Difference between revisions of "Team:Lambert GA/Attributions"

Revision as of 00:20, 18 October 2018

A T T R I B U T I O N S

Researchers

Abby Bell Wet Lab	Annie Pei Human Practices	Ashtyn Cauffman Human Practices	Christina Lee Human Practices
Courtney Taing Human Practices	Ellie Kim Wet Lab	Gaurav Byagathvalli ElectroPen	Katie Barr Wet Lab
Kevin Li Wiki	Krishi Kishore Software	Megan Hong Wet Lab	Michelle Wu Human Practices
Nithik Balachandran Wiki	Rohil Badkundri CALM	Sahil Jain Software	Sai Mettupalli Software
Shanthi Hegde Graphic Design	Srikusumanjali Pinnamareddy CALM	Tapasya Katta Human Practices	Victor Valbuena CALM

Project Foundation

This year's project toehold switch circuit design was a result of collaborative discussions with Dr. Styczysnki, Ms. Zhang and Ms. McNerney from Georgia Institute of Technology. Lambert iGEM worked extensively with third parties for this year's project, and we would like to offer our most sincere thanks for their help. Attributions are listed below by subproject.

Support

Scientific

Dr. Mark Styczynski from Georgia Institute of Technology
Dr. Saad Bhamla from Georgia Institute of Technology
Ms. Yan Zhang from Georgia Institute of Technology
Ms. Monica McNerney from Georgia Institute of Technology

Dr. Styczynski, Dr. Bhamla, Ms. Zhang and Ms. McNerney have assisted Lambert iGEM throughout their project by acting as mentors. They have helped the team troubleshoot and revise its project, constantly providing advice to improve it. In addition, they have generously provided materials that a high school team would not have access to. We would like to thank them for helping us complete our project.

Parts

Sequences and initial DNA from Styczynski Lab at Georgia Tech
Snapgene- software for sequence analysis
IDT-Generous DNA synthesis

CALM Model

The AI Day One Challenge, coordinated by Mr. Scott Henderson through Sandbox ATL, also allowing Lambert iGEM to meet with the following:
Mr. Luigi Ray-Montanez
Mr. Jackson Morgan
Mr. TJ Muehlemen
Mr. Shane Matthews
Mr. Michael Koohang
Mr. Chris Waites
Mrs. Alexa Morse
Mr. Greg Torre
Mr. Daniel Youmans
Mrs. Winne Luo
Special thanks to Tanishk Sinha (a student at Lambert High School) for his contributions and assistance to the model.

ElectroPen

The ElectroPen project would not have been possible without our collaboration with the Bhamla Lab at the Georgia Institute of Technology:
Dr. Saad Bhamla
Soham Sinha

Advisor

Mrs. Standeven
Dr. Cantrell

Outreach

Dr. Rainyer- Dominican Republic
Girl Scout Troops
Riverwatch and South Forsyth Middle Schools
Atlanta Science Festival
University of Georgia (UGA) iGEM Team
Georgia State University (GSU) iGEM
Emory University iGEM
TASTaipei iGEM

Community

Open House- local business owners and professionals
Lambert Administrators and teachers
Dr. Christian Epe, Dr. Sammy Bell, Dr. Marcus Terneus, Dr. Dave Lowery, Dr. Tong and Boeheim Ingelheim Animal Health R&D

Fundraising

National Science Foundation Grant #1254382
Johns Creek Chipotle

Presentation

Dr. Christian Epe, Dr. Sammy Bell, Dr. Marcus Terneus, Dr. Dave Lowery, and Dr. Tong from Boeheim Ingelheim
Mike Gibson from Gibson Software
Mark Styzinski, Yan Zhang, and Saad Bhamla from Georgia Tech
Paul Standeven from Philips Healthcare USA
Dr. Dana Boyd Barr, Dr. P. Barry Ryan, Dr. Christine L Moe, and Dr. Parinya Panuwet from Emory Healthcare
Dr. Davidson

