Difference between revisions of "Team:XMU-China/Safety"

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    <title>Team:XMU-China/Safety - 2018.igem.org</title>
  
<div class="column full_size">
 
  
<h1> Safety </h1>
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    <link rel="stylesheet" href="css/safety.css">
<p>Please visit the <a href="https://2018.igem.org/Safety">Safety Hub</a> to find this year's safety requirements & deadlines, and to learn about safe & responsible research in iGEM.</p>
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<p>On this page of your wiki, you should write about how you are addressing any safety issues in your project. The wiki is a place where you can <strong>go beyond the questions on the safety forms</strong>, and write about whatever safety topics are most interesting in your project. (You do not need to copy your safety forms onto this wiki page.)</p>
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<div id="container">
</div>
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        <header>
 
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            <div class="wrapper cf">
 
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                <nav id="main-nav">
<div class="column two_thirds_size">
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                    <ul class="first-nav">
<h3>Safe Project Design</h3>
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                        <li class="Project">
 
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                            <a href="#" target="_blank">Project</a>
<p>Does your project include any safety features? Have you made certain decisions about the design to reduce risks? Write about them here! For example:</p>
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                            <ul>
 
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Description">Description</a></li>
<ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Design">Design</a></li>
<li>Choosing a non-pathogenic chassis</li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Results">Results</a></li>
<li>Choosing parts that will not harm humans / animals / plants</li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Demonstrate">Demonstrate</a></li>
<li>Substituting safer materials for dangerous materials in a proof-of-concept experiment</li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Parts">Parts</a></li>
<li>Including an "induced lethality" or "kill-switch" device</li>
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                            </ul>
</ul>
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                        </li>
 
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                    </ul>
</div>
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                    <ul class="second-nav">
 
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                        <li class="Hardware">
<div class="column third_size">
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                            <a href="#">Hardware</a>
<h3>Safe Lab Work</h3>
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                            <ul>
 
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware">Overview</a></li>
<p>What safety procedures do you use every day in the lab? Did you perform any unusual experiments, or face any unusual safety issues? Write about them here!</p>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Microfluidic_Chips">Microfluidic Chips</a></li>
 
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Fluorescence_Detection">Fluorescence Detection</a></li>
 
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Raspberry_Pi">Raspberry Pi</a></li>
<h3>Safe Shipment</h3>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Application">Application</a></li>
 
