Difference between revisions of "Team:XMU-China/Basic Part"

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{{XMU-China}}
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<div class="column full_size judges-will-not-evaluate">
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<h3>★  ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2018.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2018.igem.org/Judging/Awards"> award listed below</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2018.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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<h1>Basic Parts</h1>
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<p>
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A <b>basic part</b> is a functional unit of DNA that cannot be subdivided into smaller component parts. <a href="http://parts.igem.org/wiki/index.php/Part:BBa_R0051">BBa_R0051</a> is an example of a basic part, a promoter regulated by lambda cl.
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</p>
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<p>Most genetically-encoded functions have not yet been converted to BioBrick parts. Thus, there are <b>many</b> opportunities to find new, cool, and important genetically encoded functions, and refine and convert the DNA encoding these functions into BioBrick standard biological parts. </p>
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<div class="column full_size">
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<div class="highlight decoration_background">
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<h3>Note</h3>
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<p>This page should list all the basic parts your team has made during your project. You must add all characterization information for your parts on the Registry. You should not put characterization information on this page. Remember judges will only look at the first part in the list for the Best Basic Part award, so put your best part first!</p>
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<div class="column full_size">
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<h3>Best Basic Part Special Prize</h3>
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<p> To be eligible for this award, this part must adhere to <a href="http://parts.igem.org/DNA_Submission">Registry sample submission guidelines</a> and have been sent to the Registry of Standard Biological Parts. If you have a part you wish to nominate your team for this <a href="https://2018.igem.org/Judging/Awards">special prize</a>, make sure you add your part number to your <a href="https://2018.igem.org/Judging/Judging_Form">judging form</a> and delete the box at the top of this page.
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<br><br>
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<b>Please note:</b> Judges will only look at the first part number you list, so please only enter ONE (1) part number in the judging form for this prize. </p>
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    <title>Team:XMU-China/Measurement - 2018.igem.org</title>
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                            <a href="#" target="_blank">Project</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Description">Description</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Design">Design</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Demonstrate">Demonstrate</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Results">Results</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Parts">Parts</a></li>
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                            </ul>
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                    </ul>
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                        <li class="Hardware">
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                            <a href="#">Hardware</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware">Overview</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware/Microfluidic_Chips">Microfluidic chips</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware/Fluorescenc_Detection">Fluorescence Detection</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware/Straberry_Pi">Straberry Pi</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Applied_Design">Applied Design</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Software">APP</a></li>
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                            </ul>
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                        </li>
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                        <li class="Model">
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                            <a href="#">Model</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Model">Overview</a></li>
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                            </ul>
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                        </li>
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                        <li class="Human_Practice">
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                            <a href="#">Human Practice</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Te
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                                am:XMU-China/Human_Practices">Overview</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/HP/Silver">Silver</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/HP/Gold_Integrated">Gold</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Public_Engagement">Engagement</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Collaborations">Collaborations</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Entrepreneurship">Entrepreneurship</a></li>
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                            </ul>
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                        </li>
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                        <li class="Other_Works">
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                            <a href="#">Other Works</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/InterLab">InterLab</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Improve">Improve</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Safety">Safety</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Measurement">Measurement</a></li>
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                            </ul>
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                        </li>
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                        <li class="Notebook">
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                            <a href="#">Notebook</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Experiments">Experiments</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Engineering">Engineering</a></li>
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                            </ul>
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                        <li class="Team">
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                            <a href="#">Team</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Team">Members</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Attributions">Attributions</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Judging">Judging</a></li>
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                            </ul>
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                <div id="Team">
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                    <div class="nav-word">Team</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Team">Members</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Attributions">Attributions</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Judging">Judging</a></li>
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                    </ul>
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                <div id="Notebook">
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                        <div class="nav-word">Notebook</a></div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Experiments">Experiments</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Engineering">Engineering</a></li>
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                    </ul>
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                </div>
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                <div id="Other_Works">
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                    <div class="nav-word">Other Works</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/InterLab">InterLab</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Improve">Improve</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Safety">Safety</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Measurement">Measurement</a></li>
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                    </ul>
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                </div>
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                <div id="Human_Practice">
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                    <div class="nav-word">Human Practice</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Human_Practices">Overview</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/HP/Silver">Silver</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/HP/Gold_Integrated">Gold</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Public_Engagement">Engagement</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Collaborations">Collaborations</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Entrepreneurship">Entrepreneurship</a></li>
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                    </ul>
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                </div>
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                <div id="Model">
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                    <div class="nav-word">Model</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Model">Overview</a></li>
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                    </ul>
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                </div>
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                <div id="Hardwork">
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                    <div class="nav-word">Hardwork</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware">Overview</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware/Microfluidic_Chips">Microfluidic chips</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware/Fluorescenc_Detection">Fluorescence Detection</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware/Straberry_Pi">Straberry Pi</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Applied_Design">Applied Design</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Software">APP</a></li>
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                    </ul>
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                </div>
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                <div id="Project">
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                    <div class="nav-word">Project</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Description">Description</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Design">Design</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Demonstrate">Demonstrate</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Results">Results</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Parts">Parts</a></li>
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                    </ul>
