Team:NYMU-Taipei/experimentsandresults




Protocols


E.coli Protocols

Two-day Efficient Cloning Cycle

We used an efficient two day cloning cycle split into a "Light" day and a "Heavy" day.

Light Day

The light day consists of Colony PCR and liquid culture of colonies transformed from a previous day.

  1. The 3-in-1

    First, count the number of colonies you want to check. Then, do the following 3 things sequentially:

    • Liquid culture
    • 2nd time plate
    • Colony PCR

    (Use the same tip to add the template to these three things)

  2. Make The Gel For Electrophoresis
  3. Run Gel Electrophoresis To Check The Colony PCR Product

Heavy Day

The heavy day consists of:

  1. Previously grown plasmid extraction
  2. Plasmid PCR
  3. Gel extraction
  4. Digestion
  5. Ligation
  6. Transformation

Colony PCR (Thermo DreamTaq®)

  1. Make the Colony PCR mix (we use Thermo' DreamTaq) with the mix amount slightly modified:
    Item uL
    Primer(Forward and reverse) 1
    dNTP (10mM) 1
    10x DreamTaq buffer 5
    Taq Polymerase 0.2
    ddH20 42.8
    Total 50
  2. Select a colony using a tip or toothpick.
  3. Dip it in a PCR tube and swirl it around.

    PCR run protocol

    Temperature Time  
    94℃ 60s  
    94℃ 15s  
    55℃ 20s 30-35 cycles
    72℃ 1kb/min + 5-10s  
    72℃ 300s  
Plasmid Extraction
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Plasmid Extraction
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Plasmid Extraction
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