Difference between revisions of "Team:Lambert GA/InterLab"

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<h1>InterLab</h1>
 
<h1>InterLab</h1>
 
<h3>Bronze Medal Criterion #4</h3>
 
<h3>Bronze Medal Criterion #4</h3>
<p><b>Standard Tracks:</b> Participate in the Interlab Measurement Study and/or obtain new, high quality experimental characterization data for an existing BioBrick Part or Device and enter this information on that part's Main Page in the Registry. The part that you are characterizing must NOT be from a 2018 part number range.
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<p>A critical component of measurement and modeling in synthetic biology involves standardization of values to ensure accurate conversion and comparison of data between different experiments for validation. Reproducibility has therefore become a necessity for confirmation of results in various experiments, as well as providing a sufficient standard of comparison. The InterLab study aims to address this goal through the characterization of the Green Fluorescent Protein (GFP) with studies conducted by labs across the world. As GFP is utilized as an almost universal reporter in experiments, it is crucial for standardizing fluorescence values for comparison. Lambert iGEM shares this vision of reproducibility in synthetic biology, and participated in the InterLab to help achieve this goal.
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For teams participating in the <a href="https://2018.igem.org/Measurement/InterLab">InterLab study</a>, all work must be shown on this page.
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In the spirit of collaboration, we worked with the University of Georgia iGEM Team to conduct our experiments and compare results in order to optimize protocols and recognize changes that can be made to ensure increased reproducibility. We performed our experiments and obtained measurements in tandem to limit variables, and analyzed our measurement curves to compare differences. One of the critical components we realized affected the measurements was reconstitution of the particle solution and the time the particles were allowed to settle. We resuspended the particles after obtaining plate reader data indicating that was the factor affecting the values. Throughout this experience, we have learned the critical need for reproducibility and hope to pursue future opportunities with the InterLab study!
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Revision as of 16:55, 16 October 2018

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InterLab

Bronze Medal Criterion #4

A critical component of measurement and modeling in synthetic biology involves standardization of values to ensure accurate conversion and comparison of data between different experiments for validation. Reproducibility has therefore become a necessity for confirmation of results in various experiments, as well as providing a sufficient standard of comparison. The InterLab study aims to address this goal through the characterization of the Green Fluorescent Protein (GFP) with studies conducted by labs across the world. As GFP is utilized as an almost universal reporter in experiments, it is crucial for standardizing fluorescence values for comparison. Lambert iGEM shares this vision of reproducibility in synthetic biology, and participated in the InterLab to help achieve this goal.

In the spirit of collaboration, we worked with the University of Georgia iGEM Team to conduct our experiments and compare results in order to optimize protocols and recognize changes that can be made to ensure increased reproducibility. We performed our experiments and obtained measurements in tandem to limit variables, and analyzed our measurement curves to compare differences. One of the critical components we realized affected the measurements was reconstitution of the particle solution and the time the particles were allowed to settle. We resuspended the particles after obtaining plate reader data indicating that was the factor affecting the values. Throughout this experience, we have learned the critical need for reproducibility and hope to pursue future opportunities with the InterLab study!