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                </div>
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                <div id="jiannan">
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                    <a href="https://2018.igem.org/Team:XMU-China">
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                        <img src="https://static.igem.org/mediawiki/2018/6/6f/T--XMU-China--jiannanlogo.png">
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        <div class="description_banner">
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            <div class="word">Basic Parts</div>
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        <!-- <nav class="Quick-navigation">
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            <div class="Quick-navigation_word">
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                <a href="#Cell_Measurement" class="Quick-navigation-item">
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                    <img id="turn_img" src="https://static.igem.org/mediawiki/2018/5/50/T--XMU-China--right51.png">
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                    <a href="#Cell_Measurement"id="Quick_A">Cell Measurement</a></a>
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                    <img id="turn_img" src="https://static.igem.org/mediawiki/2018/0/04/T--XMU-China--right52.png">
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                    <a href="#Colony_Forming_Units" id="Quick_B">Colony Forming Units</a></a>
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                    <img id="turn_img" src="https://static.igem.org/mediawiki/2018/d/d0/T--XMU-China--right53.png">
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                    <a href="#Experience_and_Discussion" id="Quick_C">Experience and Discussion</a></a>
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            <section id="Basic_Parts" class="js-scroll-step">
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                <div class="headline">
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                    Basic Parts
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                </div>
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                <p class="indent">This year we have designed eleven basic parts mostly from TDP protein systems and Kai ABC systems. <span><a class="click_here" href="http://parts.igem.org/Part:BBa_K2623008">BBa_K2623008</a></span> is our favorite basic part, which is the core part of the TDP circuit. This part contains the coding region of the Hypsibius dujardini (Water bear) (Macrobiotus dujardini) CAHS gene. Cytosolic abundant heat soluble proteins acts as a molecular shield in water-deficient condition. Tardigrade-specific intrinsically disordered proteins (TDPs) are essential for desiccation tolerance by forming non-crystalline amorphous solids upon desiccation, and this vitrified state mirrors their protective capabilities.
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                </p>
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                <div class="table_container">
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                <table class="table">
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                    <tr>
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                        <th>Favorite</th>
 +
                        <th>Register Name</th>
 +
                        <th>Code used in Lab</th>
 +
                        <th>Description</th>
 +
                        <th>Types</th>
 +
                        <th>Lenth</th>
 +
                        <th>Designer</th>
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                    </tr>
 +
                    <tr>
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                        <td>R</td>
 +
                        <td><a href="http://parts.igem.org/Part:BBa_K2623008">BBa_K2623008</a></td>
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                        <td>CAHS</td>
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                        <td>CAHS coding region</td>
 +
                        <td>Coding</td>
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                        <td>714 bp</td>
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                        <td>Weizhao Li</td>
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                    </tr>
 +
                    <tr>
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                        <td></td>
 +
                        <td><a href="http://parts.igem.org/Part:BBa_K2623001">BBa_K2623001</a></td>
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                        <td>KaiA</td>
 +
                        <td>KaiA coding region</td>
 +
                        <td>Coding</td>
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                        <td>852 bp</td>
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                        <td>Yi Lin</td>
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                    </tr>
 +
                    <tr>
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                        <td></td>
 +
                        <td><a href="http://parts.igem.org/Part:BBa_K2623002">BBa_K2623002</a></td>
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                        <td>KaiB</td>
 +
                        <td>KaiB coding region</td>
 +
                        <td>Coding</td>
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                        <td>309 bp</td>
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                        <td>Yuhan Qin</td>
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                    </tr>
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                    <tr>
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                        <td></td>
 +
                        <td><a href="http://parts.igem.org/Part:BBa_K2623003">BBa_K2623003</a></td>
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                        <td>KaiC</td>
 +
                        <td>KaiC coding region</td>
 +
                        <td>Coding</td>
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                        <td>1560 bp</td>
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                        <td>Xinyi Ren</td>
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                    </tr>
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                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623004">BBa_K2623004</a></td>
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                        <td>SasA</td>
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                        <td>SasA coding region</td>
 +
                        <td>Coding</td>
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                        <td>1167 bp</td>
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                        <td>Yi Lin</td>
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                    </tr>
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                    <tr>
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                        <td></td>
 +
                        <td><a href="http://parts.igem.org/Part:BBa_K2623005">BBa_K2623005</a></td>
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                        <td>CikA</td>
 +
                        <td>CikA coding region</td>
 +
                        <td>Coding</td>
 +
                        <td>2265 bp</td>
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                        <td>Yuhan Qin</td>
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                    </tr>
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                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623006">BBa_K2623006</a></td>
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                        <td>RpaA</td>
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                        <td>RpaA coding region</td>
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                        <td>Coding</td>
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                        <td>753 bp</td>
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                        <td>Xinyi Ren</td>
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                    </tr>
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                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623007">BBa_K2623007</a></td>
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                        <td>SAHS</td>
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                        <td>SAHS coding region</td>
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                        <td>Coding</td>
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                        <td>510 bp</td>
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                        <td>Yingming Zhu</td>
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                    </tr>
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                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623009">BBa_K2623009</a></td>
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                        <td>pKaiBC</td>
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                        <td>pKaiBC promoter</td>
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                        <td>Regulatory</td>
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                        <td>89 bp</td>
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                        <td>Gezhi Xiao</td>
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                    </tr>
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                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623040">BBa_K2623040</a></td>
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                        <td>OmpA leader</td>
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                        <td>OmpA leader sequence </td>
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                        <td>Coding</td>
 +
                        <td>72 bp</td>
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                        <td>Niangui Cai</td>
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                    </tr>
 +
                    <tr>
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                        <td></td>
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                        <td><a href="http://parts.igem.org/Part:BBa_K2623027">BBa_K2623027</a></td>
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                        <td>NG7</td>
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                        <td>siRNA with C/D<sub>box</sub> RNA structure to bind with L7Ae (<a href="http://parts.igem.org/Part:BBa_K2623026">BBa_K2623026</a>)</td>
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                        <td>Composite</td>
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                        <td>1447 bp</td>
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                        <td>Yunyun Hu</td>
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                    </tr>
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                </table>
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                </div>
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                    <li>Home</li>
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                    <li>Basic Part</li>
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                    <li>About us</li>
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Latest revision as of 09:11, 17 October 2018