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Software">Software</a></li>
<p>Did you face any safety problems in sending your DNA parts to the Registry? How did you solve those problems?</p>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Applied_Design">Product Design</a></li>
</div>
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                            </ul>
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                        </li>
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                        <li class="Model">
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                            <a href="#">Model</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Model#Summary">Summary</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Model#Thermodynamic_model">Thermodynamic Model</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Model#Fluid_dynamics_model">Fluid dynamics Model</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Model#Molecular_docking_model">Molecular Docking Model</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Model#The_dynamic_model">Derivation of Rate Equation</a></li>
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                            </ul>
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                        </li>
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                        <li class="Human_Practice">
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                            <a href="#">Social Works</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Human_Practices">Human Practice</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Public_Engagement">Engagement</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Collaborations">Collaborations</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Entrepreneurship">Entrepreneurship</a></li>
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                            </ul>
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                        </li>
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                        <li class="Other_Works">
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                            <a href="#">Other Works</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/InterLab">InterLab</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Improve">Improve</a></li>
 +
                                <li><a href="https://2018.igem.org/Team:XMU-China/Safety">Safety</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Measurement">Measurement</a></li>
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                            </ul>
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                        </li>
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                        <li class="Notebook">
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                            <a href="#">Notebook</a>
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                            <ul>
 +
                                <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
 +
                                <li><a href="https://2018.igem.org/Team:XMU-China/Experiments">Experiments</a></li>
 +
                                <li><a href="https://2018.igem.org/Team:XMU-China/Engineering">Engineering</a></li>
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                            </ul>
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                        </li>
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                        <li class="Team">
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                            <a href="#">Team</a>
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                            <ul>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Team">Members</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Attributions">Attributions</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/Judging">Judging</a></li>
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                                <li><a href="https://2018.igem.org/Team:XMU-China/After_iGEM">After iGEM</a></li>
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                            </ul>
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                        </li>
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                <div id="Team">
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                    <div class="nav-word">Team</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Team">Members</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Attributions">Attributions</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Judging">Judging</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/After_iGEM">After iGEM</a></li>
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                    </ul>
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                </div>
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                <div id="Notebook">
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                    <div class="nav-word">Notebook</div>
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                    <ul>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Experiments">Experiments</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Engineering">Engineering</a></li>
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                    </ul>
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                </div>
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                <div id="Other_Works">
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                    <div class="nav-word">Other Works</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/InterLab">InterLab</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Improve">Improve</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Safety">Safety</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Measurement">Measurement</a></li>
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                    </ul>
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                </div>
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                <div id="Human_Practice">
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                    <div class="nav-word">Social Works</div>
 +
                    <ul>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Human_Practices">Human Practice</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Public_Engagement">Engagement</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Collaborations">Collaborations</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Entrepreneurship">Entrepreneurship</a></li>
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                    </ul>
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                </div>
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                <div id="Model">
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                    <div class="nav-word">Model</div>
 +
                    <ul>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Model">Summary</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Model#Thermodynamic_model">Thermodynamic Model</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Model#Fluid_dynamics_model">Fluid dynamics Model</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Model#Molecular_docking_model">Molecular Docking Model</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Model#The_dynamic_model">Derivation of Rate Equation</a></li>
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                    </ul>
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                </div>
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                <div id="Hardwork">
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                    <div class="nav-word">Hardware</div>
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                    <ul>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware">Overview</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Microfluidic_Chips">Microfluidic Chips</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Fluorescence_Detection">Fluorescence Detection</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Raspberry_Pi">Raspberry Pi</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Hardware#Application">Application</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Software">Software</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Applied_Design">Product Design</a></li>
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                    </ul>
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                </div>
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                <div id="Project">
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                    <div class="nav-word">Project</div>
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                    <ul>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Description">Description</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Design">Design</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Results">Results</a></li>
 +
                        <li><a href="https://2018.igem.org/Team:XMU-China/Demonstrate">Demonstrate</a></li>
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                        <li><a href="https://2018.igem.org/Team:XMU-China/Parts">Parts</a></li>
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                    </ul>
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                </div>
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                    Safe Project Design
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                </div>
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                <P>Firstly, we use <i>E.coli</i> as our chassis organisms and do not use any other organism. <i>E.coli</i> DH5α, BL21 and BL21(DE3) were the only chassis when we performed the molecular cloning and expression. All the plasmids are harmless for humans and none of our parts would raise any safety issue according to the current expertise. In order to overcome the deficiencies of traditional detection methods, we have developed an Aptamer Based Cell-free Detection system of protein (ABCD system). We used the aptamer SYL3C against EpCAM, an epithelial cell adhesion molecule that is highly expressed on the surface of adenocarcinoma cells. After protein detection, we use outer-membrane vesicles  (OMVs) to treat the diseased cells. For the sake of allowing our detection and treatment system to function in reality, we designed KaiABC system and TDPs system to regulate the expression rate of OMVs and store fragile chemicals or biological materials.</P>
 +
                <p class="F1">
 +
                    <img src="https://static.igem.org/mediawiki/2018/5/5d/T--XMU-China--safety1.JPG">
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                </p>
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            </section>
 +
            <section id="Safe_Lab_Work" class="js-scroll-step">
 +
                <div class="headline">
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                    Safe Lab Work
 +
                </div>
 +
                <p>The building of laboratory include the location of emergency exits, emergency ventilation system, fire-fighting equipment, first aid kit and so on. Every year after recruiting new members, we spend a semester training them in basic laboratory operations and handling safety accidents. Laboratory coat and gloves are necessary when entering the laboratory. All culture fluid and culture medium with bacteria were processed properly to prevent the potential biological pollution. We handled all the biological materials, wastes and equipments strictly following the BSL-1 requirements, our lab is also equipped with professional operators of dangerous goods and waste biological products, they will disposal all the waste properly. We turn off the water and electricity, close window and door when we leave the lab.
 +
                </p>
 +
                <p>At the same time, we invited laboratory safety engineer, <strong>Wenyao Shao</strong>,to join our team as an advisor and to conduct safety education for all team members when they officially entered the experimental phase consistently.
 +
                </p>
 +
                <p class="F1"><img src="https://static.igem.org/mediawiki/2018/a/ab/T--XMU-China--safety3.JPG"></p>
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                <div class="headline">
 +
                    Safety Shipment
 +
                </div>
 +
                <p>We always followed iGEM shipment requirements when sending our DNA parts to the Registry.</p>
 +
            </section>
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Latest revision as of 02:05, 18 October 2018

Team:XMU-China/Safety - 2018.igem.org

Safety
Safe Project Design

Firstly, we use E.coli as our chassis organisms and do not use any other organism. E.coli DH5α, BL21 and BL21(DE3) were the only chassis when we performed the molecular cloning and expression. All the plasmids are harmless for humans and none of our parts would raise any safety issue according to the current expertise. In order to overcome the deficiencies of traditional detection methods, we have developed an Aptamer Based Cell-free Detection system of protein (ABCD system). We used the aptamer SYL3C against EpCAM, an epithelial cell adhesion molecule that is highly expressed on the surface of adenocarcinoma cells. After protein detection, we use outer-membrane vesicles (OMVs) to treat the diseased cells. For the sake of allowing our detection and treatment system to function in reality, we designed KaiABC system and TDPs system to regulate the expression rate of OMVs and store fragile chemicals or biological materials.

Safe Lab Work

The building of laboratory include the location of emergency exits, emergency ventilation system, fire-fighting equipment, first aid kit and so on. Every year after recruiting new members, we spend a semester training them in basic laboratory operations and handling safety accidents. Laboratory coat and gloves are necessary when entering the laboratory. All culture fluid and culture medium with bacteria were processed properly to prevent the potential biological pollution. We handled all the biological materials, wastes and equipments strictly following the BSL-1 requirements, our lab is also equipped with professional operators of dangerous goods and waste biological products, they will disposal all the waste properly. We turn off the water and electricity, close window and door when we leave the lab.

At the same time, we invited laboratory safety engineer, Wenyao Shao,to join our team as an advisor and to conduct safety education for all team members when they officially entered the experimental phase consistently.

Safety Shipment

We always followed iGEM shipment requirements when sending our DNA parts to the Registry.