Difference between revisions of "Team:NTHU Formosa/InterLab"

Line 62: Line 62:
 
<p class="w3-center" style="font-size:40px;">Overall To-Do List</p><br>
 
<p class="w3-center" style="font-size:40px;">Overall To-Do List</p><br>
 
<br>
 
<br>
     <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 1:OD<sub>600</sub> Reference point - LUDOX Protocol</p><br>
+
     <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 1:OD<sub>600</sub> Reference point - LUDOX Protocol</p>
 +
   
 +
    <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p>
 +
   
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Record settings for standard measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Record settings for standard measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Record measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Record measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">3.Fill out corresponding Excel sheet</p><br>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">3.Fill out corresponding Excel sheet</p><br>
     <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 2:​Particle Standard Curve - Microsphere Protocol</p><br>
+
     <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 2:​Particle Standard Curve - Microsphere Protocol</p>
 +
   
 +
    <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p>
 +
   
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Prepare Microsphere Stock Solution</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Prepare Microsphere Stock Solution</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilution</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilution</p>
Line 72: Line 78:
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br>
     <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 3:Fluorescence standard curve - Fluorescein Protocol </p><br>
+
     <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 3:Fluorescence standard curve - Fluorescein Protocol </p>
 +
   
 +
    <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p>
 +
   
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Resuspend and dilute fluorescein</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Resuspend and dilute fluorescein</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilutions</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilutions</p>
Line 78: Line 87:
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br>
 
     <p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br>
     <p class="w3-center" style="font-size:25px;">Cell Measurement protocol</p><br>
+
     <p class="w3-justify" style="font-size:25px;padding-left:150px">Cell Measurement protocol</p>
    <p class="w3-justify" style="font-size:25px;padding-left:180px;">Day 1:</p>
+
<p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p>
     <p class="w3-justify" style="font-size:20px;padding-left:240px">Transform E.Coli DH5α with plasmids (all in pSB1C3)</p><br>
+
     <p class="w3-justify" style="font-size:20px;padding-left:240px">Day 1:Transform E.Coli DH5α with plasmids (all in pSB1C3)</p>
 +
   
 +
 
 +
    <p class="w3-justify" style="font-size:20px;padding-left:240px">Day 2:pick 2 colonies per plate (5 mL LB medium + Chloramphenicol.  </p>
 
      
 
      
     <p class="w3-justify" style="font-size:25px;padding-left:180px;">Day 2:</p>
+
     <p class="w3-justify" style="font-size:20px;padding-left:296px;">Grow 16-18 hours @ 37 C and 220 rpm</p>
    <p class="w3-justify" style="font-size:20px;padding-left:240px">pick 2 colonies per plate (5 mL LB medium + Chloramphenicol. Grow 16-18 hours @ 37 C and 220 rpm</p><br>
+
 
      
 
      
     <p class="w3-justify" style="font-size:25px;padding-left:180px;">Day 3:</p>
+
 
    <p class="w3-justify" style="font-size:20px;padding-left:240px">
+
     <p class="w3-justify" style="font-size:20px;padding-left:240px">Day 3:
 
       Dilution cultures in LB+Chloramphenicol <br>
 
       Dilution cultures in LB+Chloramphenicol <br>
       Measure OD<sub>600</sub><br>
+
       <p class="w3-justify" style="font-size:20px;padding-left:304px;">Measure OD<sub>600</sub><br></p>
       Further dilute<br>
+
       <p class="w3-justify" style="font-size:20px;padding-left:304px;">Further dilute<br></p>
       Incubate<br>
+
       <p class="w3-justify" style="font-size:20px;padding-left:304px;">Incubate<br></p>
       Abs600 and fluorescence measurement<br>
+
       <p class="w3-justify" style="font-size:20px;padding-left:304px;">Abs600 and fluorescence measurement<br></p>
       Record measurements<br>
+
       <p class="w3-justify" style="font-size:20px;padding-left:304px;">Record measurements<br></p>
       Fill out corresponding Excel sheet<br>
+
       <p class="w3-justify" style="font-size:20px;padding-left:304px;">Fill out corresponding Excel sheet<br></p>
 
        
 
        
 
        
 
        
Line 99: Line 110:
 
     </p><br>
 
     </p><br>
 
          
 
          
     <p class="w3-center" style="font-size:30px;">Protocol:Colony Forming Units per 0.1 OD<sub>600</sub>  E.coli cultures</p>
+
     <p class="w3-justify" style="font-size:25px;padding-left:150px">Protocol:Colony Forming Units per 0.1 OD<sub>600</sub>  E.coli cultures</p>
 +
  <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p>
 +
      <p class="w3-justify" style="font-size:25px;padding-left:150px">✔ To see the results, <a href="https://docs.google.com/spreadsheets/d/1GZ5xY4s5LGc7funlSDGDNl71Atd4TWjkDY37gka57aA/edit#gid=211336931"><src="https://docs.google.com/spreadsheets/d/1GZ5xY4s5LGc7funlSDGDNl71Atd4TWjkDY37gka57aA/edit#gid=211336931">click here</a>.</p>
 
    
 
    
  

Revision as of 08:32, 10 October 2018

IGEM 2018 Interlab Study

Overall To-Do List



✔ Calibration 1:OD600 Reference point - LUDOX Protocol


1.Record settings for standard measurements

2.Record measurements

3.Fill out corresponding Excel sheet


✔ Calibration 2:​Particle Standard Curve - Microsphere Protocol


1.Prepare Microsphere Stock Solution

2.Serial dilution

3.Measure Abs600 of all samples in instrument

4.Record measurements

5.Fill out corresponding Excel sheet


✔ Calibration 3:Fluorescence standard curve - Fluorescein Protocol


1.Resuspend and dilute fluorescein

2.Serial dilutions

3.Measure fluorescence of all samples in instrument

4.Record measurements

5.Fill out corresponding Excel sheet


✔ Cell Measurement protocol


Day 1:Transform E.Coli DH5α with plasmids (all in pSB1C3)

Day 2:pick 2 colonies per plate (5 mL LB medium + Chloramphenicol.

Grow 16-18 hours @ 37 C and 220 rpm

Day 3: Dilution cultures in LB+Chloramphenicol

Measure OD600

Further dilute

Incubate

Abs600 and fluorescence measurement

Record measurements

Fill out corresponding Excel sheet


✔ Protocol:Colony Forming Units per 0.1 OD600 E.coli cultures


✔ To see the results, click here.