Team:XMU-China/Measurement - 2018.igem.org

Basic Parts
Basic Parts

This year we have designed eleven basic parts mostly from TDP protein systems and Kai ABC systems. BBa_K2623008 is our favorite basic part, which is the core part of the TDP circuit. This part contains the coding region of the Hypsibius dujardini (Water bear) (Macrobiotus dujardini) CAHS gene. Cytosolic abundant heat soluble proteins acts as a molecular shield in water-deficient condition. Tardigrade-specific intrinsically disordered proteins (TDPs) are essential for desiccation tolerance by forming non-crystalline amorphous solids upon desiccation, and this vitrified state mirrors their protective capabilities.

Favorite Register Name Code used in Lab Description Types Lenth Designer
R BBa_K2623008 CAHS CAHS coding region Coding 714 bp Weizhao Li
BBa_K2623001 KaiA KaiA coding region Coding 852 bp Yi Lin
BBa_K2623002 KaiB KaiB coding region Coding 309 bp Yuhan Qin
BBa_K2623003 KaiC KaiC coding region Coding 1560 bp Xinyi Ren
BBa_K2623004 SasA SasA coding region Coding 1167 bp Yi Lin
BBa_K2623005 CikA CikA coding region Coding 2265 bp Yuhan Qin
BBa_K2623006 RpaA RpaA coding region Coding 753 bp Xinyi Ren
BBa_K2623007 SAHS SAHS coding region Coding 510 bp Yingming Zhu
BBa_K2623009 pKaiBC pKaiBC promoter Regulatory 89 bp Gezhi Xiao
BBa_K2623040 OmpA leader OmpA leader sequence Coding 72 bp Niangui Cai
BBa_K2623027 NG7 siRNA with C/Dbox RNA structure to bind with L7Ae (BBa_K2623026) Composite 1447 bp Yunyun Hu
  • Home
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  • Description
  • Experiment