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<p class="w3-center" style="font-size:40px;">Overall To-Do List</p><br> | <p class="w3-center" style="font-size:40px;">Overall To-Do List</p><br> | ||
<br> | <br> | ||
− | <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 1:OD<sub>600</sub> Reference point - LUDOX Protocol</p><br> | + | <p class="w3-justify" style="font-size:25px;padding-left:150px;">✔ Calibration 1:OD<sub>600</sub> Reference point - LUDOX Protocol</p> |
+ | |||
+ | <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p> | ||
+ | |||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Record settings for standard measurements</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Record settings for standard measurements</p> | ||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Record measurements</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Record measurements</p> | ||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">3.Fill out corresponding Excel sheet</p><br> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">3.Fill out corresponding Excel sheet</p><br> | ||
− | <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 2:Particle Standard Curve - Microsphere Protocol</p><br> | + | <p class="w3-justify" style="font-size:25px;padding-left:150px;">✔ Calibration 2:Particle Standard Curve - Microsphere Protocol</p> |
+ | |||
+ | <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p> | ||
+ | |||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Prepare Microsphere Stock Solution</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Prepare Microsphere Stock Solution</p> | ||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilution</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilution</p> | ||
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<p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p> | ||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br> | ||
− | <p class="w3-justify" style="font-size:25px;padding-left:150px;">Calibration 3:Fluorescence standard curve - Fluorescein Protocol </p><br> | + | <p class="w3-justify" style="font-size:25px;padding-left:150px;">✔ Calibration 3:Fluorescence standard curve - Fluorescein Protocol </p> |
+ | |||
+ | <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p> | ||
+ | |||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Resuspend and dilute fluorescein</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">1.Resuspend and dilute fluorescein</p> | ||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilutions</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">2.Serial dilutions</p> | ||
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<p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">4.Record measurements</p> | ||
<p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br> | <p class="w3-justify" style="font-size:20px;padding-left:240px;">5.Fill out corresponding Excel sheet</p><br> | ||
− | <p class="w3- | + | <p class="w3-justify" style="font-size:25px;padding-left:150px">✔ Cell Measurement protocol</p> |
− | + | <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p> | |
− | <p class="w3-justify" style="font-size:20px;padding-left:240px">Transform E.Coli DH5α with plasmids (all in pSB1C3)</p>< | + | <p class="w3-justify" style="font-size:20px;padding-left:240px">Day 1:Transform E.Coli DH5α with plasmids (all in pSB1C3)</p> |
+ | |||
+ | |||
+ | <p class="w3-justify" style="font-size:20px;padding-left:240px">Day 2:pick 2 colonies per plate (5 mL LB medium + Chloramphenicol. </p> | ||
− | <p class="w3-justify" style="font-size: | + | <p class="w3-justify" style="font-size:20px;padding-left:296px;">Grow 16-18 hours @ 37 C and 220 rpm</p> |
− | + | ||
− | <p class="w3-justify" style="font-size: | + | |
− | + | <p class="w3-justify" style="font-size:20px;padding-left:240px">Day 3: | |
Dilution cultures in LB+Chloramphenicol <br> | Dilution cultures in LB+Chloramphenicol <br> | ||
− | Measure OD<sub>600</sub><br> | + | <p class="w3-justify" style="font-size:20px;padding-left:304px;">Measure OD<sub>600</sub><br></p> |
− | Further dilute<br> | + | <p class="w3-justify" style="font-size:20px;padding-left:304px;">Further dilute<br></p> |
− | Incubate<br> | + | <p class="w3-justify" style="font-size:20px;padding-left:304px;">Incubate<br></p> |
− | Abs600 and fluorescence measurement<br> | + | <p class="w3-justify" style="font-size:20px;padding-left:304px;">Abs600 and fluorescence measurement<br></p> |
− | Record measurements<br> | + | <p class="w3-justify" style="font-size:20px;padding-left:304px;">Record measurements<br></p> |
− | Fill out corresponding Excel sheet<br> | + | <p class="w3-justify" style="font-size:20px;padding-left:304px;">Fill out corresponding Excel sheet<br></p> |
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</p><br> | </p><br> | ||
− | <p class="w3- | + | <p class="w3-justify" style="font-size:25px;padding-left:150px">✔ Protocol:Colony Forming Units per 0.1 OD<sub>600</sub> E.coli cultures</p> |
+ | <p class="w3-justify" style="font-size:20px;padding-left:150px"><br></p> | ||
+ | <p class="w3-justify" style="font-size:25px;padding-left:150px">✔ To see the results, <a href="https://docs.google.com/spreadsheets/d/1GZ5xY4s5LGc7funlSDGDNl71Atd4TWjkDY37gka57aA/edit#gid=211336931"><src="https://docs.google.com/spreadsheets/d/1GZ5xY4s5LGc7funlSDGDNl71Atd4TWjkDY37gka57aA/edit#gid=211336931">click here</a>.</p> | ||
Revision as of 08:32, 10 October 2018
IGEM 2018 Interlab Study
Overall To-Do List
✔ Calibration 1:OD600 Reference point - LUDOX Protocol
1.Record settings for standard measurements
2.Record measurements
3.Fill out corresponding Excel sheet
✔ Calibration 2:Particle Standard Curve - Microsphere Protocol
1.Prepare Microsphere Stock Solution
2.Serial dilution
3.Measure Abs600 of all samples in instrument
4.Record measurements
5.Fill out corresponding Excel sheet
✔ Calibration 3:Fluorescence standard curve - Fluorescein Protocol
1.Resuspend and dilute fluorescein
2.Serial dilutions
3.Measure fluorescence of all samples in instrument
4.Record measurements
5.Fill out corresponding Excel sheet
✔ Cell Measurement protocol
Day 1:Transform E.Coli DH5α with plasmids (all in pSB1C3)
Day 2:pick 2 colonies per plate (5 mL LB medium + Chloramphenicol.
Grow 16-18 hours @ 37 C and 220 rpm
Day 3:
Dilution cultures in LB+Chloramphenicol
Measure OD600
Further dilute
Incubate
Abs600 and fluorescence measurement
Record measurements
Fill out corresponding Excel sheet
✔ Protocol:Colony Forming Units per 0.1 OD600 E.coli cultures
✔ To see the results,