References

[1] Wholey, W. Y., & Jakob, U. (2012, March). Hsp33 confers bleach resistance by protecting elongation factor Tu against oxidative degradation in Vibrio cholerae. Retrieved October 8, 2018, from https://www.ncbi.nlm.nih.gov/pubmed/22296329
[2] Cholera - Vibrio cholerae infection. (2018, July 20). Retrieved October 8, 2018, from https://www.cdc.gov/cholera/diagnosis.html
[3] Nelson, E. J., Harris, J. B., Morris, J. G., Calderwood, S. B., & Camilli, A. (2009, October). Cholera transmission: The host, pathogen and bacteriophage dynamic. Retrieved October 8, 2018, from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3842031/
[4] Kaye N. Ballantyne, Renato Salemi, Fabio Guarino, James R. Pearson, Dale Garlepp, Stephen Fowler & Roland A.H. van Oorschot (2015) DNA contamination minimisation – finding an effective cleaning method, Australian Journal of Forensic Sciences, 47:4, 428-439, DOI: 10.1080/00450618.2015.1004195
[5] 10.3 - Sensitivity, Specificity, Positive Predictive Value, and Negative Predictive Value. (2018). Retrieved October 8, 2018, from https://onlinecourses.science.psu.edu/stat507/node/71/
[6] Cholera - Vibrio cholerae infection. (2018, July 20). Retrieved from https://www.cdc.gov/cholera/diagnosis.html
[7] Nelson, E. J., Harris, J. B., Morris, J. G., Calderwood, S. B., & Camilli, A. (2009, October). Cholera transmission: The host, pathogen and bacteriophage dynamic. Retrieved October 8, 2018, from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3842031/
[8] Bjerketorp, J., Håkansson, S., Belkin, S., & Jansson, J. K. (2006, February). Advances in preservation methods: Keeping biosensor microorganisms alive and active. Retrieved October 8, 2018, from https://www.ncbi.nlm.nih.gov/pubmed/16368231
[9] EXAMINATION OF FOOD AND ENVIRONMENTAL SAMPLES [PDF]. (n.d.). Centers for Disease Control.London School of Hygiene & Tropical Medicine. (2018, May 03). Upcoming rainy season likely to trigger renewed cholera outbreak in Yemen. Retrieved from https://www.lshtm.ac.uk/newsevents/news/2018/upcoming-rainy-season-likely-trigger-renewed-cholera-outbreak-yemen
[10] Drinking-water. (2018, February 7). Retrieved from http://www.who.int/news-room/fact- sheets/detail/drinking-water (n.d.). Retrieved from http://www.who.int/water_sanitation_health/takingcharge.html
[11] Berman, J. (2009, October 29). WHO: Waterborne Disease is World's Leading Killer. Retrieved from https://www.voanews.com/a/a-13-2005-03-17-voa34-67381152/274768.html
[12] Learn How to Use the Crystal VC Dipstick Test to Detect Vibrio Cholera in Our New Video | DOVE: Stop Cholera. (n.d.). Retrieved from https://www.stopcholera.org/blog/learn-how-use-crystal-vc-dipstick-test-detect-vibrio-cholera-our-new-video
[13] Cholera - Vibrio cholerae infection. (2018, May 14). Retrieved from https://www.cdc.gov/cholera/diagnosis.html
[14]The Burden of Soil-transmitted Helminths (STH). (2011, June 06). Retrieved from https://www.cdc.gov/globalhealth/ntd/diseases/sth_burden.html
[15] Water. (2016, April 22). Retrieved from https://www.cdc.gov/parasites/water.html
[16] Collender, P. A., Kirby, A. E., Addiss, D. G., Freeman, M. C., & Remais, J. V. (2015, December). Retrieved from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4679500/
[17] Action Against Worms. (2008, February). Retrieved from http://www.who.int/neglected_diseases/preventive_chemotherapy/pctnewsletter11.pdf
[18] Pilotte, N., Papaiakovou, M., Grant, J. R., Bierwert, L. A., Llewellyn, S., McCarthy, J. S., & Williams, S. A. (n.d.). Improved PCR-Based Detection of Soil Transmitted Helminth Infections Using a Next-Generation Sequencing Approach to Assay Design. Retrieved from http://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0004578
[19] Detection of Cholera Toxin [PDF]. (n.d.). Atlanta: Centers for Disease Control and Prevention. https://www.cdc.gov/cholera/pdf/laboratory-methods-for-the-diagnosis-of-vibrio-cholerae-chapter-7.pdf

@@ Line 339: / Line 339: @@
 <br>
 <ul>
-<li>The AI Day One Challenge, coordinated by Mr. Scott Henderson through Sandbox ATL, also allowing Lambert iGEM to meet with the following;</li>
+<li>The AI Day One Challenge, coordinated by Mr. Scott Henderson through Sandbox ATL, also allowing Lambert iGEM to meet with the following:</li>
 <li>Mr. Luigi Ray-Montanez</li>
 <li>Mr. Jackson Morgan</li>
@@ Line 351: / Line 351: @@
 <li>Mrs. Winne Luo</li>
 <li>Special thanks to Tanishk Sinha (a student at Lambert High School) for his contributions and assistance to the model.
+</ul>
+<br><br>
+<b style="font-size:20px;">ElectroPen</b>
+<br>
+<ul>
+<li>The ElectroPen project would not have been possible without our collaboration with the Bhamla Lab at the Georgia Institute of Technology:</li>
+<li>Dr. Saad Bhamla</li>
+<li>Soham Sinha</li>
 </ul>