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                                 <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
 
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                         <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
 
                         <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
 
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             <div class="word">Basic Parts</div>
 
             <div class="word">Basic Parts</div>
 
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             <section id="Basic_Parts" class="js-scroll-step">
 
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                     Basic Parts
 
                     Basic Parts
 
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                 <p class="indent">Basic Parts
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                 <p class="indent">This year we have designed eleven basic parts mostly from TDP protein systems and Kai ABC systems. <span><a class="click_here" href="http://parts.igem.org/Part:BBa_K2623008">BBa_K2623008</a></span> is our favorite basic part, which is the core part of the TDP circuit. This part contains the coding region of the Hypsibius dujardini (Water bear) (Macrobiotus dujardini) CAHS gene. Cytosolic abundant heat soluble proteins acts as a molecular shield in water-deficient condition. Tardigrade-specific intrinsically disordered proteins (TDPs) are essential for desiccation tolerance by forming non-crystalline amorphous solids upon desiccation, and this vitrified state mirrors their protective capabilities.
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                    This year we have designed eleven basic parts mostly from the Kai ABC systems. <a href="http://parts.igem.org/Part:BBa_K2623003">BBa_K2623003</a> is our favorite basic part, which is the core part of the Kai circuit, acting as a hexamer. This part can be both auto phosphorylated and dephosphorylated, and it can achieve about 24 hours of phosphorylation-dephosphorylation oscillation under the regulation of KaiA and KaiB.
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                     <tr>
 
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                         <th>Favorite</th>
 
                         <th>Favorite</th>
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                     <tr>
 
                     <tr>
 
                         <td>R</td>
 
                         <td>R</td>
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                         <td><a href="http://parts.igem.org/Part:BBa_K2623003">BBa_K2623003</a></td>
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                         <td><a href="http://parts.igem.org/Part:BBa_K2623008">BBa_K2623008</a></td>
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                         <td>KaiC</td>
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                         <td>CAHS</td>
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                         <td>KaiC coding region</td>
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                         <td>CAHS coding region</td>
 
                         <td>Coding</td>
 
                         <td>Coding</td>
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                         <td>1560 bp</td>
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                         <td>714 bp</td>
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                         <td>Xinyi Ren</td>
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                         <td>Weizhao Li</td>
 
                     </tr>
 
                     </tr>
 
                     <tr>
 
                     <tr>
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                         <td>309 bp</td>
 
                         <td>309 bp</td>
 
                         <td>Yuhan Qin</td>
 
                         <td>Yuhan Qin</td>
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                    </tr>
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                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623003">BBa_K2623003</a></td>
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                        <td>KaiC</td>
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                        <td>KaiC coding region</td>
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                        <td>Coding</td>
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                        <td>1560 bp</td>
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                        <td>Xinyi Ren</td>
 
                     </tr>
 
                     </tr>
 
                     <tr>
 
                     <tr>
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                         <td>Yingming Zhu</td>
 
                         <td>Yingming Zhu</td>
 
                     </tr>
 
                     </tr>
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                     <tr>
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−
                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623008">BBa_K2623008</a></td>
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                        <td>CAHS</td>
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                        <td>CAHS coding region</td>
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−
                        <td>Coding</td>
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−
                        <td>714 bp</td>
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                        <td>Weizhao Li</td>
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                    </tr>
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                     <tr>
 
                     <tr>
 
                         <td></td>
 
                         <td></td>
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                         <td><a href="http://parts.igem.org/Part:BBa_K2623040">BBa_K2623040</a></td>
 
                         <td><a href="http://parts.igem.org/Part:BBa_K2623040">BBa_K2623040</a></td>
 
                         <td>OmpA leader</td>
 
                         <td>OmpA leader</td>
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                         <td>OmpA leader sequence</td>
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                         <td>OmpA leader sequence </td>
 
                         <td>Coding</td>
 
                         <td>Coding</td>
 
                         <td>72 bp</td>
 
                         <td>72 bp</td>
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                         <td><a href="http://parts.igem.org/Part:BBa_K2623027">BBa_K2623027</a></td>
 
                         <td><a href="http://parts.igem.org/Part:BBa_K2623027">BBa_K2623027</a></td>
 
                         <td>NG7</td>
 
                         <td>NG7</td>
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                         <td class="space">siRNA with C/Dbox RNA structure to bind with L7Ae (BBa_K2623026)</td>
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                         <td>siRNA with C/D<sub>box</sub> RNA structure to bind with L7Ae (<a href="http://parts.igem.org/Part:BBa_K2623026">BBa_K2623026</a>)</td>
 
                         <td>Composite</td>
 
                         <td>Composite</td>
 
                         <td>1447 bp</td>
 
                         <td>1447 bp</td>
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                     </tr>
 
                     </tr>
 
                 </table>
 
                 </table>
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                </div>
 
             </section>
 
             </section>
 
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         </div>

Latest revision as of 09:11, 17 October 2018

Team:XMU-China/Measurement - 2018.igem.org

Basic Parts
Basic Parts

This year we have designed eleven basic parts mostly from TDP protein systems and Kai ABC systems. BBa_K2623008 is our favorite basic part, which is the core part of the TDP circuit. This part contains the coding region of the Hypsibius dujardini (Water bear) (Macrobiotus dujardini) CAHS gene. Cytosolic abundant heat soluble proteins acts as a molecular shield in water-deficient condition. Tardigrade-specific intrinsically disordered proteins (TDPs) are essential for desiccation tolerance by forming non-crystalline amorphous solids upon desiccation, and this vitrified state mirrors their protective capabilities.

Favorite Register Name Code used in Lab Description Types Lenth Designer
R BBa_K2623008 CAHS CAHS coding region Coding 714 bp Weizhao Li
BBa_K2623001 KaiA KaiA coding region Coding 852 bp Yi Lin
BBa_K2623002 KaiB KaiB coding region Coding 309 bp Yuhan Qin
BBa_K2623003 KaiC KaiC coding region Coding 1560 bp Xinyi Ren
BBa_K2623004 SasA SasA coding region Coding 1167 bp Yi Lin
BBa_K2623005 CikA CikA coding region Coding 2265 bp Yuhan Qin
BBa_K2623006 RpaA RpaA coding region Coding 753 bp Xinyi Ren
BBa_K2623007 SAHS SAHS coding region Coding 510 bp Yingming Zhu
BBa_K2623009 pKaiBC pKaiBC promoter Regulatory 89 bp Gezhi Xiao
BBa_K2623040 OmpA leader OmpA leader sequence Coding 72 bp Niangui Cai
BBa_K2623027 NG7 siRNA with C/Dbox RNA structure to bind with L7Ae (BBa_K2623026) Composite 1447 bp Yunyun Hu
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