

National Reference Laboratory for Medical Mycology
Many thanks to Cecilie T. Andersen and Lonny M. Kløvfjell for giving us a tour of the laboratory, and general advice concerning yeasts

Beata Nadratowska-Wesolowska
Provided us with expert feedback on CRISPR and guide RNA

Sandra Lopez-Aviles
Provided us with the yeast cells necessary for a proof-of-concept

The Linke Group
Thank you for your patience and warm welcome to the labspace

Difficult technique support

Bård Enger Mathiesen
Technical lab assistance, especially with freeze-drying techniques

Johannes Landskron
Provided us with access to a flowcytometer, and helped us set it up for the Interlab study

Human Practices

Thank you for helping us reach out to the community

Åslaug Brynhildsen
Aided us with public outreach, and how to communicate with media

Elina Melteig
Aided us with public outreach, and how to communicate with media

Project Support

Thank you for your assistance with matters small and large, and for keeping us in motion

Steinar Mortensen
Helped us with booking flight and accomodation, as well as shipping items for sequencing

Arnab Sarkar
Created a 3-D printed prototype of our detection kit.

Katrine Kjenne
Design our logo for us

Bruno A. Dzogovic
Helped is with the initial process of the Wiki

Heikki Sørum
Greatly assisted us with making 3D-structures of our enzymes, and helped develop our prototype

Nadeem Joudeh
Made the animation of our detection kit for our presentation.

Presentation feedback and coaching

Thank you for your honest feedback and great advice.

Åslaug Brynhildsen
Gave us practical tips on how to improve our presentation skills and body language

Anne Greulich
Provided us with feedback and advice on how to improve our presentation

Yuri van Ekelenburg
Helped improving our presentation

Thomas Trunk
Helped improving our presentation

HQ Support

Thank you for helping us reach out to the community

Abigail Sison
Our point-of-contact with HQ

>

Ana Sifuentes
When we had trouble with the Wiki, Ana was there to aid us and answer our questions

Other resources

None of our team-members are particularily skilled in either programming or design. Because of this, making a wiki and graphical layout from scratch turned out to be a huge challenge for us. However, with the many free resources on the world wide web and many, many hours of work, we did it. We are proud of our results, and hope to share them with other iGEM teams. Our code is free to be copied, and a detailed run-down will be posted at a later time.

w3schools
w3schools.com is a free resource for tutorials and a reference guide for web development. We wrote our wiki by ourselves, and this free resource helped us a lot

Skeleton
Skeleton is an open-source boilerplate written by Dave Gamache. It has helped us maintain the typography and scaling of elements on our website. With only ~400 lines of code, it's light weight makes it perfect for smaller projects like this. You can find more information at getskeleton.com

THANK YOU!